Information report for BnaC05G0514700ZS
Gene Details
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Functional Annotation
- This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.
Homologous
- Brassica oleracea: XP_013586534.1, XP_013586533.1, Bo5g141290, XP_013622990.1, XP_013622989.1, Bo3g061400, XP_013620212.1, XP_013620144.1, XP_013620050.1, XP_013619988.1, Bo1g147240
- Brassica rapa: XP_009147048.1, XP_009147047.1, Bra029666, XP_009134989.1, Bra001264
- Raphanus raphanistrum: RrC508_p5
Gene Resources
- Pfam: PF06203 PF00643
- UniProt: A0A078GSA0
- EMBL: HG994369 , LK032213
- AlphaFoldDB: A0A078GSA0
- KEGG: bna:106401857
- OMA: WYPQASS
- InterPro: IPR000315 , IPR010402 , IPR049808
- PANTHER: PTHR31717 , PTHR31717:SF131
- PROSITE: PS50119 , PS51017
- OrthoDB: A0A078GSA0
- SMR: A0A078GSA0
- CDD: cd19821
- STRING: 3708.A0A078GSA0
Sequences
gDNA Sequence
- >BnaC05G0514700ZS
GTCTGAAAAAGATTCTGGATACTGTCTTTAATTTACAAGAATGCACAGTGCAAAGCACTTATGAGAGCATACATACATTATATACACATGGAAAGAAAGTCATATACCAACTACCAAGACAAGAGCAAAATTCATGGAACCTTGATCTGTGTAAAAGCCCTGAAGCAGCAGAGATCCAATTGGATAAATATTTTTTGTCAGAGAACGATCTCTCTGAACACTAATGAAGCTTCTTCAAGGCCAAAAAAACAGATTGAATCCCAAGAACGAATCATTTGCTTTACAATACTCATCAGTTTAATGTCTTCTCAAACCCCAGAGAGTAGTCTTGTTTTTTCACAGTTTCTGACTTTTGAGAACTCTCTCCATAAGTCAAAAACCTTTCTTGTTTGATTTTCCGCCATGTGCATCTACTTTGTTTACCTCCTTCAGTAGCTTCTGGTTGGGGTGAGTGGGTCATAGTCATAAGCTTCACCAGCTTTGACAAATCTCCCCTTCACACGCCGTCTCACATCAGCTCTTGCTTTGCGAGAAGCATACCTCACTGTCTTATCAAACCTGTATCAAACAAAAAGCCAAAGAATGTCTCGTTTAGAAAACACTTTACACTTACTTCAGTGATGCAATGCATTGGATTCGCAATGGCACTTACTTGCGAGCCTTCTTTTTCTCCTTGTAACGCATAACAGCGTTATTACGAGTCACTGAATGTGAGGAAGCATTGTTATCCTGTGATGATGCTTGAGGATACCATGGTGGCTCCCCAGAGAGCTGCATGGAAGATGATGCACCACATTCTTGAAAATCTCCAGCGCTGCAATCTCCGGTGACTCCAGAGAAAGATATGTTGGAATGTGCTGGCTTCGATGTGAAGCAAATGATTGGCTCTGTTTTCGAACTCATGAAAGAATCATCATTGCTCTCAGCTGGCTGCACCAGATTCCCTCCCTGGATTAAAAAAAGAACAAGATCATCACTAGAATCAAAGGAACATGCATTATTGCTTGTGAACCTCAAAAAAAAAAAAAAGAAGATGACAAACAAAACATACATCAGGAGCTGCTGCTTGATGATGTTTCTGGAAAAGACTATCAATTCCACCTTGTCCAAAGAGCTCTCCAGAGGTGTTAAAGGCTGTCCCAAAGAGCTCTTCATAGTTCTCAAGAGCCAAGTCAACTTCATCCATACCCAAGTTCCCATAAAAGTCATCTTCACATACTCTAACATCCTTCAAACACCATAAACAAACAATAACTTGAATTTAGTTAATAAATCATAAACCATGAATGCCATACTATCCATAAAATACACTCCCTCCGTTTCATAGAGATGCATATTTTAGAAAGAAATAAATTGTTTTAAAAAACATTTTTTTTTTGTATTTTCAATGCACTTTTTATCAGCTAATAATACAGACTAATTAACTGTAAACTTCAAGAAAACTAACTGCATTTACTGAATTCTTATTGGTTTAAAATTGCGGGAAATAGATAATTACAAAAATTATGCATTTAATACTGAAATTTAATATGTTTTATTAATATGTATGAAAAAACTATCATTTTGAATCAAAGAGAGTATATATACCTTGGGAAATGATGAAGTTGCAGGTGCAGCAGAACTGGTTTCAGGCCTTGAGGAGGAGCCGGCGACCACATCTTTCTTATCCTCATTACAGTTTTGGTTGCCCTGACCATCATCATCTATATTCATCATACCCATTTCTTGCTCACAGCCTGATTGTCCAGCTAACTCCAAACAGAAAGACCAGATAGAGGCGAGCTCCGAGCTCGAAGGGCAACCAGAATAGCAGCTTATGGTTTGCCTCTTGTGATTATTTGAGGAAGAAGAAGAAGAATTGTTGTTGTTGTTGTTGTGGCCAGACCAATCACAGTTTTGACAGAGGGAAACCCTTTCTTCAACACACCTGACCGTAGCAGGCTGAGCATTGCATCTCTCGCAGACAAGCGTTCTAGAATGTCGTTTGGACAATGCGTTAGCGGAGTGGACGCTCCTGTCGCAGGAGAGGCAGAGACAGGCTGCGTCTGAACGACAGTAAACCATTGATCTTTGTTCACCACAGAAGTCACACATGTAACCCATCTTCTTTCAGTGCTGTAATTAAAAAAAAAATCATATATACATAAACCATGAATTAAATAAAAAAGACAAGAGACTTGGTCTAAAAAAGCAAGACATAGATGGAATCTCTTTTAAAAGTTTTATGAATTTTGGTCTGAGCTTTCATATGAACAGTCAGAGAACTAAAAGAAATTAATCAAAATCGAAATAAATAAAAACAAAGCTTCAGACTACAGATCAGTACATCTAATGTTTTTTTTTAATTTGACTTGTAGTTCAAGATGAATCCAAAATTCAATAGTTCTTAGAAAAAAAATCAAGCTTTGTTAACTATCACAATCATCATGCTCATCCTCATCCAAACAAAGCTTAAGAAACCAATTATCAAAAAGAAAACAAGAAAATCTCTTTAAATCGAAGATCCAACAACACGAGACATATATAGAGACAGATTCATTAAGACCCTTCATAGTGAAACAGTGGATAAAAAGCTAGTAACAATTATTATTACAGACGGATAATCCGAGAAATATAAGAACACTCAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGGAGAGGAAAACAACTTACAGTGTTAAAAGATCTTATTATGAAGTTGAATCGAGAAAAAAATCTG
CDS Sequence
- >BnaC05G0514700ZS
ATGGGTTACATGTGTGACTTCTGTGGTGAACAAAGATCAATGGTTTACTGTCGTTCAGACGCAGCCTGTCTCTGCCTCTCCTGCGACAGGAGCGTCCACTCCGCTAACGCATTGTCCAAACGACATTCTAGAACGCTTGTCTGCGAGAGATGCAATGCTCAGCCTGCTACGGTCAGGTGTGTTGAAGAAAGGGTTTCCCTCTGTCAAAACTGTGATTGGTCTGGCCACAACAACAACAACAACAATTCTTCTTCTTCTTCCTCAAATAATCACAAGAGGCAAACCATAAGCTGCTATTCTGGTTGCCCTTCGAGCTCGGAGCTCGCCTCTATCTGGTCTTTCTGTTTGGAGTTAGCTGGACAATCAGGCTGTGAGCAAGAAATGGGTATGATGAATATAGATGATGATGGTCAGGGCAACCAAAACTGTAATGAGGATAAGAAAGATGTGGTCGCCGGCTCCTCCTCAAGGCCTGAAACCAGTTCTGCTGCACCTGCAACTTCATCATTTCCCAAGGATGTTAGAGTATGTGAAGATGACTTTTATGGGAACTTGGGTATGGATGAAGTTGACTTGGCTCTTGAGAACTATGAAGAGCTCTTTGGGACAGCCTTTAACACCTCTGGAGAGCTCTTTGGACAAGGTGGAATTGATAGTCTTTTCCAGAAACATCATCAAGCAGCAGCTCCTGATGGAGGGAATCTGGTGCAGCCAGCTGAGAGCAATGATGATTCTTTCATGAGTTCGAAAACAGAGCCAATCATTTGCTTCACATCGAAGCCAGCACATTCCAACATATCTTTCTCTGGAGTCACCGGAGATTGCAGCGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCATGCAGCTCTCTGGGGAGCCACCATGGTATCCTCAAGCATCATCACAGGATAACAATGCTTCCTCACATTCAGTGACTCGTAATAACGCTGTTATGCGTTACAAGGAGAAAAAGAAGGCTCGCAAGTTTGATAAGACAGTGAGGTATGCTTCTCGCAAAGCAAGAGCTGATGTGAGACGGCGTGTGAAGGGGAGATTTGTCAAAGCTGGTGAAGCTTATGACTATGACCCACTCACCCCAACCAGAAGCTACTGA
Protein Sequence
- >BnaC05G0514700ZS
MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNNNNNSSSSSSNNHKRQTISCYSGCPSSSELASIWSFCLELAGQSGCEQEMGMMNIDDDGQGNQNCNEDKKDVVAGSSSRPETSSAAPATSSFPKDVRVCEDDFYGNLGMDEVDLALENYEELFGTAFNTSGELFGQGGIDSLFQKHHQAAAPDGGNLVQPAESNDDSFMSSKTEPIICFTSKPAHSNISFSGVTGDCSAGDFQECGASSSMQLSGEPPWYPQASSQDNNASSHSVTRNNAVMRYKEKKKARKFDKTVRYASRKARADVRRRVKGRFVKAGEAYDYDPLTPTRSY