Information report for BnaC03G0366000ZS
Gene Details
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Functional Annotation
- Encodes a protein with similarity to mammalian nucleoporin Nup98.Its expression is upregulated in mutants that are NUP deficient. Nucleoportin which redundantly inhibits flowering together with Nup98a through multiple pathways including clock, photoperiod, and age pathways. Gates flowering in a CONSTANS (CO)-independent mode and bypasses the CO checkpoint in photoperiodic signaling and integrated signals from multiple pathways to directly target FLOWERING LOCUS T (FT) for flowering control.
Homologous
- Brassica oleracea: Bo9g046570
- Brassica rapa: Bra018441
- Glycine max: Glyma.10G172000
- Gossypium hirsutum: Gohir.D03G088800, Gohir.A02G094700
- Hordeum vulgare: HORVU3Hr1G034780
- Lactuca sativa: gene-LSAT_6X80720
- Populus trichocarpa: POPTR_011G148800v3
- Saccharum spontaneum: Sspon.05G0008570-2D, Sspon.08G0022670-3D
- Setaria italica: SETIT_025940mg
- Setaria viridis: SEVIR_8G000800v2
Gene Resources
- Pfam: PF04096
Sequences
gDNA Sequence
- >BnaC03G0366000ZS
TAAAAATGTTCGACCTTAAACTTCCACTCGCCATTCACAGAATCATAAGACACGAACTCAGCTCCTTGTTCTTCAGCTTTCCTCTTGAGCATTTCCTTAGACTTCTCCACCCTCGGGCCTTCCTTCACTTGCTTCCCGCTCTTCTTGTCCATGCATTTTATGTTGAGCAACGTTACTTCCGCTGGCTTGTTCAGTCCCTGACCAACAGGAGGTTTTTGGCTCTCGTCCATGTACACAAGCACTTCCCTGTTGCTGAACTGAACCAACTTTTCCAAGTCGAGCTTACGCACATCCGTGTCTCCTAGAAACTTAATGCTTCCGTAACCGTGTCTACCGACAACAAAGTCCCTCACTCGTCCGGTATAACCAGGATTAGCCCTTTCCTTTGCAGCTAGCTCTTGGACCCGAGGCTCTGTGAAATACTCAGCTTTGGCAGCAATGACTCGATCTCTGCTCTACTTGGTGAACTCTTTGAGCCGTTCTTGTCGCCTCCGTGATTTTCATGTGCCACGTTAAGTTTCTCACTGGCTTTTACCGGAGGAGCATCACGAACTTCACCATTATTCTTATTCTCGTTGTTGGCTCCATTAGTAATAACCCCATTCGATATCTTACCATTCTCCTGCAGAGGGGTCGTCTCATCCTTCAGCGGTGCTGCTGTTTCCTTTTTAAGTGAGCGTATTAACAAAGCTCTCGGGTTTTCCCTTGGAGTGAGAAACGCATCAGCCCTAGCTAGGTGTATTGGAGTTCTCTTCATCACTGAAGAATGGAACCTTTGGACTATCATCCCCAGCACGGTACTTTCTTGCAGGCAGCATGACCCGCCTTTGCAAAAGATGTCGAGAAGTCAGGAGTGGTGACACTCTGGCTGGTGCAGGTCTATCAACGACAGGCAAGCTGGAGATTCCATACTGAATCGAAGGTGAATTTCCACCTTGACCAATTGAAATCTGAGGGACAGCAGGAAGCGTTCCAAATGGGCTTGTATTTAAGGAAGGAAAGCTTGTAGACATGTTTAGGAATCCAGTGGAAGGTGTACTGAAAATGCTAGGTTGGGTATTTGTATTTTGTCCAAACCCAGTCTGCGCAAATGAGGGGCTTGAGCTAAACAGCGGAGCTGACTGACTGTTGTTAAAGTATCCACTGCTAAATGCTGGAGATGACCCTTGTGCAGGAGTCGAACTAAACAGTGACGGAGAGGAGCCAGATGAACTGAAGACTGACGAAGAGGCAAATGAAGGAGTGCTTGATGGACCAAATGGCTGCGTTGTGGTTGCTGCAAAACCAGAGAGGATGGTCCAAAACCGGGTGTGGTATTTGATGAAGTTCCAAACAAGGATGGGGTAGTAGGTTGGCCAAAGGGAGACGAGAAATTTGTGTTAGTTGCTGAAAGGGTTTGGTGTGCTTTGAAAGGGGTTTGTTGGGTTTGCAGATGTCTGGCCGAAAGGGCTTGGGGTTGGTGCTGAAAGGGTCTGGCCGAAAGGGTTTGGGTTTGGGGCTATTGTGCTTTGAAAGGCGTGTGTTGGATTTGTAGGATTGGTAGATGTCAGGCCGAAAGGGTTCGTGGGCTGAGAAGAGAACACACTAGTTTGACCCGCAGGAAGTTTTCCACCTTTATCTCCTCTCTGGAAATCCTCCCACCTGAGCTCCTCATGGCATTTGTCTTTGTGGACAGTCATAGCAGAAATAGACTGTAGCTTCCCAGGGCCTCCAGTTCCAGACTCTGCATCTATTGTAGATGTATATGGAATGATTCTACTACCACCTTGTTGTTGATTTCCAAAGGTTGTTGAGTTCGAAGACTGAGAACCTTGAGCTCCAAAGGGAGAATGCGTAGCTGGGGAGGAGCCAAAACCAAAGGCAGGAGTGGTTGAAGCGCCAAACGCAGGAGCGGTTGAAGCGCCAAACCCAGGTGTACCAAAAGCACCTCCAGAACCAAAAGCATTGTTGCCAAATGCACTGCCAGAGTTACCAAAGGCAGGAGTGGGTGACACGCCAAATGCAGGTGTGCTTGAGGCACCGAAGGCAGATGTATTGGAGGAGCCGAAGGGTGTAGATGACCCGAAAGTGCTGTTTCCAAAAGCAGGCTGTGACTGTTGTGTGGTGCTTCCGAAAGGACTTGACTGAGGCGTTGAGGAGCCATTATGTCCAAAGGTTGGAGTGCCACCAAAAGGTGAAGGAGAATTGCCAAAGGCAGGAGCAGAAGGTGCTCCAAAGCTCGGAGTAGAGCTCCCAAACCCTTGTGATGAAGCACCGAAAGGGGAGGAAGCTTGAGCCTGACCAAACATAGAACCACCAGTCTGCGCGCCAAAAGGACTAGAAGCACCACCAAAGGGTTTTGGCGCAAAGGGATTATTACTAGACGCGTTGTTGTTCTGACCAAACACAGATTGAGTTTGGGTCCCAAAAGGACTGCTGCTGTTAGATCCCTGTCCAAAAGGATTAGATGCGCCAAACAT
CDS Sequence
- >BnaC03G0366000ZS
ATGTTTGGCGCATCTAATCCTTTTGGACAGGGATCTAACAGCAGCAGTCCTTTTGGGACCCAAACTCAATCTGTGTTTGGTCAGAACAACAACGCGTCTAGTAATAATCCCTTTGCGCCAAAACCCTTTGGTGGTGCTTCTAGTCCTTTTGGCGCGCAGACTGGTGGTTCTATGTTTGGTCAGGCTCAAGCTTCCTCCCCTTTCGGTGCTTCATCACAAGGGTTTGGGAGCTCTACTCCGAGCTTTGGAGCACCTTCTGCTCCTGCCTTTGGCAATTCTCCTTCACCTTTTGGTGGCACTCCAACCTTTGGACATAATGGCTCCTCAACGCCTCAGTCAAGTCCTTTCGGAAGCACCACACAACAGTCACAGCCTGCTTTTGGAAACAGCACTTTCGGGTCATCTACACCCTTCGGCTCCTCCAATACATCTGCCTTCGGTGCCTCAAGCACACCTGCATTTGGCGTGTCACCCACTCCTGCCTTTGGTAACTCTGGCAGTGCATTTGGCAACAATGCTTTTGGTTCTGGAGGTGCTTTTGGTACACCTGGGTTTGGCGCTTCAACCGCTCCTGCGTTTGGCGCTTCAACCACTCCTGCCTTTGGTTTTGGCTCCTCCCCAGCTACGCATTCTCCCTTTGGAGCTCAAGGTTCTCAGTCTTCGAACTCAACAACCTTTGGAAATCAACAACAAGGTGGTAGTAGAATCATTCCATATACATCTACAATAGATGCAGAGTCTGGAACTGGAGGCCCTGGGAAGCTACAGTCTATTTCTGCTATGACTGTCCACAAAGACAAATGCCATGAGGAGCTCAGGTGGGAGGATTTCCAGAGAGGAGATAAAGCAACCACAACGCAGCCATTTGGTCCATCAAGCACTCCTTCATTTGCCTCTTCGTCAGTCTTCAGTTCATCTGGCTCCTCTCCGTCACTGTTTAGTTCGACTCCTGCACAAGGGTCATCTCCAGCATTTAGCAGTGGATACTTTAACAACAGTCAGTCAGCTCCGCTGTTTAGCTCAAGCCCCTCATTTGCGCAGACTGGGTTTGGACAAAATACAAATACCCAACCTAGCATTTTCAGTACACCTTCCACTGGATTCCTAAACATGTCTACAAGCTTTCCTTCCTTAAATACAAGCCCATTTGGAACGCTTCCTGCTGTCCCTCAGATTTCAATTGGTCAAGGTGGAAATTCACCTTCGATTCAGTATGGAATCTCCAGCTTGCCTGTCGTTGATAGACCTGCACCAGCCAGAGTGTCACCACTCCTGACTTCTCGACATCTTTTGCAAAGGCGGGTCATGCTGCCTGCAAGAAAGTACCGTGCTGGGGATGATAGTCCAAAGGAGAATGGTAAGATATCGAATGGGGTTATTACTAATGGAGCCAACAACGAGAATAAGAATAATGGTGAAGTTCGTGATGCTCCTCCGGTAAAAGCCAAGCCTCGGGTCCAAGAGCTAGCTGCAAAGGAAAGGGCTAATCCTGGTTATACCGGACGAGTGAGGGACTTTGTTGTCGGTAGACACGGTTACGGAAGCATTAAGTTTCTAGGAGACACGGATGTGCGTAAGCTCGACTTGGAAAAGTTGGTTCAGTTCAGCAACAGGGAAGTGCTTGTGTACATGGACGAGAGCCAAAAACCTCCTGTTGGTCAGGGACTGAACAAGCCAGCGGAAGTAACGTTGCTCAACATAAAATGCATGGACAAGAAGAGCGGGAAGCAAGTGAAGGAAGGCCCGAGGGTGGAGAAGTCTAAGGAAATGCTCAAGAGGAAAGCTGAAGAACAAGGAGCTGAGTTCGTGTCTTATGATTCTGTGAATGGCGAGTGGAAGTTTAAGGTCGAACATTTTTAG
Protein Sequence
- >BnaC03G0366000ZS
MFGASNPFGQGSNSSSPFGTQTQSVFGQNNNASSNNPFAPKPFGGASSPFGAQTGGSMFGQAQASSPFGASSQGFGSSTPSFGAPSAPAFGNSPSPFGGTPTFGHNGSSTPQSSPFGSTTQQSQPAFGNSTFGSSTPFGSSNTSAFGASSTPAFGVSPTPAFGNSGSAFGNNAFGSGGAFGTPGFGASTAPAFGASTTPAFGFGSSPATHSPFGAQGSQSSNSTTFGNQQQGGSRIIPYTSTIDAESGTGGPGKLQSISAMTVHKDKCHEELRWEDFQRGDKATTTQPFGPSSTPSFASSSVFSSSGSSPSLFSSTPAQGSSPAFSSGYFNNSQSAPLFSSSPSFAQTGFGQNTNTQPSIFSTPSTGFLNMSTSFPSLNTSPFGTLPAVPQISIGQGGNSPSIQYGISSLPVVDRPAPARVSPLLTSRHLLQRRVMLPARKYRAGDDSPKENGKISNGVITNGANNENKNNGEVRDAPPVKAKPRVQELAAKERANPGYTGRVRDFVVGRHGYGSIKFLGDTDVRKLDLEKLVQFSNREVLVYMDESQKPPVGQGLNKPAEVTLLNIKCMDKKSGKQVKEGPRVEKSKEMLKRKAEEQGAEFVSYDSVNGEWKFKVEHF