Information report for BnaC06G0238400ZS
Gene Details
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Functional Annotation
- Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.
Homologous
- Brassica oleracea: Bo6g079740, Bo4g098350, Bo8g098290
- Brassica rapa: Bra003518, Bra007720
- Glycine max: Glyma.10G021500
- Juglans regia: Jr08_12700
- Manihot esculenta: MANES_05G067800, MANES_01G214300
- Prunus avium: Pav_sc0000848.1_g430.1.mk
- Prunus persica: PRUPE_8G253300
- Rosa chinensis: RchiOBHm_Chr6g0292661
- Sesamum indicum: SIN_1012796
Sequences
gDNA Sequence
- >BnaC06G0238400ZS
TCCAAATAATTAGAGCAGTTACATTTTTGACATTATTTTCTTTTACAAAAATATCTGAACATCATCCTCTGAAGAAAATAATACCCTAACCAGTAAGTAGACAAACAAACATACAACAATATATATAAAGGTCTCTTGGAACCTCTCGGATCCTCTCTTTTCCTCTTACTCGTTGCTCATGAGCTAGGTTGTTATATGAAGCAGCCCCAGAAATAAACTAATGAAGGCCAACCCCTCTTTCTCTCCCATGTTCCTAAACTGGAACGATTTATATGGGGAGATGATGAGCAAGGATTTAATGAAAGAATGTAGCTCGTTTAGTTTTTCGTTAAACACTCATTGATGACTGTTGGTCCATGTTCCAGACGAAGTCAGGCATGTCAAACCGAGGACCCGCTACTGTTCGGTATATAAACACTCTCTCAACAGGGCAGCTCTCAGGTCTCGAGTCAGGTGGACCCCGCTCATCGATGACTTCCACATTGAGCTTTGGCATCTTCTGTCCTAATAACTTACAGGCTCCAAAACTCACGGAACAAGAAGACATCCAAAGAGATCGCATTGTCTCCAGCTTCGAAGCACTGGCCAATAGCGCCTTGTCTCCAAACGGGCAGTCCCTTATCTCTAGTTTCCTCAGGCTATCGCACCCTGACAAAACATGATGCATTCCTAAGTCACTGTCTCCTGCAAACGCCACGGAGAGCATTTCCATCTTCTTTGCATACTTCCCAATGTATTCGAAAACCTTGTCGGTCAGGAGCCCTGATAAGGAGAGCCGCCGGAGATCTTTGCAGTGCTCTACTATGGCTCCGAAACCCACATCAAGTGGCTCTAGTGTTAGATGGTCAGGGGCTTTCGGCTCAATGATGCACAAACGGAAGCGAGTCATGTTGGGACGGTTCCTAGCAATGGTTACTAACGCATCATTGGTCATTTGACGGCAAAAGTAGAGAACAGACTCGAGCTTTGGACAGCCCGCGGAGACGGAGACAAGCCCCTGTTCCGTCAATGCGACGTTTGGCTCCATGACAAAAGGCTCAGACGGAAACACTCTCAACTCTCTAAGGTCCTTGCAGGTTGAAGCAAGCACCTCAAGACCAGCATCCTCAATATAGTCCAGCACCTGTGTCAATAAGTCATATTATCACAATTAAAGATAAGGTTGGCCTTGAAGCATATTGTTACAGTAAACTATTCACGTTAAAGTGGACTAACCCAGAGGCGCTGCAATTTAGGACAAAGGGTAATAAGCTTGACAAGATCATAGCTCTGGACAGTTGCATAACTCAGGTTCAAAGTTGTAAGCCGACCGCAAACAGAATAAACAGCTGGAAGATAGGCAGGAGCAGCATCCCAAAGCCCAGATAAGCACTTCAACTTCTTGCACCCAGAGAGAGCTACATATAAATCATTAAACAAATCTGAACGCACATCAGCAGTGTAGCCACCGGTGCCCAATTCCTCCAGCTGAGGTGCTCTTCGAAGCAAAGAAGCCAATTTTTCAAGAGGAACGGCTCGGTTAAGCTTGAGAGACTTGAGATTGGGACACCTACTCACCAGCCTCTCCAGAGCAGAGAAACATACATCGGAGGCCAAGCAAGAGATGTTGAGTGATACCAGGGAAGTGTATGTATCCGGGAAATGGCTAAGCCAGTGGCCGCTAACGTCGTCAACATCACTCTCACGCAAATCAAGCTCTTTCAGATTCCTGCACCAAGAATCATACTCCCTGGGTTTCTTAAAATTACATATTCTCAAAAAAAAAATTGTTTCAAAAATATCTATTTTTATTTTTTGCATTTTTAATGCATGTTTTATTAACTAATTGCAAACTTCAAAAAACTTAATTACACTTATTGGATTTTTATTGGTTTAAAATTATGGAAAAAAAATTACAAAAAATAATGCAAATTTAATATGTTTTATTAAAAATGTGAAAAGTCTGAAACATGTAACATTTTGAAATAGAATCATATAACCGATTCAGCCACCTCAAAAAAAAAAATTCTTTGAGTAGCAGGAGGTTTGGGGCCAAAGCCATTAATCTCCCAATCCGGAAACCACAGCATATAATATTCACTTGAACTCTTTTTCAGTTGAGGTCACCTCAAATGTTTACAAACTAGAAATGAAATTAATAACTGAATCTTGCAATGTGGCCATTAAGATACCTGCACGTGGAGGCGATAGCCGCGAGGCCATCGGTGGAGAAGCCATCGCAGGAAGAAAGCACGAGAACTTTGAAATTCTTAAACGACTTAGCTATAAGCTCCAAGCACTCGTCGCTCACCACCATCCTCTTCAGCCTAATCTCCTCCAGCCACGTGTACGCCTTCGACATCGCCTCGATCCACGGATACACGTACCCTCCCCATCCCTCCGGTACCAAATTGAAGTCAGCGAAGTGCGGTTTCCCCTTCAGCTCCACGGATCTCACTTTCGGGAACCTCCTTATCACCGTCGCGGGGCTCACGGCGTAGCAGTTCCCGATGAAGACTCTCCTCCTGCACCAACGCTCGATCTCGTACCACGACTTGCAGACGAGCGAAACGGAGTTCCTATCATTGTCGAGGTGGATAAAGGAGAATACGTGCTCCAGAACTTCTTCCGGAAACGAAAGGCCCGCTCGCTTCTGCATTGCCGCTCGAGATCTTTGATGATCAAAACGAGAGAAGATGCAGAAACAAAACGCTGAATGTTGAG
CDS Sequence
- >BnaC06G0238400ZS
ATGCAAAAAATAAAAATAGATATTTTTGAAACAATTTTTTTTTTGAGAATATGTAATTTTAAGAAACCCAGGGAGTATGATTCTTGGTGCAGGAATCTGAAAGAGCTTGATTTGCGTGAGAGTGATGTTGACGACGTTAGCGGCCACTGGCTTAGCCATTTCCCGGATACATACACTTCCCTGGTATCACTCAACATCTCTTGCTTGGCCTCCGATGTATGTTTCTCTGCTCTGGAGAGGCTGGTGAGTAGGTGTCCCAATCTCAAGTCTCTCAAGCTTAACCGAGCCGTTCCTCTTGAAAAATTGGCTTCTTTGCTTCGAAGAGCACCTCAGCTGGAGGAATTGGGCACCGGTGGCTACACTGCTGATGTGCGTTCAGATTTGTTTAATGATTTATATGTAGCTCTCTCTGGGTGCAAGAAGTTGAAGTGCTTATCTGGGCTTTGGGATGCTGCTCCTGCCTATCTTCCAGCTGTTTATTCTGTTTGCGGTCGGCTTACAACTTTGAACCTGAGTTATGCAACTGTCCAGAGCTATGATCTTGTCAAGCTTATTACCCTTTGTCCTAAATTGCAGCGCCTCTGGGTGCTGGACTATATTGAGGATGCTGGTCTTGAGGTGCTTGCTTCAACCTGCAAGGACCTTAGAGAGTTGAGAGTGTTTCCGTCTGAGCCTTTTGTCATGGAGCCAAACGTCGCATTGACGGAACAGGGGCTTGTCTCCGTCTCCGCGGGCTGTCCAAAGCTCGAGTCTGTTCTCTACTTTTGCCGTCAAATGACCAATGATGCGTTAGTAACCATTGCTAGGAACCGTCCCAACATGACTCGCTTCCGTTTGTGCATCATTGAGCCGAAAGCCCCTGACCATCTAACACTAGAGCCACTTGATGTGGGTTTCGGAGCCATAGTAGAGCACTGCAAAGATCTCCGGCGGCTCTCCTTATCAGGGCTCCTGACCGACAAGGTTTTCGAATACATTGGGAAGTATGCAAAGAAGATGGAAATGCTCTCCGTGGCGTTTGCAGGAGACAGTGACTTAGGAATGCATCATGTTTTGTCAGGGTGCGATAGCCTGAGGAAACTAGAGATAAGGGACTGCCCGTTTGGAGACAAGGCGCTATTGGCCAGTGCTTCGAAGCTGGAGACAATGCGATCTCTTTGGATGTCTTCTTGTTCCGTGAGTTTTGGAGCCTGTAAGTTATTAGGACAGAAGATGCCAAAGCTCAATGTGGAAGTCATCGATGAGCGGGGTCCACCTGACTCGAGACCTGAGAGCTGCCCTGTTGAGAGAGTGTTTATATACCGAACAGTAGCGGGTCCTCGGTTTGACATGCCTGACTTCGTCTGGAACATGGACCAACAGTCATCAATGAGTGTTTAA
Protein Sequence
- >BnaC06G0238400ZS
MQKIKIDIFETIFFLRICNFKKPREYDSWCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASDVCFSALERLVSRCPNLKSLKLNRAVPLEKLASLLRRAPQLEELGTGGYTADVRSDLFNDLYVALSGCKKLKCLSGLWDAAPAYLPAVYSVCGRLTTLNLSYATVQSYDLVKLITLCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSAGCPKLESVLYFCRQMTNDALVTIARNRPNMTRFRLCIIEPKAPDHLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGKYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLASASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGPPDSRPESCPVERVFIYRTVAGPRFDMPDFVWNMDQQSSMSV