Information report for BnaC05G0378900ZS
Gene Details
|
|
Functional Annotation
- JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. The jumonji-C is frequently found in proteins with histone demethylase activity. jmjd5 mutant plants have a short-period circadian phenotype.
Homologous
- Actinidia chinensis: CEY00_Acc15096
- Arabidopsis thaliana: AT3G20810
- Brassica oleracea: Bo5g106210
- Brassica rapa: Bra035742
- Citrullus lanatus: Cla97C03G063630
- Juglans regia: Jr14_20150
- Manihot esculenta: MANES_06G168600
- Medicago truncatula: Medtr4g066020
- Nicotiana attenuata: A4A49_40783
- Populus trichocarpa: POPTR_001G016200v3
- Prunus persica: PRUPE_6G015700
- Rosa chinensis: RchiOBHm_Chr5g0078171
- Solanum tuberosum: PGSC0003DMG400021346
- Vitis vinifera: VIT_06s0004g01630
Gene Resources
- Pfam: PF13621
Sequences
gDNA Sequence
- >BnaC05G0378900ZS
TAAAGACCTGACATAGTGCCACCATTTGGGAGGATGTACAGCATTTCTCCTTCCTCTAGGATACAATCCATAAACTCTAGCTCCACCGCCTTTGGAAACTCGTTCTTGTCGATGTTGTCAAGATCAACCTTCAACCAAAGTTTGAAACCACCCCGTTTGGACACAAGGATCAAGTCGACTCAGCTTCCGTTTAAACACAGTATCAGATCTGAATATAGGATTAGAAAACTTACCTGGCTAGAGTTGCAAAGCATTGTCTCAGGATAAGGGTAAAGTTCGTCTTGCAACGAGGATGGGTAAAGCCTTACATACTTCTTGCCAACAACCTGAAGAACAGATAACACAAAGAAACTTCAATAGTAGGAGGAAAGAACCTAAACAAAGAAACTTTCTGTATACTATAGAACATTTATTGCAGGCGAAACGATTTGTTTGGTTAGTCAAACTAAGAGTTTAGTTTGTTCAGACATCAGGCTTCAATCCAGGGAGATGATCAGGCTTTATTATGCAAGAACATCAAAGAAGAAGAAGCTCGTTAAACACTTACAGAACATACACATTGGACAGGTTGATAGCGAGAACAGACAAGAAGCCATGCTCATTTAAGGAAAAAGATCTGAAGCCATAAATACCTGAGCAAGTATATTATGATGTGGATCATGGTGTAAAGGAGTAACTGTCCCAGCCGGACCAAACCAAGCATTAAGAGATTGGAGATCCCCTCCACCGACAAAACAGTAATCAGGAATACATATATCATCTCTCAGTTCATTTATCTGCCCACCCAGTCATGTTAAACCAATGAGCCATAAGTTCAGTAATCAGTATATGATGATGCATACATACATACCTGATCAAACAACGGATGCTGAGCAGATAAGTAGGTTCCACGGAGGTGGATCTATTGGTCCTCATCCGTTCAAGGAACTTGGAAAAAGTCACAAGCTCTTGTTTCCAATCTGAACACAAATAGTTTTTCCCCACCTGTATAGCATTTTAAACTTCTACCAGCTTTCAGCTAATTCTGATCTAATCACAACTCTACATCAACACTCACAAGCTAACTAAAAGTACGTTAATGATGAGTAGAGTAAGTCACCTCGACGGGAACGGTACGGTTACCAGCAACAGAAGTGAGATAGTCCAAGTGGTTCCACTTGGTCCTAGCTGGCCAATGAGCCATACAATTGGTTATAACAACAGGTGTACCTGTCTGAAAATAATCACGAAGAAACCCCTCCATAGATAAATCACACCTCTTCTCTACCCTTCCACTAGTCAATGACCTCATAGGTAGAATCTTTAGCACCTGCAAGTAAAGTTTTCAACAAACCCCAACACTCTCAGTTTCCGACAGAAGAGACCAAACTAAACTAATCCTACCCAAATGTTAACAAGATCTGAGCTTTTTACCTCACTGACATCGACGGGAACTTCAGGGACCAACTTCTCACCCTTGAAATCTCCGAGGCTCTTAGCCATCTTACGAGCTTCAGAGGAGACCAAGAGCACAGAGTCGTGGAGGTCCTTGCGGAGAAGCGTCCCTCCCATGATGAGACCCATATCGAGCGCGCCGAGAGCTTCCCCAAACTCGCCGGCGGCGAAATGGAACTTGGCGACGTGGAGACAAGCCATCGAGTAAGCGTCGCGCCAGACGGGGAGAACAGAGTGCCAGGGACCGGAGTGAAGCTGCTCCCAGGCCATATCACGCGCCGCCTCCGCCGCGCTTTGGTCGCCGGCGACTGCTAGCGCCGCCATGCGAGCATAGGCGTAACCGCCTTGAGCGGAGATCGACTGCAGCAGGGATTGCGACTCCGCGTCGAGGGTTGGAGTCGGGAGATGGAGGCTGTGGTTTCCGGAGGAAGCGGCGGTTGGAGCTCCTGACAT
CDS Sequence
- >BnaC05G0378900ZS
ATGTCAGGAGCTCCAACCGCCGCTTCCTCCGGAAACCACAGCCTCCATCTCCCGACTCCAACCCTCGACGCGGAGTCGCAATCCCTGCTGCAGTCGATCTCCGCTCAAGGCGGTTACGCCTATGCTCGCATGGCGGCGCTAGCAGTCGCCGGCGACCAAAGCGCGGCGGAGGCGGCGCGTGATATGGCCTGGGAGCAGCTTCACTCCGGTCCCTGGCACTCTGTTCTCCCCGTCTGGCGCGACGCTTACTCGATGGCTTGTCTCCACGTCGCCAAGTTCCATTTCGCCGCCGGCGAGTTTGGGGAAGCTCTCGGCGCGCTCGATATGGGTCTCATCATGGGAGGGACGCTTCTCCGCAAGGACCTCCACGACTCTGTGCTCTTGGTCTCCTCTGAAGCTCGTAAGATGGCTAAGAGCCTCGGAGATTTCAAGGGTGAGAAGTTGGTCCCTGAAGTTCCCGTCGATGTCAGTGAGGTGCTAAAGATTCTACCTATGAGGTCATTGACTAGTGGAAGGGTAGAGAAGAGGTGTGATTTATCTATGGAGGGGTTTCTTCGTGATTATTTTCAGACAGGTACACCTGTTGTTATAACCAATTGTATGGCTCATTGGCCAGCTAGGACCAAGTGGAACCACTTGGACTATCTCACTTCTGTTGCTGGTAACCGTACCGTTCCCGTCGAGATAAATGAACTGAGAGATGATATATGTATTCCTGATTACTGTTTTGTCGGTGGAGGGGATCTCCAATCTCTTAATGCTTGGTTTGGTCCGGCTGGGACAGTTACTCCTTTACACCATGATCCACATCATAATATACTTGCTCAGGTTGTTGGCAAGAAGTATGTAAGGCTTTACCCATCCTCGTTGCAAGACGAACTTTACCCTTATCCTGAGACAATGCTTTGCAACTCTAGCCAGGTTGATCTTGACAACATCGACAAGAACGAGTTTCCAAAGGCGGTGGAGCTAGAGTTTATGGATTGTATCCTAGAGGAAGGAGAAATGCTGTACATCCTCCCAAATGGTGGCACTATGTCAGGTCTTTAA
Protein Sequence
- >BnaC05G0378900ZS
MSGAPTAASSGNHSLHLPTPTLDAESQSLLQSISAQGGYAYARMAALAVAGDQSAAEAARDMAWEQLHSGPWHSVLPVWRDAYSMACLHVAKFHFAAGEFGEALGALDMGLIMGGTLLRKDLHDSVLLVSSEARKMAKSLGDFKGEKLVPEVPVDVSEVLKILPMRSLTSGRVEKRCDLSMEGFLRDYFQTGTPVVITNCMAHWPARTKWNHLDYLTSVAGNRTVPVEINELRDDICIPDYCFVGGGDLQSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYPSSLQDELYPYPETMLCNSSQVDLDNIDKNEFPKAVELEFMDCILEEGEMLYILPNGGTMSGL