Information report for BnaC03G0001300ZS
Gene Details
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Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;late elongated hypocotyl and circadian clock associated-1-like protein 1, LATE ELONGATED HYPOCOTYL 1 gene a
Homologous
- Brassica oleracea: XP_013630031.1, Bo3g001090, XP_013630032.1, XP_013630033.1, XP_013630035.1, XP_013587353.1, XP_013587352.1, XP_013587351.1, XP_013587350.1, Bo5g002760
- Brassica rapa: Bra030496, XP_009111205.1, XP_009119664.1
Gene Resources
- Pfam: PF00249
- UniProt: A0A3P6ABX1
- EMBL: LR031872
- AlphaFoldDB: A0A3P6ABX1
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF176
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- SMR: A0A3P6ABX1
- CDD: cd00167
Sequences
gDNA Sequence
- >BnaC03G0001300ZS
AAACACATTAAAAAAAATGAAGGAAATTAGAGAAAAATGGTTATGGCTGAGATTTGCTTCTGAGTTCTACCTTCCTTCTTCTTCAGCCTTAAACAGTCTTCCTTCTTCTCAATCTATTCTCCAGCTCTAGCTCTGTTGGAAAAAAAGAGTGTTTATTGTTTTCCGGGAACGATGACTTCTCCGGCGAGTTGCCGTGAGATGATCTAGTTTCTATTTTGGATTTGCATACTTTGTTCCTTCATAGTGGCTAAGGGTATGTGTTTTACACTATTTAGCAATATTAGAATCTCTGTTCTGTTGCTGAAGAAGAAATTTAGTAAATTATATTAGCTAGCTGCTCTAAGTTGTTGTTGTTAGGCTGTTAGCATAACTAATCAAACAAATCTTAAGATTAAGCAATCATTATTGATTTTAGGGTGTTTGTGATGCTCTATAAAGGTTTTAGCTGCAATGGATTCGTTTGGGTTTGATTTTTTTTTAGAAAAGAAAAGGGAATTCTTTTGAAGCTACTCTGTGGACTTTTCAGAGATTTCTCACTTTGATTTCTTATTCTCTATCTCTTTTGTTAGTATTGTCCTAGTGTGGATCAAATATTTTCTCATAGTTTCTTTCTCCTTTTGCAGCTAAGCTAGAATCTTTAAGAGGTCTTTTCAATTAGAAGTCACAACGGCTTTGCAATTTGTGGGGCGGGAGGAACTTTGATGTTTGGATTTGAAGCAGCTAGGATCCGGTTATGGATACAAATACATCTGATGGACCTGGTGAAGAATTATTAACTAAGGTAATAAAATGCAAAAGATTGTCCTAGTTTGAGATTTTTCTTCTTTGTTTAGTGTGACGTGAGCGAATATTTGGTTTTGTTGAATGAATAGGCAAGAAAGCCATATACAATAACAAAGCAGCGAGAACGATGGACTGAGGACGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGACGAGCTTGGCAACGTATCCAAGGTCCCAATACATTATTAGCTTCTTGCTGTATGATCTGAACATCAGTCTTCTCTGTTCATTTTCCTTTATTTTTATTTTTTTTATTTTTTTGTACAGAACATATTGGGACAAAGACTGCTGTTCAGATCAGAAGCCCTGCACAAAAGTTCTTCACAAAGGTAAGCCGTTCGGTTCTGTTGGTTGATTGATAGTGAGTCAATATATAGAGATAGATCCCATGAATTTAGTCAATGACTATGTTTAGAGATTGCCTATCTCACTACCTGTCACTTGTGTGTTGTTTTATTTTGCTAAGTAGAGTTGGTTGGTTCCAAGGATAGCAGCAGATGCTTTGTAGAAATTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGTCTACAGTTACATAACTAGCATCGCATTTCGCATGACACACTTTTGTCCCATATTCACCAAACTCCATTAAATAATGAGATTGCATGGACTCTTTTAGCCATTCAAATAGCAAAAACCAAACCTCCTTGGCCCCTATAGGAAAAGGACATGAAGTAAGTGTCTCCTCTACCCACCACGAACACATTCGGGTCAGTATAAGACTCTTTTTTTTTTTAACATCAAGCTCAAGAGTCTAAGGGTTGCATTTACAATCTCCGATTTGGAAAAAACAAAAAAAAAAAGAACTCACAGTTGTGGTTGGACTCTTCAGTTGGAGAAAGAGGCTGAAGCCAAAGGCATTAAAGCTCTGGACATAGAGATTCCACCTCCTCGTCCTGAAAGAAAACCCAATGTTCCTTATCCTCGGAAACCTGGCCCATCTTCCTCTCAAGCGAAACTTGTATCTTCTTCACAATGTAACCAGCCTCAGGTCTTCTTGGATTTGGAAAAAGTGCCCATTTCTGAGGTTTTTTTGGTTCTTCATTCTATCATTTTGTTGTTGTTTCTTGTGACAGACTTGTTATGCTTTTGTTTCTGGTTTAGAAAACATCAACTGGGAAAGAAAATCAAGAAGAGAACTGCTCAGGGGTGAACAAGTATCCCTTACCAAATAATGTAGTAACTCCAGGGAAACTAAAGACATTCATGGAATCTTCTGATCCGTCGTTAAGAAAGGTATAAAGATTGTAGTCCAAGAACATGATGCTGTATTTTGAAGTTCCTCCATAGCAATAAAAGAAAAACTTGGTTCCATTCTGATTATTTTGAGCAGGCAAGTGCCGATAATGAAACAAGCAAGGCTTCAAATGTGGACAACAACATGGTTCATGAGGAGAACAAAGACAGAGATGATGATGGTCTGCACAGCGCAAGGCATCATCCAGCTACTACAACTTCCCATCAAGCGTTTCCAGCATTCCCTTTCCGCTCGTTTCTCCACATGTCTTCTACTTTCTCCAATCTTATCATGTCTACACTCCTACAGAATCCTGCTGTTAATGCTGCAGCCACATTCGCTGCTTCGGCCTGGCCCTTTACTACTAATGCCGGAGCCTCATCAACGCAAATGAGCTCTTCTCCTCCAACTATAGCTGCCATCGTTGCTGCTACAGTAGCTGCCGCAACTGCTTGGTGGGCTTCTCATGGACTTCTTCCTACTCCAGTCCCATTACCAGCCGTCTCAGTTCCAACTCCAGCTGCTATGGATAACGTCCGAAATGATCAACTTGAGAAACAAAGAACGGCCTTTCAAGAACAAAACATGGCTTCAAAATCTCCAGATTCGTCATCCGACGATTCAGAGGAGACTGGAATTACCAAGCTAAAGGCTGACGGTGACATGGAGGAAGTTGTTGCTGCTTTGCAAGATTCAAACGTTTCCCACAAGAAAAATCCAGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGCGGTGACGTGGAAACAGATGCATTGGAGAAAGAAAAAGAGGCAGATGCAAACCAGCCAAGTGTTATTGAGTTAAGCAACCGTCGGAGTAAAATCAGAGACAACAACAACAACCAAACTACTGATTCATGGAAGGAAGTCTCTCAAGGGGTAAAACCAAAAAAAGAAAAAACAATGATTCATTCACTTGCAGCGTTTTGCTTTGGAATTAACACTAACCGTGAAACTCTGGTCTCAGGGTCGTATAGCATTTCAGGCTCTCTTTGCAAGAGAGTGGTTGCCACAAAGCTTTTCACCTCCTCAAGCAGCAGAGGATTTGAATGGAAAACAAATTAGCGACACGTCAATGCCATTGGCTCATAATAACTTGAACAAGATTCAAGATTCTTGTAAAGCAGACCAAGAAAGCGCAGTGAATGAAGAACCGGAGAAGAGCCTTAAAATGAGAGAGACAGGGTTTAAGCCATACAAGAGATGTTCCATGGAAGCGAAAGAGAGCCAAGTTGGAAACGCAAACAATCACAATGATGAAAAGGTCTGCTGCAAGAGGCTTCGTCTGGAAGCAGAAGCTTCAACATAACCAACACAGACTTTGAGGTAATTATATTTGCTTCTTCATTCAATCTTTTATGGAAAGAGACTTTTTTTTCTTCTTCTTCTTTTTAAGATCCATCTGATCTGAACATTTCTTCTGTCATGTCAATTTCTGTACCATATTACTACTCCATCTCCGTGTCTGATGTCTCTGTTTGTGTCCGCCACTTCTGGTCTCTGGTGTGTTATTGTTAAATTTACCATTAAGCAATGGATTTATGTCTATTTTGGATATTTTTGAAATCATAAACACAGTTTTAG
CDS Sequence
- >BnaC03G0001300ZS
ATGGATACAAATACATCTGATGGACCTGGTGAAGAATTATTAACTAAGGCAAGAAAGCCATATACAATAACAAAGCAGCGAGAACGATGGACTGAGGACGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGACGAGCTTGGCAACGTATCCAAGAACATATTGGGACAAAGACTGCTGTTCAGATCAGAAGCCCTGCACAAAAGTTCTTCACAAAGTTGGAGAAAGAGGCTGAAGCCAAAGGCATTAAAGCTCTGGACATAGAGATTCCACCTCCTCGTCCTGAAAGAAAACCCAATGTTCCTTATCCTCGGAAACCTGGCCCATCTTCCTCTCAAGCGAAACTTGTATCTTCTTCACAATGTAACCAGCCTCAGGTCTTCTTGGATTTGGAAAAAGTGCCCATTTCTGAGAAAACATCAACTGGGAAAGAAAATCAAGAAGAGAACTGCTCAGGGGTGAACAAGTATCCCTTACCAAATAATGTAGTAACTCCAGGGAAACTAAAGACATTCATGGAATCTTCTGATCCGTCGTTAAGAAAGGCAAGTGCCGATAATGAAACAAGCAAGGCTTCAAATGTGGACAACAACATGGTTCATGAGGAGAACAAAGACAGAGATGATGATGGTCTGCACAGCGCAAGGCATCATCCAGCTACTACAACTTCCCATCAAGCGTTTCCAGCATTCCCTTTCCGCTCGTTTCTCCACATGTCTTCTACTTTCTCCAATCTTATCATGTCTACACTCCTACAGAATCCTGCTGTTAATGCTGCAGCCACATTCGCTGCTTCGGCCTGGCCCTTTACTACTAATGCCGGAGCCTCATCAACGCAAATGAGCTCTTCTCCTCCAACTATAGCTGCCATCGTTGCTGCTACAGTAGCTGCCGCAACTGCTTGGTGGGCTTCTCATGGACTTCTTCCTACTCCAGTCCCATTACCAGCCGTCTCAGTTCCAACTCCAGCTGCTATGGATAACGTCCGAAATGATCAACTTGAGAAACAAAGAACGGCCTTTCAAGAACAAAACATGGCTTCAAAATCTCCAGATTCGTCATCCGACGATTCAGAGGAGACTGGAATTACCAAGCTAAAGGCTGACGGTGACATGGAGGAAGTTGTTGCTGCTTTGCAAGATTCAAACGTTTCCCACAAGAAAAATCCAGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGCGGTGACGTGGAAACAGATGCATTGGAGAAAGAAAAAGAGGCAGATGCAAACCAGCCAAGTGTTATTGAGTTAAGCAACCGTCGGAGTAAAATCAGAGACAACAACAACAACCAAACTACTGATTCATGGAAGGAAGTCTCTCAAGGGGGTCGTATAGCATTTCAGGCTCTCTTTGCAAGAGAGTGGTTGCCACAAAGCTTTTCACCTCCTCAAGCAGCAGAGGATTTGAATGGAAAACAAATTAGCGACACGTCAATGCCATTGGCTCATAATAACTTGAACAAGATTCAAGATTCTTGTAAAGCAGACCAAGAAAGCGCAGTGAATGAAGAACCGGAGAAGAGCCTTAAAATGAGAGAGACAGGGTTTAAGCCATACAAGAGATGTTCCATGGAAGCGAAAGAGAGCCAAGTTGGAAACGCAAACAATCACAATGATGAAAAGGTCTGCTGCAAGAGGCTTCGTCTGGAAGCAGAAGCTTCAACATAA
Protein Sequence
- >BnaC03G0001300ZS
MDTNTSDGPGEELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIQEHIGTKTAVQIRSPAQKFFTKLEKEAEAKGIKALDIEIPPPRPERKPNVPYPRKPGPSSSQAKLVSSSQCNQPQVFLDLEKVPISEKTSTGKENQEENCSGVNKYPLPNNVVTPGKLKTFMESSDPSLRKASADNETSKASNVDNNMVHEENKDRDDDGLHSARHHPATTTSHQAFPAFPFRSFLHMSSTFSNLIMSTLLQNPAVNAAATFAASAWPFTTNAGASSTQMSSSPPTIAAIVAATVAAATAWWASHGLLPTPVPLPAVSVPTPAAMDNVRNDQLEKQRTAFQEQNMASKSPDSSSDDSEETGITKLKADGDMEEVVAALQDSNVSHKKNPVDRSSCGSNTPSGGDVETDALEKEKEADANQPSVIELSNRRSKIRDNNNNQTTDSWKEVSQGGRIAFQALFAREWLPQSFSPPQAAEDLNGKQISDTSMPLAHNNLNKIQDSCKADQESAVNEEPEKSLKMRETGFKPYKRCSMEAKESQVGNANNHNDEKVCCKRLRLEAEAST