Information report for BnaC06G0028600ZS
Gene Details
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Functional Annotation
- Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression.
Homologous
- Actinidia chinensis: CEY00_Acc05725
- Arabidopsis thaliana: AT3G04680
- Brassica oleracea: Bo3g058530
- Brassica rapa: Bra001118
- Glycine max: Glyma.20G242900
- Gossypium hirsutum: Gohir.D04G050600, Gohir.A05G364100
- Juglans regia: Jr10_02550, Jr01_00620
- Manihot esculenta: MANES_17G021000
- Populus trichocarpa: POPTR_017G077200v3
- Rosa chinensis: RchiOBHm_Chr2g0169161
- Vitis vinifera: VIT_14s0066g02630
Sequences
gDNA Sequence
- >BnaC06G0028600ZS
TGTCTTACAATGGTGCGTCGATGAACCCACCCCCTACGATCGTCGCGGTTTCCACGTCTAGCAAACATGTGAAACTCGAGAGAGAAACCGAACTCAGGATCGAAGTCTCCGACACGCCTCTCAAACTCCGTGTCGTGAACGGAACCGCCCAGACGGACGGTACAACCGAAACAGACTACACAGCAGACGAGACACCAATGGTCAGCTACCTTAACGTGCATGCAATCCTAAATGCAAGAAGACGTGTTGCCCAAGCTTCAGAGTCTACACAAGGACCTAGGGTTATTGTAGTAGGTCCCGAGGATTCCGGAAAGAGAACGTTGGCAATGCTTATCAACTGGGCAGCTAAAGAGGCGTGGAAGCCTACGTTCGTTGACTTTGACGTTACCCAAGGCTCGGTTTCAATACCTGGCTCTGTCGCTGCTACACCTATAGAGACGCCTCTTGATCCTGTTGTAGGGTTTCCTCTAGATATGCCCTTAGTGTACTACTACGGTCACACTAAACCAGGTACCAACGTTGAACTCTACAAAGCTACGGTGATGGAGCTTGGAAGAGTGCTGGAGAGACAATTTCTTGGGAACTATGAGTCTCGAGTGTCAGGGAAAGCGGGTACGAGGCGCAGCGGAATGTAACGGTCGTGTTCCCCTGGCCTTGTGTGAACCTGTGAGGAAAATACTTCTACGATAGCAGAATATAGTATAAGCAATAACTAAATGAGACAAGCACTTTTTACGTGGAAAACCTCCTCGATGTGAGAAGGAAAAACCACGGGACCGTAGTCCACTCAACAATCCACTATATAAATGTATGTGAGTACAACCACGTCCTCCCTGTTCAACACCCTGAACAGAACAGAGACTCAAGCTACAAAGAGTTATCTCCAACACAAGAACAACAACAACAAGAGAGCAACACAAAGCTTCAAAACCAGCAGCAACCAAACGACCTCAGTTCACAAGGATTCCGGCAACCAGAGACTAATCCCACCGTACAAATCCAAGATAAACCAGTCAACAACACCTGTACCAAATTTCAGCTCAATCAGAGAAGCTCTCACCGTCGGATTTACCAAACACTCAAGATAGCACTGCTGAAGAACTGTGACGACCAGCTTCACTAAAACCCAGACAACAGAAGATCCAACCGTTGAAATTCAAATCCCTTCGGTGAACCTTTAACCCACTGACTGAAGAAGCTTCCCACCAAATATCAGCCCGATCAGGATCCGTTTGACCCTCCAAATCTGCCTTGACAAACCCAGACGAAATTATGCCTTCTTCCCTCTTTTCTCTCTTTTGTCTTTTCGATTCTTGTAAGTCTCACCATAGGTTAAGAGACTATATATATGTGTTTCACTAACCCTAAGAACCTCCAAGGCCCAATACTAATCTCATGGACTAATACCAATGGCCCAACTTCCAAGTTTAGTTATCACCAACCAAACCCAATGGGTTTCCTCCATCTAGAAGGAACCCAACATCGAGCTGCTGGTATGGTGATCAACACCATGGGTGGTTACGATGAGGTGCTTCTCCACGCGATTGAAACATTCAACGCCTCGGTTGTTCTTGTGTTGGGTCAGGAGAAGCTCTACAGCAAGCTTAAACATGTGTTGAGTAGTAAGAGTAATGTTGATGTCGTGAAGCTTCATAAATCAGGTGGAGTTGTTGCTAAGAACAGTGAGTTCCGTAAAACAGCAAGGAGTTGTCGGATTCAGGAATACTTTGATACGACTCATTCTATCTATTTGGGTCAATTCGCATTGGCCTCTTAATTATCTCGTTTATTAATGTTTAAGGTCTATTAGACCAGGATTATCGGGGGATATTAGAGGATTTTTAATGGTATGGGTTCTACTTTTTTTTGAAAACCGGTCACACAAACCACACAATAAGGATCGATTTTTCTTCAATTCTTGCACTGTTCGCGGACTCCACTGACACGTGACGGCCTGCGATTGATGCGCCTTTTAATTTTTTTTTTTTTAATCAGAAAAAAAAAAAACAAAAATACTTACCTATGAAATTGTGCATGGTTAACTAACCCTCGGTTTTTAGAGTGCGGTTCTTATTGGAAGTTAAAAAATAGTTTTTTAACTTCCGCTAAAAACCCCACTCTAAGAACTCCGGGTTAATCATAGTCTTAGACCATCATTATCCCAGAAACCCCATTTGGGGTTTCTTAATTTTTTTTTTTTTTTACTTTTTCAAATTTAGAAAAAAAAATTAAAAACGAACCAATCGCGAGCCGTCACGTGTTAGTGGAGCCCGCGAACAGTGTAAAAAACCCTTAAGGACCGACTACTATTTGGTAGTTTTGATAACCGGTTTCTTAAAAAAAGTGGGTCCTACGCGGAACTCACACGGTAAGAATCTCTGTAGTATCATTGGATAAAGATGCTCTTAGTTGCTTTATATTATTAGGAACTCTCTCTACCGTATGTTTATTGAATTACGATCATAATCAAACGGGTTAATCCCTTATCTTCTTCCTCTCTACCTTCTCTTTTACCTCTGCTCTTCCTCTGCTCTTCCCCCCCTTTCTGTTACTTATCTTAAGGATAGATCCTGGATCTATCATACTTCTACGGTCTGTCCAAAGAACTATCTCCGTATGCTAATACCTCTAGCATCAGCGATGTGAAAGTGTTCCGCATTGGTGGTAGACCACAAGCTCCAAGATCAGCTCTTCCAATGGGGTCTGACCCGGTTTCTGATCCGTTGAAGGTAACGCATGTGAATATCGATGACCGGGATGTGCTGCATTCTGTTCTGGCTGTCTCGTATGCACAAGAACCAGACCGGATCGTGTCAAGTAATGTTTCCGGGTTTGTGTATGTAACGGAGGTTGATGTGCAAAGGAAGACGATTACGTATTTAGCACCGTCGCAAGGGACATTACCCAGCAAGTTCTTGGTGGCTGGATCTTTGTCTTGGAAGAAAAGATAA
CDS Sequence
- >BnaC06G0028600ZS
ATGTCTTACAATGGTGCGTCGATGAACCCACCCCCTACGATCGTCGCGGTTTCCACGTCTAGCAAACATGTGAAACTCGAGAGAGAAACCGAACTCAGGATCGAAGTCTCCGACACGCCTCTCAAACTCCGTGTCGTGAACGGAACCGCCCAGACGGACGGTACAACCGAAACAGACTACACAGCAGACGAGACACCAATGGTCAGCTACCTTAACGTGCATGCAATCCTAAATGCAAGAAGACGTGTTGCCCAAGCTTCAGAGTCTACACAAGGACCTAGGGTTATTGTAGTAGGTCCCGAGGATTCCGGAAAGAGAACGTTGGCAATGCTTATCAACTGGGCAGCTAAAGAGGCGTGGAAGCCTACGTTCGTTGACTTTGACGTTACCCAAGGCTCGGTTTCAATACCTGGCTCTGTCGCTGCTACACCTATAGAGACGCCTCTTGATCCTGTTGTAGGGTTTCCTCTAGATATGCCCTTAGTGTACTACTACGGTCACACTAAACCAGCTGCTGGTATGGTGATCAACACCATGGGTGGTTACGATGAGGTGCTTCTCCACGCGATTGAAACATTCAACGCCTCGGTTGTTCTTGTGTTGGGTCAGGAGAAGCTCTACAGCAAGCTTAAACATGTGTTGAGTAGTAAGAGTAATGTTGATGTCGTGAAGCTTCATAAATCAGGTGGAGTTGTTGCTAAGAACAGTGAGTTCCGTAAAACAGCAAGGAGATTTTTAATGATCCTGGATCTATCATACTTCTACGGTCTGTCCAAAGAACTATCTCCGTATGCTAATACCTCTAGCATCAGCGATGTGAAAGTGTTCCGCATTGGTGGTAGACCACAAGCTCCAAGATCAGCTCTTCCAATGGGGTCTGACCCGGTTTCTGATCCGTTGAAGGTAACGCATGTGAATATCGATGACCGGGATGTGCTGCATTCTGTTCTGGCTGTCTCGTATGCACAAGAACCAGACCGGATCGTGTCAAGTAATGTTTCCGGGTTTGTGTATGTAACGGAGGTTGATGTGCAAAGGAAGACGATTACGTATTTAGCACCGTCGCAAGGGACATTACCCAGCAAGTTCTTGGTGGCTGGATCTTTGTCTTGGAAGAAAAGATAA
Protein Sequence
- >BnaC06G0028600ZS
MSYNGASMNPPPTIVAVSTSSKHVKLERETELRIEVSDTPLKLRVVNGTAQTDGTTETDYTADETPMVSYLNVHAILNARRRVAQASESTQGPRVIVVGPEDSGKRTLAMLINWAAKEAWKPTFVDFDVTQGSVSIPGSVAATPIETPLDPVVGFPLDMPLVYYYGHTKPAAGMVINTMGGYDEVLLHAIETFNASVVLVLGQEKLYSKLKHVLSSKSNVDVVKLHKSGGVVAKNSEFRKTARRFLMILDLSYFYGLSKELSPYANTSSISDVKVFRIGGRPQAPRSALPMGSDPVSDPLKVTHVNIDDRDVLHSVLAVSYAQEPDRIVSSNVSGFVYVTEVDVQRKTITYLAPSQGTLPSKFLVAGSLSWKKR