Information report for BnaC02G0442300ZS
Gene Details
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Functional Annotation
- Encodes a nuclear localized member of the MYB family of transcriptional regulators that is involved in negative regulation of flowering. It is expressed in vascular tissues and at low levels in the shoot apex during the transition to flowering. Loss of function mutations are early flowering.EFM is involved in the autonomous, thermosensory and GA pathways and expression is directly regulated by SVP. EFM interacts with JMJD5 to repress FT expression.
Homologous
- Arabidopsis thaliana: AT2G03500.1
- Brassica oleracea: XP_013618499.1, Bo2g137000, XP_013594032.1, Bo7g081380
- Brassica rapa: XP_009129087.1, Bra026548, XP_009152171.1, Bra025115
- Raphanus raphanistrum: RrC5786_p1, RrC12528_p1
Gene Resources
- Pfam: PF00249
- UniProt: A0A816K525
- RefSeq: XP_013675123.1
- EMBL: HG994366
- AlphaFoldDB: A0A816K525
- KEGG: bna:106379796
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017930 , IPR044787
- PANTHER: PTHR31003 , PTHR31003:SF19
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A816K525
- SMR: A0A816K525
Sequences
gDNA Sequence
- >BnaC02G0442300ZS
TGGCTTCCTCATCAGAACTAAGCTTGGATTGCAAGCCACAAAGCTACTCTATGCTTTTGAAATCATTTGGAGATAATTTTCAGAGTGATCAAACCACACAAAAGCTTGAAGATCTTCTTTCTCGGCTCGAACAGGAACGCCTCAAGATCGATGCTTTCAAACGCGAGCTTCCCCTTTGCATGCAGCTCCTTAGCAATGGTACATATATTCACATATAGCATGTACACATATATAGTTTTGTATAATATGAATAAAAAATATTTCATTTGCCACAAAATAAAAAATTACTTAAAACAAGAACAGAAACCTAACGAATAAAATCATTATTTTGTTATATAACGAGAAGAGTTTTTGAATTTCTTTTTACCTTTTCAAAAGATCTTTATTCATTAATTTAGGAATTTAACTCATAAAAATCAGAGCTTGCTTTTGAATTCTTTGAATAACAAAATTTGTTAACCCCTCCCATCACTGAAGTCAACAAATTTAACTAAAGTAATTTTAAAGGTTATAAGGTTCGTGTTAGTTACATCTTTAACTCTAATGTTTCAAATTACTTTCATATCATTTTTCAGCTGTGGAAGTTTATAGACAACAGCTTGAAGCATATAGGGAAAATAGTAATAACAGCAACCAAAGTGTCGTCGCAAGACCGGTTCTTGAAGAGTTCATACCCTTAAGAAACCAACCCGAAAAGGAGAACAACAAAGGGAATAATTGGATGACGACTGCTCAGCTTTGGAGCCAACCTGAAACTAAACCAAAAAACATTGATCCAACTACAGATCAGTCTCCCAAAGACGAGCTTGCTAGTAGTCCAAAACTCGGACATTTTGATGTGAAACAAAGAAATGGTGGTGGGGCTTTTCTACCATTCTCGAAGGAAAAAACTTTGCCTGAATTAGCTTTATCTACGGAGGTCAAAAGAGTCTCCCCAGCCAATGAACATACTAATGACCACGACTGTAATGGTGAGAGCATAATCAACGGTAGCAATAACAACAACAATAATAATTCTTCGACAACAAGTCAAAGTAATAGAAAGGCGCGGCGTTGCTGGTCGCCTGATTTGCACCGGCGATTTGTCCAAGCTCTTCAAATGCTAGGCGGTTCACAAGGTACAAATGAGCACAGTTATTAAATTTATGTTTCAGTTTCATATTGGTTTGCAATGGATAGTCTCACATAATCATCAACTAGTCACAATTATTATTTTTCTAGAACATTTGGGATTCCTCAAACAAATCCGTATACCGTATTGTACAGTGTACATATACCACTCCGAATTTATATTTAGGAGTCTCATTGAATCTAAATTCTGGTTTGGACTTTGTTCTAATATTTTAGTGAACAATATATAGTATAAAATTATGGATAAATTTGCCTTGGTTTAATTTACTGTTGTTCATCTACCAATTAGCAGTCATATTGTTTGAAATAAATTAACAAGTTTAAGTCGGAGTTTCTTATTGCAGTGGCTACACCTAAACAGATAAGGGAACTTATGAAAGTTGATGGTTTGACCAACGATGAAGTCAAAAGTCATCTCCAGGTAACCTACATGACAAGCCACCACAGTATGCTTACTTTGAAAACACTTTTAACTCATAGTTAATTCTTTTATATTACTTTCAAAAACAGAAGTATCGGCTTCACACAAGAAGACCAAGCCCAAGCCCAAGCCCACAAACATCAAGTGGGCAAGGCCCACACTTAGTGGTCCTAGGGGGCATATGGGTCCCACCAGAATACACCACCGCACACGGCGGCACTCCAACTCTCTACCACCACCAAGTCCAAAACCATCAAGGCAACGCGGCGGCGCAGCCTCCACCACACTTTTGCTCCTCTCAAGAGTTTTACACAGCTCGTCCTCCACCACAACAGCTCCACCACCATCACTTTCAAACGTGTAACGGCTCATCCGCGGATGGCTCCGCGTCCACAGATTCAGCTCATCAGTTAACGGACAGTGCCGCCGATGATGGGAAATCGCTAGAGAGTGGTGGTGGCGAAAGAAAAGGATTGGCTGCTCTTAGGGAAGAAAGTGGCAATCAGAGCAATATTAATGGAAGTGAAATAACTCTCAAGTTCTAA
CDS Sequence
- >BnaC02G0442300ZS
ATGGCTTCCTCATCAGAACTAAGCTTGGATTGCAAGCCACAAAGCTACTCTATGCTTTTGAAATCATTTGGAGATAATTTTCAGAGTGATCAAACCACACAAAAGCTTGAAGATCTTCTTTCTCGGCTCGAACAGGAACGCCTCAAGATCGATGCTTTCAAACGCGAGCTTCCCCTTTGCATGCAGCTCCTTAGCAATGCTGTGGAAGTTTATAGACAACAGCTTGAAGCATATAGGGAAAATAGTAATAACAGCAACCAAAGTGTCGTCGCAAGACCGGTTCTTGAAGAGTTCATACCCTTAAGAAACCAACCCGAAAAGGAGAACAACAAAGGGAATAATTGGATGACGACTGCTCAGCTTTGGAGCCAACCTGAAACTAAACCAAAAAACATTGATCCAACTACAGATCAGTCTCCCAAAGACGAGCTTGCTAGTAGTCCAAAACTCGGACATTTTGATGTGAAACAAAGAAATGGTGGTGGGGCTTTTCTACCATTCTCGAAGGAAAAAACTTTGCCTGAATTAGCTTTATCTACGGAGGTCAAAAGAGTCTCCCCAGCCAATGAACATACTAATGACCACGACTGTAATGGTGAGAGCATAATCAACGGTAGCAATAACAACAACAATAATAATTCTTCGACAACAAGTCAAAGTAATAGAAAGGCGCGGCGTTGCTGGTCGCCTGATTTGCACCGGCGATTTGTCCAAGCTCTTCAAATGCTAGGCGGTTCACAAGTGGCTACACCTAAACAGATAAGGGAACTTATGAAAGTTGATGGTTTGACCAACGATGAAGTCAAAAGTCATCTCCAGAAGTATCGGCTTCACACAAGAAGACCAAGCCCAAGCCCAAGCCCACAAACATCAAGTGGGCAAGGCCCACACTTAGTGGTCCTAGGGGGCATATGGGTCCCACCAGAATACACCACCGCACACGGCGGCACTCCAACTCTCTACCACCACCAAGTCCAAAACCATCAAGGCAACGCGGCGGCGCAGCCTCCACCACACTTTTGCTCCTCTCAAGAGTTTTACACAGCTCGTCCTCCACCACAACAGCTCCACCACCATCACTTTCAAACGTGTAACGGCTCATCCGCGGATGGCTCCGCGTCCACAGATTCAGCTCATCAGTTAACGGACAGTGCCGCCGATGATGGGAAATCGCTAGAGAGTGGTGGTGGCGAAAGAAAAGGATTGGCTGCTCTTAGGGAAGAAAGTGGCAATCAGAGCAATATTAATGGAAGTGAAATAACTCTCAAGTTCTAA
Protein Sequence
- >BnaC02G0442300ZS
MASSSELSLDCKPQSYSMLLKSFGDNFQSDQTTQKLEDLLSRLEQERLKIDAFKRELPLCMQLLSNAVEVYRQQLEAYRENSNNSNQSVVARPVLEEFIPLRNQPEKENNKGNNWMTTAQLWSQPETKPKNIDPTTDQSPKDELASSPKLGHFDVKQRNGGGAFLPFSKEKTLPELALSTEVKRVSPANEHTNDHDCNGESIINGSNNNNNNNSSTTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPSPQTSSGQGPHLVVLGGIWVPPEYTTAHGGTPTLYHHQVQNHQGNAAAQPPPHFCSSQEFYTARPPPQQLHHHHFQTCNGSSADGSASTDSAHQLTDSAADDGKSLESGGGERKGLAALREESGNQSNINGSEITLKF