Information report for BnaC03G0260200ZS
Gene Details
|
|
Functional Annotation
- Sequence suggests this encodes a MADS-box transcription factor. Negatively regulates the FLC/MAF clade genes and positively regulates FT in Arabidopsis.
Homologous
- Arabidopsis thaliana: AT2G45650.1
- Brassica oleracea: Bo3g038870, XP_013634383.1, Bo4g024840
- Brassica rapa: XP_009133732.1, Bra000392, XP_009133733.1, XP_009143157.1
- Raphanus raphanistrum: RrC6965_p3
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A816I6G8
- EMBL: HG994367
- AlphaFoldDB: A0A816I6G8
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS50066
- Gene3D: 3.40.1810.10
- SMR: A0A816I6G8
- CDD: cd00265
Sequences
gDNA Sequence
- >BnaC03G0260200ZS
TGGGAAGAGGGAGAGTGGAGATGAAGCTAATAGAGAACAAAATCAATAGACAAGTAACCTTCTCAAAAGGAAGAAACGGTTTGATGAAGAACGCTTATGAGCTTTCTGTTCTATGCGATGTTGAAGTTGCTCTCATCGTCTTCTCTAGCTGCGGAAAGCTCTACGAGTTCGGCAGTGTCGGGTATCTTTGTGCTCCTTCGTAGCTCTTAATAATATTCAATAAAGTTAGGTTTCTTAGAGCATGTTTATTAGTGAAACCCATTAGTGTCTCTTAGGTAGGTTGTAATGATTTTTTAATTATTAAAATTATGATAAGAGACTTTGCTAAGAGACAGTTAATTATAGGAGTTTATTGGTGGTATCTTAATTAAGGTTCTTAACAATAAAAAAAGATTAAATTTATTTTTAAACATAATCACATTTTAGTTGTTCATGCGCTTGTCTATCACGAATTCTTGTTCGAACACCCATCTGGTTGGCGATATTAGTAGGGATATCTGTAGAATAGGTGAGAACAACATGTGAACTTCCGCTCCCTTCTCCTTGTTGGAAATCTGAGACATCATATTGAGTGTATTCATCTCGTTCGTCTTCTACTATCATATAATGGAGTATGATGCATGCTCTCATAATCTTCCCAATCTTGACTTTATCCCAACAAAGTGTCAGATTTTTAACAATGGCAAATCGAGCTTGCAAAACTCCGAAAGCCCGCTCGACATTTTTTTGGACAGCTTCTTGACATTGCGCAAATAAAACTGCTTTCGGCCCTTGTGGAATTGAAATGGATTGGATAAAAGTTGCCCATTTTGGATTAATACCATCGGTGAGATAGTAAGCCAAATGATACTCTCTTCCGTTGACCGAGAAATTCACTTGCGGGGCTCGACCATTTATTATGTCATCAAAAGCCGGTGAGCGATCAAGAACATTAATATCATTTAAGGTACCTGGAGGTCCAAAAAATGCATGTCATATCCAGATATCATATGAAGCAACCACCTCTAAAATGATTGTCTGTTTTCCCGAACCACGAGAATATTGGTCTTTCCAAGCCGTGGGACAATTCTTCCACTCCCAATGCATACAATCAATGCTTCCTATCATTCCGAAAAATCCACGAAGCTCTCCAATATGAAGAAGATGCTGAAGATCAGCCGGTGTTGGTCTTCTTAGGTACTCATCGCCGAACAAATTTATTATTGCTTCCACAAAGTTTTCCACACATAACCGAGCTGTGGTTGCACCGAGCCGGAGGTATTCATCGACCGCATCAAGCGCAGAACCATATGCCAACACACAAATAGCTGCTGTACACTTTTGAAGTGCAGATAGACCAAGTCTTCCGGTAACGTCTTGCTTTTGACGAAAGAATTGAACTTCATTGGAGAGGTGATCAACAATACGCTTGAACAATGGCTTGTTCATTCGAAATCGTCGTCTGAATAGATTTTCAGGATATGTGGGAGTGTCACTGAAATAATCATTCCATAACTGGAGATGTCCTTCTTCACGGTTTCGTTCGATAAAAACTCGTTTTTTTCTTGTCCTCCTTTCATCTTCTTGATCACCTTGATCATTGAACAGATTCTGAAATGTTTGATCAAAATGTTGATCAAAATATTGATCGAAATTTTCGTCAATTGACTCTTCGAAATTGTTTTGAGAAGAAGATACCATGAGATGATAATATATATATTTTTCTTCTGTGAAATAAGCGATGGAAAATTTTTGGGGTTACAAGATTGAATTTATTCAATCCCGGGAAAGAAGAGATGGACAACTTTTCTTATCAAAAAAGAGATTCTTGGTTACAAGATAAAATTGTTTTCTTATGAAAGAAGAGAATGGTGAGAATTGTTTTGGAGAGAAGAACATGAGATTATAGTAAAAAGCAAATGGAGAGAAGAGCATGAGATTATGGTGAGAATACAAACCAATTTATAAGTGTTCTTATACACAATCTTGTGACCTCGTGACACACACGGACAACAACAACAACAACAACAACAACTCAGACTCGTGACACACATAGACAACAACAACAACTCAAACTCGTGACACACACAAACAAGACTCCAAGGACAAAAACATTTAACGTGACACACACAGACATACATTTCTCGTGACTACACAGACAGCCCACTCCTCACCACTTCACCTCTCTCGCGTTTTCTTCTAAAATCACAGACCTCACACTTCCTCTTCTTCACCACTTCACCTCTCTCTCTTGCCTCCGACATACTCGGTCACCTGCATTACAAGAACGGTAAGGACAAAACGTTTTAGCTGAAACAAAAACGAGATCAATGTAAATATTTTAGAACAGCAAGGATAAGAACATTTGAGGACAATAAAACCAGTGACATTTTACCATTTTAAACAAACTTTGAACTACATTAACACCGTCAGAACTACATAAACATAACAAGAACTACATAAACATCAAACAGCAGAAGAACATCAGAACAATAAACATCACAAGTAACAGAATACAATGACACGACTAACTAATTAGAGAACAATTCATTTATCAGCTTCTTCTTGAGGGTTTCTTCATACTCAGCATGAGGTTCCTTTTTTTCCAATGAGACTCTCAAGCAGACTCAACCTACACAACCTATCTTTCGCGGCCAAATCTTGATGTTTGATTGTCCACATTATCTGAAACTTATTAAGCGTATTCTCATCTATCACCGTCTTCTTAGCACTCATCTTTGCGGCATTCACACCCGCAGGACGCTTGTTCTCAGTGGCTTGGGAGTTTGATGAATCTGCACCGTCCTCACACTTCCTCTTCTTTGAGCTCCCTTCGTTTTTAGCAGTAGCTAGGTCTCACCACTTCTGGTCGTGCCGGAGCTCTGTCGAAGCGTGTTCAAGCGTAAATCTCTTCTTGTAGTTGTTGTAGAATATTTGATGAGCTTGCTTCAGGACTTCATTCTCATTCTGGCCGCTTGTTCTCTCCCTAGTAGCCGCTTCATACGATCCACAGAACTTTGACACAAGGTCATTGATTCTGTGCCATCGTTGCTTGCAGTGCCCTGCCTCTCTCTCTTGGCATCCAGCCACCAGAGGACTTGCCGCAAAGTAGGTGGCAATCCTTTGCCAAAAACCAGAGGATTTTTGCTCGTTGCCCACCACTGGATCCTTGCTCGTGTTTAACCACGAGCTGATCAGCACCACATCATCCGTTGGTGTCCATTTTCGGCGTTCCGTACGCGCTGCTGCTGTGTCTCCATCAAGGTTTGAAGCTTCCGTCCCTACACTGCTGAGAAATGGAGATTGTGATGAAGATAGTTCGACACTATCTTCATACTGCCCAAAGGAAATATTTTGTTGTCTAGTAAGTAGATCAACAAATCTAGAAGGCTGGGTAGATGATGTTAAAGAATCCATATAGGAAGATAGAAAGAAAGAAAAAAGTTAAGACAGTGGGAATGAGGTTGAGCAAAGCTCGGAGAGATTGAGTAATGAGCTTTGAAATGAAATCAAGAAAGAGGAGAATGAAACTTTTAAATAGACGAGAAGGAAAAAGAGAGCATTGATCATAGGCATTCAAACCGAGTTGACATAAACCAACCACATTCATCACACATCACCATTATTTTCTATCTAACCATAAAATAAATTTATTACCTAAGCCAACCGTGAGCTAACTCTAAATTTAGTATCTAACCATAAAATCAATTTCTATCTAACCATAAATTTCAATTTATTACACCATACCTTTATGTACAATCGTGTAGCTTTCTTTGGTGTGGTCATAGAGCAGAGTCATGTGGTCTTCATTACCGTCCACTCTACATTACAAACAATATACTGCATTATCATCTAACTATCAATCGCAACTTAAATCACAAACAATGATATATCCAATTGAAGTGGGAAAATTCAACAGAGAGATAGCTTTTACCTCTATCAACAATCGGTATGTGTTTCGCCCACTATCACAAGACAATGCAACGGTAACCGAGAAACCATCACTCTCTGCTTTCTTCATCCTCCCTTAACCTTGAGCATGCCTCTTTGATCTTGCCATCTAAAGACACAAAGCCTCTTTGATCTTGCCATCTAAAGACACAAAGACATGAAAATATCAAAACAGAGCAAATAGAAAGGTTTTATCCAATTGAATTTCATTTCAAACAAGAATAAAAATCAAGAACAATCCCAACATAACTCACAAACCACCAACGAGTATAAAAAAATGGTTTATCCAATTCAAAAAATCAAAGACAAAGGTTTTACCTTTGTCAAAAATCTTGGGGTTTTCGTCTGACAAAGAGAAAGGTTTATCCTGGATCATGCCTCTTGATCAATCGATCTCAAGACACAAAGACAGAAAAAAAATTACACAAATCAGTAACAGAACTTCTTAAGATTATCGATGAAATAGCCACAATCTACGACATGCAAAGTTGAAATCTTCAAACATTAAAACATATTTTCGGACCTTTACCTTTCGATTCGCTTGAAACAGTCACCGTTCTCCTTCGTCTCCGACAGCCACCACGAGATAGATCTCGCCGTTTTCTTTGGTCGAGGAGAGAAACCGATAGAGGGGACGCCGATTTCCATCATCGACAAGAGCCACCATGAGGGGACGACGTTTCGTGGAGGAGAACCCCGAGAAGAAGAGAAATCGCCTTTTGGGTCGGCGAAGAAAGGAGCGAAGGAAGAGAGAAAGAAGGAAAAGAAGAGAAGAGACAAAACCTACAGACCCACTTTGGCTTGGTCGAATGAAGAATAGACACGTGGCTCGCAAGGGACGTGCCTTCGCTCCCTTAATTAAGGGACGGATCTTCGCTTAATTCATGTTTTCCTTTTATTTTTAATGCCATTAATCATAAGATCCAGCCTAAGAGCTGCGATAAATATGCCCTTATAAAACTGATTACGAAATGGGCTCTCTTATTACTAGCTATACCGTAAGATTCAAGAATATGATCAAGCTTTTGTCTTGTGGGTATTAATTCTTAAAGATTGTGTCTTTTATCCTACGGTAACTAGGGTTCATCGTTATACTATCTCTGTCTCTGTCTCTCTCTTGGATCCATTATTATTATTAAGCCAATGGGTTCGTACGTTCTACTTTATTGTTTGATATTTTATTTGGATCTGGATTCTTTAAACTTGAAGATGCCCAAATTCAGACGGGCTTAAAATACGAAGTTAGGGTTTCCTTTTGTAAGAAAAATCTTTATACATAATTAAACTAATTATCTCTCGTGTGTAATATTTTTTTTCTGCTGAATTTGCAGAGTTGAAAGAACAATTGAACGGTATCATCGTTGTTACATCCGTTCTCTGAGCAATAATAGGCCTGAGGAGTTTACACAGGCATGTGTATATACGTACTTTCGGTTTATACAATAAATGAACGTGTTTATATTTATAACTACTCTTACATCAAATTTTCTTGTTACTATATGCATTTCATTATATAGTCCTACATGGTGCAGAATTGGTGCCAGGAGGTGACAAAGCTCAAATCCCAATATGAATCTCTTGTTCGCACTAATAGGATTATTAATAGTTTTCTAAGCCCTTGAAATTATATAGGGATCATCATCACTTTCTGTTGTACACATTATATAAATAGCTGAATAGTTGATGTGTGTTGATATTCATGCTAATTATCAAGGCACTTGCTTGGAGAAAATCTTGGAAAAATGAGCCTGAAGGAACTGCAAGGGTTGGAGAGGCAGCTGGAAGCCGCTCTTACTGCGACTAGAAAACGCAAGGATGTATACATCCATTATCTAAATCGGTCTTGTTTTATATTCAGTCATATGTTATATATAATAAATTCCCCATATATTATGCAGACACAAGTTATGATGGAAGAAATGGAAGATCTTCGGAAAAGGGCAAGTTAAATAATTGTTATATACCAAACTGATACATGTATATACATATATTAACCAATCTATTATTGAAATGGTAGGAGAGGCAGCTCGGAGACATAAACAAACAACTCAAGATTAAGGTTTTCACGCTAGATCTCAAATTATGATTTTTAGAAATAAAACTAACTCGTTTATATTTTTAATAATATTGTTTGTCAATAGTTTGATCAGACCTAAGGCCTTGCTTTCAAATCGTTTCAATATTTATGGCCAAACACGGAAGCATCAGCGGCCGGTGATCCCAACAATTCTGAATTTCCGGTTCAGTCTAGTTCAGTGAATTGCAACACCGAACCTTTTTTTTTTTACAAATAGGGTACGTAACAAAGTACCATTTAACTTCGTTTGTGTGAAAAGGGATAGAAGTTATATATATATTGATTATTAGACTAGTTTGATACTTGGATATGTAAATAGGTTCCAACAACATTACTACGCGCAGGAAACCTCTCTCTAAACACTCTCTCCCAAAGGCGAAACCCTAGCTCCTCCTTCGTTCGGGTGGCCGACGGTGTTGCTCTTTTGCTTTCTTCATTTCTTCGTCTTCGCCTCTCTTTTCCCTCCTCCTCTCTGTTTCCTTTCTCGGAGCTCTGATTCTGGCGCCACCGCGCGGTGTAGATCTGGCGCGTCGGACCTGGATCTCCGGAGAAGCGAGGTGGAGGAGTGGATGTACGGTTCCTTTAGTCAAACGGAGTGGTGGTGGCTCAGATCTGGTTCTGTGGAGAGCTCTGCTTCTTCCTCTGCTTCCTCTGTTTGATTTTCTCGGTAAGGGCGAGATGGTTCGCTTGGCTGAAGGCGTTAGGGTCCCTCAAACGGTGGAGTTGCGGTGTTTCTTCCGACCGTTTTGTTGGTCTCAGGCGCGTCCTTTCTTAGGCCGGTTTGGTTTGTTGCAGGTTCTCTGTAGCAGAGGCGTGTGCGAAAAGGCGAGCAGCTGGGTTTGTCAACCACAACAACCCTTTTCGGGTGGCGGTGCGTGTGGAGTCAACATGACTGTGGACTGGTGTAGGGCTGTCCTGGTCCGCTCCGCTCTGACTTCTGGTGGAGTAGTTGGCTCTGCCTCTTTGGTATAG
CDS Sequence
- >BnaC03G0260200ZS
ATGGGAAGAGGGAGAGTGGAGATGAAGCTAATAGAGAACAAAATCAATAGACAAGTAACCTTCTCAAAAGGAAGAAACGGTTTGATGAAGAACGCTTATGAGCTTTCTGTTCTATGCGATGTTGAAGTTGCTCTCATCGTCTTCTCTAGCTGCGGAAAGCTCTACGAGTTCGGCAGTGTCGGAGTTGAAAGAACAATTGAACGGTATCATCGTTGTTACATCCGTTCTCTGAGCAATAATAGGCCTGAGGAGTTTACACAGGCATGTAATTGGTGCCAGGAGGTGACAAAGCTCAAATCCCAATATGAATCTCTTGTTCGCACTAATAGGATTATTAATAAAAATCTTGGAAAAATGAGCCTGAAGGAACTGCAAGGGTTGGAGAGGCAGCTGGAAGCCGCTCTTACTGCGACTAGAAAACGCAAGGATGTATACATCCATTATCTAAATCGGTCTTATCTGGCGCGTCGGACCTGGATCTCCGGAGAAGCGAGGTGGAGGAGTGGATGTACGGTTCCTTTAGTCAAACGGAGTGGTGGTGGCTCAGATCTGGTTCTGTGGAGAGCTCTGCTTCTTCCTCTGCTTCCTCTGTTTGATTTTCTCGGTAAGGGCGAGATGGTTCGCTTGGCTGAAGGCGTTAGGGTCCCTCAAACGGTGGAGTTGCGGTGTTTCTTCCGACCGTTTTGTTGGTCTCAGGCGCGTCCTTTCTTAGGCCGGTTTGGTTTGTTGCAGGTTCTCTGTAGCAGAGGCGTGTGCGAAAAGGCGAGCAGCTGGGTTTGTCAACCACAACAACCCTTTTCGGGTGGCGGTGCGTGTGGAGTCAACATGACTGTGGACTGGTGTAGGGCTGTCCTGGTCCGCTCCGCTCTGACTTCTGGTGGAGTAGTTGGCTCTGCCTCTTTGGTATAG
Protein Sequence
- >BnaC03G0260200ZS
MGRGRVEMKLIENKINRQVTFSKGRNGLMKNAYELSVLCDVEVALIVFSSCGKLYEFGSVGVERTIERYHRCYIRSLSNNRPEEFTQACNWCQEVTKLKSQYESLVRTNRIINKNLGKMSLKELQGLERQLEAALTATRKRKDVYIHYLNRSYLARRTWISGEARWRSGCTVPLVKRSGGGSDLVLWRALLLPLLPLFDFLGKGEMVRLAEGVRVPQTVELRCFFRPFCWSQARPFLGRFGLLQVLCSRGVCEKASSWVCQPQQPFSGGGACGVNMTVDWCRAVLVRSALTSGGVVGSASLV