Information report for BnaC04G0011300ZS
Gene Details
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Functional Annotation
- Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.;MYB transcription factor MYB114, LATE ELONGATED HYPOCOTYL 2 gene b
Homologous
- Arabidopsis thaliana: AT2G46830.1
- Brassica oleracea: XP_013637509.1, XP_013637508.1, Bo4g006930, XP_013637507.1, XP_013637506.1
- Brassica rapa: XP_009142594.1, Bra004503, XP_009142593.1
- Raphanus raphanistrum: RrC3039_p4
Gene Resources
- Pfam: PF00249
- UniProt: A0A1B1W0H6
- EMBL: KU292583
- AlphaFoldDB: A0A1B1W0H6
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF177
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- SMR: A0A1B1W0H6
- CDD: cd00167
Sequences
gDNA Sequence
- >BnaC04G0011300ZS
AACAGTTTATGATTTTGTTTGATAATACAGAGTCAAACGTTACAAGAAGACTATGGACAAAATACAAATGCCTCAAAGACAGAAGAAGATTGTATCAGTGAGATCTTGAAACTTGAATGAAAACAGAGAAACAACAGATGTAATAATAAGAGTTACAACTTTTTTCATGTTGAAGTTTGAGTTTCCAACCTAATCCGCTTAGGATCTTTCTGTTCAACACTGATGATAGGATTGGTGTTGTTGATGACTCTACTTTCTTTAGCTTCCATTGAACATCTTTTGTAAGGCTTGAAACCTGTCCTTCCTCTACTTAGCTGCTGCTTTGAAGCACCCAAAAACGCTATGTTTCTGTTCTCTTCTTGATCATCAGCTGTGGAGTTAAGATCAAGCTCCATTGGATAACTTTGTTGTTGACCCTCCTCTCTCTGATATGTAAAACTTTGTGGCAAAACTTCTCTTGCAAAGAGAGCTCTAAAAGCAATTCGTCCCTGAAAAAAATACAAAATATTTTGGTGAATAAACGATTTTAAATAAAAGGAAGTTTTGAATCTTTTTTCGTTTTAAGTACCTCATCTGAAACAGACTTCCATGGATCAGCTAAGATAGAGCTACTGATTCTACTGCGTCGCGCATTAGATTCTGAAGTTTGTGGGTTGTTAGTAGTGTCCCCATCCACTTCTTTCACTTCCTCATTGGTGGTGCCACCATTCTCTTGCCTCTCCACCAAAGCATCAGCCTCAACATCGTCACTACTCGAGGGAGTGTTCGAGCCACAAGAAGACCTGTCAACTTGTTTCCTATCTCTAGCTCCATCTGATCCCTTTGCATCAGTCTCAGTCGCTGCACAAGTATGATGATGACAATCTGGTTGACTCCCATTTTTAGTCTCCTCTGATTCCAACGAAGACCGAGCCTTTGAAGCCTCGGAGTGTTCTTGATCCATTGTTTTTGTGAGGGCGTTTACTTCATAAGTAGTTGGAGGGTTGCCTGAACTAAAAGGAGGAGCGCAGAGTGGGAGCATCCCATTGGCGGCCCACCAAGCACTTGCAGCTGCAACGGTGGCTGCAGCCATGGCAGCCAAGTTCCCTTGTGGGCCGCCACCAAACGTTGAGGCAAAAGATGCAGCTGTATAGAGAGCTGGTGTTTGTAAAAGGGTCGACATGATATGTTCAGGAAAGGACTGATGACTATTCTCGTCTGGCTGTGAAGGAGGAGCATGTGACAGAGAGGTTGTACCCAATGGAACTAGCAGAGGGATATGCGTTGGATAAGTGTGAGGTCCTCCTGCCTCTATATTCAAATCACTGTAGTTTGACTCCTTGTTATTCCCCTGTTCCTTCCCTCCCATATAGTTTCATGAAAAGTACATTTAAAACCTCAAATAGCAATTGTAAGATTGTTTCTAACCTGTTCCCGTGAAGGTAAGAACTCTAGAAAAGTGCTTGCGTTTGATGCAGCAGAGAGGTGTTGATGAGTGAGACAGTCTGAGCAGTTGTCTTCCTGCAGATCTTCATTGGTCGTCTGAAAAAACAAAGCATACAATCTGTATCAATTACATTGACATACTACAACAAGATGTCTTTGATTGACCAGTAAGTTCACCTCAGGAAGAGAAGCTTTTGCTGATCCAAGGGACTCTTTTGCATCGTTCAGACCCGTTTTAGAGATGGGGAGAGATCCAGTTCCGGTCTTTCGAGGATAAGGATTGTTTGGTTTACGTTTAGGGCGTGGAGGAGGGATAGCTATGTCTAGCGCTTGAGCCACTGGTACACCTTTAGCTTCAGCCTCTTTCTCTACCTGAGAGATGAGAAATTAGTCTTGTTACCCTCTAGATAAGCAAAAAAAAATCTATTGGGATCTAATGAAACTAGTAAGAACTTAAAATGAAAATTAAAATTGTTAACTCTATGGCTTATCACAAAGAACAATAAACATATCCTGCCACTAACTCAGAATCGGTAAGACTTCTAATAAGGAAGAATTTTTTATATTCATTATGTGTGAAATCGGTTTATATTGCTAAAATCCAAATTTTCAATAGAAACTAAACATTCTTCTGAAGATACTAACCATACAACATATATGCATAACAGCCAAACAAATGATCACACTCTTTATCTCAAGTACCTTGTTACCTCATCTCTACTTATTTCTCCAACTATCTTATAGCTCACATTACTAGTACGCAAAGCTAACTCTTAACAAAAGCAAGAAGCAGAAAGACTTGCATGTCTGTCACAACAGTAGTTCAAATAAACCAAATTCAAAGTTATTACCTTGGAGAAAAATTTCTGAGCATGGCTTCTAATCTGCACAGCAGTTTTCGTTGCTACATGTTCTGTCCAAATGATGAAAAATCAAATCAGTTTGAAGAAACAAAGCAAAAAGAGCCACATCTACAAGACAAGAACATTTCTTAGAAAAAACAACCTTCTATCTTTTGCCAAGCTCTACCGTAAAGCCTCAAGGCATCAAGGAACCTATTATGTTCTTCCTCAGTCCATCTTTCACGTTGCTTTGTTATCGTATACGGCTTCCTCGTCTAATATTAATTTTTTTTTATTACAACAAACAAACAAAAAAAAAAACACAAAAGTTTCCATCTTTGTTTTTCAAAAAAAAAAAAGTTTCCATCATTTGGTCTTTCACCTTAACAAACATTAGCCTACTAAAAGTTAAATTATAGTTACCTTAACAACCAGATCTTCTCCAGACGAATTTGTCTCCATCACTAATCCTTAGAAGCTAAAACACACACACACACACACACAGCTTCAGATCCTCTCCCACAAGATTCTTCGATTTAAACTAATACACAGAAACAAACAATCGATTGAGAAACTAGAAACACTCGAGGCAAAAGAAAAACAGTATTGAAAGTACCTCAGTGAGAGATTCAATGGAAGATGACAACACTTGGAACGAGCTAGCAGAGATCGGAGAATCGAAGAAACAAAGCTCAGCCTGGAGTAGCTGAAGATCCCATGGTTATCTTTTGCTTCCTGATTACTCGGAGAAGAAGGGAGAAGAAGAAACAAAGACTCTCTCTGTGTGCCTTTTGATCAATGAGACCTGTGGGAGATGGACAAATCTC
CDS Sequence
- >BnaC04G0011300ZS
ATGGAGACAAATTCGTCTGGAGAAGATCTGGTTGTTAAGACGAGGAAGCCGTATACGATAACAAAGCAACGTGAAAGATGGACTGAGGAAGAACATAATAGGTTCCTTGATGCCTTGAGGCTTTACGGTAGAGCTTGGCAAAAGATAGAAGAACATGTAGCAACGAAAACTGCTGTGCAGATTAGAAGCCATGCTCAGAAATTTTTCTCCAAGGTAGAGAAAGAGGCTGAAGCTAAAGGTGTACCAGTGGCTCAAGCGCTAGACATAGCTATCCCTCCTCCACGCCCTAAACGTAAACCAAACAATCCTTATCCTCGAAAGACCGGAACTGGATCTCTCCCCATCTCTAAAACGGGTCTGAACGATGCAAAAGAGTCCCTTGGATCAGCAAAAGCTTCTCTTCCTGAGACGACCAATGAAGATCTGCAGGAAGACAACTGCTCAGACTGTCTCACTCATCAACACCTCTCTGCTGCATCAAACGCAAGCACTTTTCTAGAGTTCTTACCTTCACGGGAACAGGGGAATAACAAGGAGTCAAACTACAGTGATTTGAATATAGAGGCAGGAGGACCTCACACTTATCCAACGCATATCCCTCTGCTAGTTCCATTGGGTACAACCTCTCTGTCACATGCTCCTCCTTCACAGCCAGACGAGAATAGTCATCAGTCCTTTCCTGAACATATCATGTCGACCCTTTTACAAACACCAGCTCTCTATACAGCTGCATCTTTTGCCTCAACGTTTGGTGGCGGCCCACAAGGGAACTTGGCTGCCATGGCTGCAGCCACCGTTGCAGCTGCAAGTGCTTGGTGGGCCGCCAATGGGATGCTCCCACTCTGCGCTCCTCCTTTTAGTTCAGGCAACCCTCCAACTACTTATGAAGTAAACGCCCTCACAAAAACAATGGATCAAGAACACTCCGAGGCTTCAAAGGCTCGGTCTTCGTTGGAATCAGAGGAGACTAAAAATGGGAGTCAACCAGATTGTCATCATCATACTTGTGCAGCGACTGAGACTGATGCAAAGGGATCAGATGGAGCTAGAGATAGGAAACAAGTTGACAGGTCTTCTTGTGGCTCGAACACTCCCTCGAGTAGTGACGATGTTGAGGCTGATGCTTTGGTGGAGAGGCAAGAGAATGGTGGCACCACCAATGAGGAAGTGAAAGAAGTGGATGGGGACACTACTAACAACCCACAAACTTCAGAATCTAATGCGCGACGCAGTAGAATCAGTAGCTCTATCTTAGCTGATCCATGGAAGTCTGTTTCAGATGAGGGACGAATTGCTTTTAGAGCTCTCTTTGCAAGAGAAGTTTTGCCACAAAGTTTTACATATCAGAGAGAGGAGGGTCAACAACAAAGTTATCCAATGGAGCTTGATCTTAACTCCACAGCTGATGATCAAGAAGAGAACAGAAACATAGCGTTTTTGGGTGCTTCAAAGCAGCAGCTAAGTAGAGGAAGGACAGGTTTCAAGCCTTACAAAAGATGTTCAATGGAAGCTAAAGAAAGTAGAGTCATCAACAACACCAATCCTATCATCAGTGTTGAACAGAAAGATCCTAAGCGGATTAGGTTGGAAACTCAAACTTCAACATGA
Protein Sequence
- >BnaC04G0011300ZS
METNSSGEDLVVKTRKPYTITKQRERWTEEEHNRFLDALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEKEAEAKGVPVAQALDIAIPPPRPKRKPNNPYPRKTGTGSLPISKTGLNDAKESLGSAKASLPETTNEDLQEDNCSDCLTHQHLSAASNASTFLEFLPSREQGNNKESNYSDLNIEAGGPHTYPTHIPLLVPLGTTSLSHAPPSQPDENSHQSFPEHIMSTLLQTPALYTAASFASTFGGGPQGNLAAMAAATVAAASAWWAANGMLPLCAPPFSSGNPPTTYEVNALTKTMDQEHSEASKARSSLESEETKNGSQPDCHHHTCAATETDAKGSDGARDRKQVDRSSCGSNTPSSSDDVEADALVERQENGGTTNEEVKEVDGDTTNNPQTSESNARRSRISSSILADPWKSVSDEGRIAFRALFAREVLPQSFTYQREEGQQQSYPMELDLNSTADDQEENRNIAFLGASKQQLSRGRTGFKPYKRCSMEAKESRVINNTNPIISVEQKDPKRIRLETQTST