Information report for BnaC04G0060400ZS
Gene Details
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Functional Annotation
- Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.;Suppressor of Overexpression of Constans 1;Encodes a MADS‐box protein
Homologous
- Arabidopsis thaliana: AT2G45660.1
- Brassica oleracea: XP_013631375.1, XP_013631374.1, Bo4g024850, XP_013630325.1, XP_013630326.1
- Brassica rapa: XP_009143158.1, Bra004928, XP_009133734.1, XP_009133737.1, XP_009133736.1, XP_009133735.1, Bra000393
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A078JU96
- RefSeq: XP_013686224.1
- EMBL: HG994368 , LK038596
- AlphaFoldDB: A0A078JU96
- OMA: KAYTKDH
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: A0A078JU96
- SMR: A0A078JU96
- CDD: cd00265
- STRING: 3708.A0A078JU96
Sequences
gDNA Sequence
- >BnaC04G0060400ZS
CACTTTCTTGAAGAACAAGGTAACCCAATGAACAACTCTGTCTCTACTTCAGAACTTGGGCTACTCTCTTCGTCACCTCTTCCACTTTCTTGGTTCTTATTCGACCGGACTTCGATTTCATGAGATCCCCACTATAATAAAAAATAATTATTAATATATAGACACAAGACTAATAGATGCAAATAAGATAGAACAAACACATAGACGATCAAGGTCATGAGTCACGACGATCGAATAACCCTAAAAAAAAGAGCCTAACTTTTAACTATCATAAGAGAATAAAAGAAACGGTGTGCAAGTGTAATCGTACCTTGAGAACCATATGGGATATTCGTTTTAAGAAGAAAATGTGCAAGTGCAACCCTAACTAGAGAACCATAGGATATATTCGTTTATAGAATATATTGTACCTTTTCAGCGAGCTTCTTGTTTTCTGCAGCTAGAGCTTTCTCCTGCAAAGTTTATTCCAATAGTAAAAAGCAAGCACAAGAAGATTATCAAGTTGGAGTATTCCACCACTTGCGTCTCATTACCTTTTGCTTGAGCTGCTCAATTTGTTCCTTAAACACTTGAGTCTAAAAGAAACGAGTAACTAAGTTAGAATTATGAGTGCTTCAATAAAAATCATAATGTGGGGACGATATATATACCTTTCTAGCTCGGATACATTTGACACTTTTCTCAAGTTGTTGCTCAATTTGCTGCAGCTCCTCTATCGAACATGATCCTATGCCTTCTCCCAAGAGTTTACTAATTATAATAAGAAAAGACTTAATATGATCAAACTCCTACTATATGATGTATATACAATAATTCAAGTCTATGATTTGTGTTGTATTGGATCACCAACCGTTTGGAAGCTTCGAGTTGTTCAATTTTCTTCATCATGTTTGCTGCCTCATGTTTCAAATGCTGTAGGTTAAATCACAAAATGTTATTGCATGTGATTATCTTTAATATGTAGCTTGAGAAAAGTGACACTGAGTACTAATATGTGACGTTGAGATTATATACAGACAGTGTATGATACTTTTTCTTATGCCAATTTATTTTTGTATTAAAAGTTAGCACACAATATCATAATTAACCTGCAAATTTTCTTCAGAAACAGGTTTGGTGCTGACACGATCCTTGGTATGCCTCAGATAACGATCTATGGTATCTTGCATACTGTTAAAACATTGAAACAATTTCACAGATTGAATAAGCACAATGCAAGAAACCAAATCATTTTTTTCTTGAACTCAAAAGTGACAAGTTAAGAACGTAAAAACTTTCTTAGGTGAAGATATCACAAGTCTTAAGGACATTACTTAGAAAGTCGTGTACTATATGGTTTTTGCCCCCAAATTTTTGGAAAAACCAAAAACATGTGAGTCTCTTTACTTTAAATTAAGTAGGTTGAGAGAAAGAAGTACAACAAATCGTGTGAAACATCTGATCAAAAGCTGGCCTTTTCTATTTACAGATGTAATGATTCATCAAAAGTACATTTGGTTTCCCTTCTACCCAACAGTATAAGATAAGTTCTTTCTAATTCTCAAAACAATCTACATTTAGATTCTGGTTTGAGTTTCACAGCAAAAAATTAGGTAGAGAAACAGTAGGAACAAAACATGCAATTTAACTGAACGATATTAGGAATGAGCATGAAATAAAACGTGCCTGATTTATCTTTCAGGACTGATATAAAAAAAAGTTCCCAATTATCAGTTAGAGCAATCTATAATTTTTTTAAGCAATGACAAGGCAGATTGGTTCAACCAGATTGTGTATCATGTCAAAACAAAAGAATGCTAATTGCAACATAAATATCATTTTTGAACGAACCAAGAAAGAGTTTAATACAAAACTCAAGGAGTTGTCCAGTGTGTGATTATGATCTCTAAAACAATCCAAGATGATCAATTGTACATACATACATATAACAAGTGCAAAGTACTTGCCAGAGAATTCTTTTGTGTTTTAACGTTTATCATAACTCATAAACTAAATATGAGAAAGAGACATCTAATAGGATTAAACAAGATGATGTAGTAGTTAACAAGAAATAAATAAGATGATGTACTTGGTTTTACTTTAATAATAGACACAATTGTAGAAACCAAGAAACTCACTTAACAGTTAACACTCTCTCTAAGCAAACGTCAAAGAGATATGATTCAGTAAACCGCCAACAGATCCATATATAAACCAAGGTATATAAACAAAAAAATTTATCTCTTTTATCTGTAGACGATTTATATATATATAGTATAAAAAGGAGAACGTACTTGGAGCTGGCGAATTCATAAAGTTTTGCCTTAGGAGAGAAGATGATCAGAGAAACTTCAGCATCACAAAGCACTGAGAGCTCAAAGGCTTTTTTCAACAAACCATTCCTTCGCTTAGAGAAAGTCACTTGTCTGCTTGTTGCATTCTCTATTCGCTTCATCTGAGTTTTCCCCCTCACCAT
CDS Sequence
- >BnaC04G0060400ZS
ATGGTGAGGGGGAAAACTCAGATGAAGCGAATAGAGAATGCAACAAGCAGACAAGTGACTTTCTCTAAGCGAAGGAATGGTTTGTTGAAAAAAGCCTTTGAGCTCTCAGTGCTTTGTGATGCTGAAGTTTCTCTGATCATCTTCTCTCCTAAGGCAAAACTTTATGAATTCGCCAGCTCCAATATGCAAGATACCATAGATCGTTATCTGAGGCATACCAAGGATCGTGTCAGCACCAAACCTGTTTCTGAAGAAAATTTGCAGCATTTGAAACATGAGGCAGCAAACATGATGAAGAAAATTGAACAACTCGAAGCTTCCAAACGTAAACTCTTGGGAGAAGGCATAGGATCATGTTCGATAGAGGAGCTGCAGCAAATTGAGCAACAACTTGAGAAAAGTGTCAAATGTATCCGAGCTAGAAAGACTCAAGTGTTTAAGGAACAAATTGAGCAGCTCAAGCAAAAGGAGAAAGCTCTAGCTGCAGAAAACAAGAAGCTCGCTGAAAAGTGGGGATCTCATGAAATCGAAGTCCGGTCGAATAAGAACCAAGAAAGTGGAAGAGGTGACGAAGAGAGTAGCCCAAGTTCTGAAGTAGAGACAGAGTTGTTCATTGGGTTACCTTGTTCTTCAAGAAAGTGA
Protein Sequence
- >BnaC04G0060400ZS
MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKAKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENLQHLKHEAANMMKKIEQLEASKRKLLGEGIGSCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENKKLAEKWGSHEIEVRSNKNQESGRGDEESSPSSEVETELFIGLPCSSRK