Information report for BnaC04G0055200ZS
Gene Details
|
|
Functional Annotation
- The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.
Homologous
- Arabidopsis thaliana: AT2G44950
- Brassica oleracea: Bo4g024230, Bo4g195290
- Brassica rapa: Bra004879, Bra040332
- Gossypium hirsutum: Gohir.A11G077100, Gohir.D08G040700
- Manihot esculenta: MANES_01G271200, MANES_05G051900
- Populus trichocarpa: POPTR_014G055800v3, POPTR_002G141300v3
- Prunus avium: Pav_sc0002441.1_g040.1.mk
- Prunus persica: PRUPE_2G122900
- Rosa chinensis: RchiOBHm_Chr1g0346311
- Vitis vinifera: VIT_15s0021g02140
Gene Resources
- Pfam: PF00097 PF12678 PF12718 PF12861 PF13639 PF13920 PF13923 PF14447 PF14634 PF14835 PF17121
- UniProt: A0A3P6BHJ8
- EMBL: LR031873
- AlphaFoldDB: A0A3P6BHJ8
- InterPro: IPR001841 , IPR013083 , IPR013956 , IPR017907
- PANTHER: PTHR23163 , PTHR23163:SF0
- SUPFAM: SSF57850
- PROSITE: PS00518 , PS50089
- Gene3D: 3.30.40.10
- SMR: A0A3P6BHJ8
- CDD: cd16499
Sequences
gDNA Sequence
- >BnaC04G0055200ZS
GAACAAATGTGCTCCCTATATAAAATGAGCTTAAGTGTAAATATGGGTTTATAAGCTATGATTTATCTAATTTTCCCTCACTTGTTTTCAAAGAGTAGTTTGAGAATACAAAAACAAAAACACAAAAAGTTTGTTCCATGTGCATCATCATCATCATATGTAGATAGGCTTGATATCGTTGGGTCCAAAACTTGCTGAGCAAGTTGGACACTTCCTCTGTCGAGTTCCTATGATCTTTTGCACACATGGGTTGCAAAACAAATGGAAGCACTTCGTGATCACCACCTTTAGTTTATTTATTAACAAGACCAAAACCAAATCAGCACGCATACAGTTCATTAAAGATTTGAGCAGAGTGAGGAGTCTTTCTTTACCTCTTTTGAGCGGTCGTTGCAGGCCTTACACTTCAAGATCTCTTTGAATTCACTGAGTTCTTGACGGAGTTTCTGAGTGGCTGAGGATCCTTCTATCAGAGACCTAAGACGAGAAACTTTCTTCTTGGCTGTTTCCATGTCCTCTTCTATCCTTCTCCTATTGAACCTGATATATACATAAATGCACTTCATCAACCAACACTTGCTTGTGTGTCTGTGTGTGTTGACTAACTTACCTTTCGGTTTCCAGCTCAAGTTCCAATGCTCCATAGTCCACCCGACTTTTCTCAACTCTAGAATGCGACTCCTCCAGCTTTGACCTAGCTTGTTCCAAGCCATTCACAACATCTGCACGCTTCTTTTGCAGATTCTCAAGAGTGATTGACTTCTGATATTTATCTTCCGCTAGTCTCTGATACTGATCTGTGCAGAGCCTCATCTGCAATAAAAAAAAAAGACATTCGAGTCAAAAAGTCAAGATAATCAAGGAGGTTCTACAATTTGAGTACATTTACCTGATCTTCAATTCTTAAGGATCTCTTGGAGAGGAAACTTGCTGATGCACTGGCTTGCTGAATATCTTTATCCATGATGTATTTACCTATTAGCAGGGCATCTTGCATCTGCCTTGAAGTTATGCCTTCCAAGAAAAGCTGAAACAGTAACAGACCATGCCCATTAACACAAATCATCAAATCTCCAGCTAAGTGTGAAAAAGAAGAAGAAGAGTTTTGGATACCTTGATGTTATAGTCATCCCTCTCAGTGACTTGAAGCAAAAGCTGTTGGTTTTGTGGTACAATGTCCTCGTAGGCACTTCCAATTGTCTAAAAGAAGATAGTTAACTGTAAATCGATACCCCAACCATCAAGTTTTTTAAAAACACATGCTAGAAACAAAAGAAACAAGAAGTTTCATAAGCAAACCTCTATTTCAGAAAGATATGTTCCATGTTCCTCATTTTTGGATTTCAAGACATCAGAATGCTTTGCCACATCCCTGAGACAAAAAAAAAAGACACATACTTGTAAGAGAAATGCCAATACGAAGCATACGAAGAGTAATTGATTATTTTCACCGTTTGCAATCATCCATTCTCTGTCTTAAATCAGCAATCTCAGCTTCCGCAGCAGCCAACATTTGTTGTGATACTGCCTCAGCTTCGTTTGCTGCCTTAACGCGCAGCTCGAGATTCTGCTCATCAAGGGAGGTCTTCAAACTTTCAACATGAGCCCAGGCCCTGTACTCTTGTTCCTTGGCTTCAGCTATGTCCCTGCCATATCACAATGCACCAAGCGCATTTTAATAACAAGTGTTCAGCCAAGAAAGGAAGATGAACAAATCCTAACCACATACAAAAGAGATTCATCTGATTAAACCGTAAAAACAGAGCTCATCTACATAGAAGGGGAGGCTAAGGAAACTAGTCTCTAAGCATTTCAAATCTTGGATAACGATCATCTTTGCTACATATGATTTTGCTTACCTCGGATCAGTGGACTCGCGTTTAAACATGTCCAGAAACAACTGTAACTCCTCGTGACTGTTCTTCAGATCACGAACCTGCATGACAGATTCAACTTAGTTTTAAAAATGAAGAGCATAACAACTACATCTTCGCCAACCAAAAATTATTATGACAGATCTCAAATAGTGAATCCGACTTCTCACAGTACTTCTTCCAAGAAATATATATTTTTCAAACAAGGTTTGACATAATGCAAGTAACGTTAACATATAAGTGATGGGTAGTACACTGAAAAGGAAAATGTACTGCATCATACCGTAGCATTCAGGTCACGTAACTGAGAAGCATAACCAGCTGATCTCAGATGCAATGCTTCACACTCTTTTCCCTGTTCACCAATTCGCCTTATTAAGTAAGAAAAAAAAAACACAAACTATTAACAGCATAACATTGTTCAAGATCATTGCTCACCTTCCTACATAGAACCCCGGAGAGGGACTGGGCATCAGCCCGCAGAGAATGAATACCTCCAGCAGTCTCTTTGTAATTGCTTAGCTGACTTCGCATGGAACTCATTTCCCCTGGGAACGAAGACACTAACGCCTTCGTATCTGCAAAGAGTTCTTTTCTACCTCGCTCTTTCGAAATGTTTCCCAATCTAGTCTTGATTCTCGCTTTCTCATCATGCTGTTTCTGTATCTCCACGTCTAAAGAAGCCATTCTAGAATCAGCAACAGAAGCAATCCTTCGAGAAACATCAACAAGTTCGTTTTTTATGTTCAATTCCCTTTCCTTCCAGAAAATACTATCTTTTTCAACCTGAAGAATTTCCGAATGGAGGAGATAAGCTTTCACAATACAATCACAAAGATGCGTTCATGAAAACCGCAATAGAGATATATAACCTGCAGTTTCTCAAGCAAAGCCATATACTTGAACACTGCTTCTTTAGATCTTTTCAGCTGGTCTTTCAAAGAAAGGCAGGCTTGAGAAGATGAGATGCCCCTCACAGACTTTGACTTGTTCTAGCAAGAGGAAGAAGCTACATTACACAAGTTTTCCACACAAGTAGATACTCTAATTAAATCAATAAACTTACCTGCAAAATGCTAACTTTTTCAAGAATCTTTGTCCTCTCCTCATGAAGATCTTTTAGCTCTTGTAGCCTGCTTGAAGCTAGGACCTACAAAATCCAGGCTGCTATCAAACCAACACTCCTCAATGAAACACACAAAAACCAAAAAAAAAAAGAAGGAAATATCACCGTTAACTCTTTTAGAACCCTTTCCATGTCTTGCAGATCCCTTTGTTTATCTCTTGTCTTCTCGCTACTAGCAAGCTTATTCCCAGGGCTCAGCACCGGGAAGAACGCCCCTGCTGTTGCATCCCTTTCCGCTCTCAGTGCCGACAAGTCACCATTACATTGTTGAAGCTCCACGACCTCATCCTCTAGCTCCCCTTCACGAACAACCAAGTAAAGTATAATGTCAGCTCATGTAGCAATCAAAATGTGATAATCTTTGAGAACGCATGTAGAGTTCTAAACTTTAGCTACAGAGACTAAGTAGCTACCTCTTATGCGTTTAAGGTCAGCTCTAACTCTAGCATCGGCATCTCGATAGCTCTGCAATTCTCTCGAAAGTGATTTGAACTTCACAAGTACATCATCTAGAGCCACTCTGAAACTTTTAACTTCTGATTCCAACTCATTCAGCGCTAGCTGCTGACCACACAAATCTAGAATGGAATGCAATATTAAAGTAATAATAAAGAGCTGAAAATCAATTGTAGTGGAAGTAAAGCAATACCGGTTCTGAGAACTGTGGGATACAGTTCATCCTTCAGACACCTTACACCATTAGTCGCAGCTACTAGGTTATGCAATGTTTGCTTCACCTGACTTGATGTATTATTCCCTCTATTTTCTTCCATCCCATTCGAGCAGATACTGGATGAGGAGCTCTCAGTGGCACCAGTTTCAAGTAGCCGGTTGATGAAATCGTCTTTAATATCCGGAGAAGACACATCTGCGTCAACAAGACATGTGAGTATCATATATAACACCGGATTCAAACTAGGTCCTAGCATCAACAGAAGGTAGAAAGAGTCTGGCTAAGCAGTTCATACCCTCCTTGTTTACAGACCCACTGCTAGAACCACTCACACGAACGGAGCATGACTCCACTGCATCTGTAAGCTGCTACAAAAACATTAGTTAGATTCAAGTTTATGTTAGAAGGCAAAGCAAGATAGAGTGTTACCTTATCCCAAGACTTATGAACAGTCTTCAAACTGGAACTGTACGGCAACTGTTTATCCTTGATCTGAGAAAGCCTATCTTCAAGAATAGAACACTCCACCTGATGAGCCTCTAGCTTTTGCGATAGCTTCAAGTTTTGAAACTGAAGGACTGCAGTATCAAGCTGTATCAAACAAGAACCAAACTCTTAAAGAGGCAGAATCATTGATTAAGATTAGTCAGCTATAGATATATGTGCAAGGGCATGCACAAAGGGAGAACCTTGTCTTCGGAGGAGGGCCAAAAGAAGGGCTGTTTCTTAACGGCGGCTGCAGCCTCCGTGGGTGATATGGAGCTAAAGTGACGTTTTTTACGGTCAGGCTCGCCTGTGCTCGTCATTCAGAAGCCCTAATAATCGGAAAGGACAAAGCTTTTCTCTCACATCAGATTGAGTGGAGGAAACTCTCCACAACAACACACAAACCCAAACTTTCAAAACCCTAGACGATCTATATCATTCACTAACCAAGCTAGGGTAATTGATTCAAACCAAGAACAATTCAACTGCTCCAGCTCCCCCCCCCCCCCCAAGAATAAAGAAAAGGAATATAATTCAAACCTCAAACTCTAGTTTTCTCTTACACAGAGACCTTCTTCTCTGATCATTTGTTCGACTGATGCTGCAAAAGCACTCCCACGCGAACACACAGCACTCAAAGAGAGAAAACAAAGGAGAGATGAAGTTTAATTCTCCTAAAAGG
CDS Sequence
- >BnaC04G0055200ZS
ATGACGAGCACAGGCGAGCCTGACCGTAAAAAACGTCACTTTAGCTCCATATCACCCACGGAGGCTGCAGCCGCCGTTAAGAAACAGCCCTTCTTTTGGCCCTCCTCCGAAGACAAGCTTGATACTGCAGTCCTTCAGTTTCAAAACTTGAAGCTATCGCAAAAGCTAGAGGCTCATCAGGTGGAGTGTTCTATTCTTGAAGATAGGCTTTCTCAGATCAAGGATAAACAGTTGCCGTACAGTTCCAGTTTGAAGACTGTTCATAAGTCTTGGGATAAGCTTACAGATGCAGTGGAGTCATGCTCCGTTCGTGTGAGTGGTTCTAGCAGTGGGTCTGTAAACAAGGAGGATGTGTCTTCTCCGGATATTAAAGACGATTTCATCAACCGGCTACTTGAAACTGGTGCCACTGAGAGCTCCTCATCCAGTATCTGCTCGAATGGGATGGAAGAAAATAGAGGGAATAATACATCAAGTCAGGTGAAGCAAACATTGCATAACCTAGTAGCTGCGACTAATGGTGTAAGGTGTCTGAAGGATGAACTGTATCCCACAGTTCTCAGAACCGATTTGTGTGGTCAGCAGCTAGCGCTGAATGAGTTGGAATCAGAAGTTAAAAGTTTCAGAGTGGCTCTAGATGATGTACTTGTGAAGTTCAAATCACTTTCGAGAGAATTGCAGAGCTATCGAGATGCCGATGCTAGAGTTAGAGCTGACCTTAAACGCATAAGAGGGGAGCTAGAGGATGAGGTCGTGGAGCTTCAACAATGTAATGGTGACTTGTCGGCACTGAGAGCGGAAAGGGATGCAACAGCAGGGGCGTTCTTCCCGGTGCTGAGCCCTGGGAATAAGCTTGCTAGTAGCGAGAAGACAAGAGATAAACAAAGGGATCTGCAAGACATGGAAAGGGTTCTAAAAGAGTTAACGGTCCTAGCTTCAAGCAGGCTACAAGAGCTAAAAGATCTTCATGAGGAGAGGACAAAGATTCTTGAAAAAGTTAGCATTTTGCAGAACAAGTCAAAGTCTGTGAGGGGCATCTCATCTTCTCAAGCCTGCCTTTCTTTGAAAGACCAGCTGAAAAGATCTAAAGAAGCAGTGTTCAAGTATATGGCTTTGCTTGAGAAACTGCAGGTTGAAAAAGATAGTATTTTCTGGAAGGAAAGGGAATTGAACATAAAAAACGAACTTGTTGATGTTTCTCGAAGGATTGCTTCTGTTGCTGATTCTAGAATGGCTTCTTTAGACGTGGAGATACAGAAACAGCATGATGAGAAAGCGAGAATCAAGACTAGATTGGGAAACATTTCGAAAGAGCGAGGTAGAAAAGAACTCTTTGCAGATACGAAGGCGTTAGTGTCTTCGTTCCCAGGGGAAATGAGTTCCATGCGAAGTCAGCTAAGCAATTACAAAGAGACTGCTGGAGGTATTCATTCTCTGCGGGCTGATGCCCAGTCCCTCTCCGGGGTTCTATGTAGGAAGGGAAAAGAGTGTGAAGCATTGCATCTGAGATCAGCTGGTTATGCTTCTCAGTTACGTGACCTGAATGCTACGGTTCGTGATCTGAAGAACAGTCACGAGGAGTTACAGTTGTTTCTGGACATGTTTAAACGCGAGTCCACTGATCCGAGGGACATAGCTGAAGCCAAGGAACAAGAGTACAGGGCCTGGGCTCATGTTGAAAGTTTGAAGACCTCCCTTGATGAGCAGAATCTCGAGCTGCGCGTTAAGGCAGCAAACGAAGCTGAGGCAGTATCACAACAAATGTTGGCTGCTGCGGAAGCTGAGATTGCTGATTTAAGACAGAGAATGGATGATTGCAAACGGGATGTGGCAAAGCATTCTGATGTCTTGAAATCCAAAAATGAGGAACATGGAACATATCTTTCTGAAATAGAGACAATTGGAAGTGCCTACGAGGACATTGTACCACAAAACCAACAGCTTTTGCTTCAAGTCACTGAGAGGGATGACTATAACATCAAGCTTTTCTTGGAAGGCATAACTTCAAGGCAGATGCAAGATGCCCTGCTAATAGGTAAATACATCATGGATAAAGATATTCAGCAAGCCAGTGCATCAGCAAGTTTCCTCTCCAAGAGATCCTTAAGAATTGAAGATCAGATGAGGCTCTGCACAGATCAGTATCAGAGACTAGCGGAAGATAAATATCAGAAGTCAATCACTCTTGAGAATCTGCAAAAGAAGCGTGCAGATGTTGTGAATGGCTTGGAACAAGCTAGGTCAAAGCTGGAGGAGTCGCATTCTAGAGTTGAGAAAAGTCGGGTGGACTATGGAGCATTGGAACTTGAGCTGGAAACCGAAAGGTTCAATAGGAGAAGGATAGAAGAGGACATGGAAACAGCCAAGAAGAAAGTTTCTCGTCTTAGGTCTCTGATAGAAGGATCCTCAGCCACTCAGAAACTCCGTCAAGAACTCAGTGAATTCAAAGAGATCTTGAAGTGTAAGGCCTGCAACGACCGCTCAAAAGAGGTGGTGATCACGAAGTGCTTCCATTTGTTTTGCAACCCATGTGTGCAAAAGATCATAGGAACTCGACAGAGGAAGTGTCCAACTTGCTCAGCAAGTTTTGGACCCAACGATATCAAGCCTATCTACATATGA
Protein Sequence
- >BnaC04G0055200ZS
MTSTGEPDRKKRHFSSISPTEAAAAVKKQPFFWPSSEDKLDTAVLQFQNLKLSQKLEAHQVECSILEDRLSQIKDKQLPYSSSLKTVHKSWDKLTDAVESCSVRVSGSSSGSVNKEDVSSPDIKDDFINRLLETGATESSSSSICSNGMEENRGNNTSSQVKQTLHNLVAATNGVRCLKDELYPTVLRTDLCGQQLALNELESEVKSFRVALDDVLVKFKSLSRELQSYRDADARVRADLKRIRGELEDEVVELQQCNGDLSALRAERDATAGAFFPVLSPGNKLASSEKTRDKQRDLQDMERVLKELTVLASSRLQELKDLHEERTKILEKVSILQNKSKSVRGISSSQACLSLKDQLKRSKEAVFKYMALLEKLQVEKDSIFWKERELNIKNELVDVSRRIASVADSRMASLDVEIQKQHDEKARIKTRLGNISKERGRKELFADTKALVSSFPGEMSSMRSQLSNYKETAGGIHSLRADAQSLSGVLCRKGKECEALHLRSAGYASQLRDLNATVRDLKNSHEELQLFLDMFKRESTDPRDIAEAKEQEYRAWAHVESLKTSLDEQNLELRVKAANEAEAVSQQMLAAAEAEIADLRQRMDDCKRDVAKHSDVLKSKNEEHGTYLSEIETIGSAYEDIVPQNQQLLLQVTERDDYNIKLFLEGITSRQMQDALLIGKYIMDKDIQQASASASFLSKRSLRIEDQMRLCTDQYQRLAEDKYQKSITLENLQKKRADVVNGLEQARSKLEESHSRVEKSRVDYGALELELETERFNRRRIEEDMETAKKKVSRLRSLIEGSSATQKLRQELSEFKEILKCKACNDRSKEVVITKCFHLFCNPCVQKIIGTRQRKCPTCSASFGPNDIKPIYI