Information report for BnaC02G0145400ZS
Gene Details
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Functional Annotation
- Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization.
Homologous
- Brassica oleracea: Bo2g032410, Bo3g019340
- Brassica rapa: Bra020445, Bra006824
- Citrullus lanatus: Cla97C08G154630
- Vitis vinifera: VIT_18s0001g07650
Gene Resources
- Pfam: PF00041 PF07227
- UniProt: A0A078HWS0
- EMBL: HG994366 , LK032519
- AlphaFoldDB: A0A078HWS0
- OMA: REVNEPE
- InterPro: IPR032881 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF8
- STRING: 3708.A0A078HWS0
Sequences
gDNA Sequence
- >BnaC02G0145400ZS
AACGAACCAAATCCTCATTTTATTTACTTTTATTTTTGTTTTTTTTGTTTTCTGGTATTTATTTTTTTATTCACAAAAATTCTCAATGTTTTGTTCTTCCTAGAGCTTAACGACCGTGTCCTCCTCGGATCCCTTGTCTTATACATACACATTAAGACAAGGAGAGCTTCATGGGGTTTTCCTTTTGGTTGTTTAAACTTTTAACTTTGAAAAAAAAATTGGAAAATAAAATCTGAGCTTTATCGATCTCTTATGTTCTTGCGGATCGTGAGTACATGTTTTACATGCTTCTTTTCCATAGAATCTTTTTAACTTTTGTCTTCGTGTTTGTCTGAAATCTGATCTGCAGCTCTCAAAGAATTGGCGTTTTGATAGTACTGTGGGTCCAGAAGACATAGATCCTTCTTCATTTCAAGGTACGTATATCTTCTTCTTGTCGACGTGAATGTCTTTTTGTCTTCTCATTGTTCTAGTTCGACGCGTTTATATGCTTTTAGGTCATTAACGCTACGTCGTTTTAATTCATCGGAACTGTTGAAACATGATCGTATACGCTTATTGATGCGCCATTGTGAATATATTGGTTGTTCTTGACAAATTGTGAATACATTTTACCCAAAAATGTCATAATAATTTTTTTTTTGTTTATTCTTATTCATTTATACTTGGCAATACGATTGCTTTTGGCTTTTGCAGGTGTTACGTGCACTGACTTTCCCAAAAAGAAAGGCTTGAGTGTAAGTGAGAGGAGGGAACTGATCCACGCATTGTCCAAGCAGCCAGAAGAAGCATCAGAGCTTTTAAACTCATGGAGCCGAGATGAGATAATGAAGATCATATGTGCAGAGATGGGGAAAGAGAGGAAGTACACTGGTCTAGCCAAACCAAAACTCATAGAAACCCTACTCAAACTTGTGTCTCGTCCTCTCGGAGAAACCTCTCGTCCTGACCGTAAAAACTCGAAAAAGAAACGGAAGACGACCAGTTACATCATTTGCTGCGAGAATGTAGCTTGTAGAGCTGCGCTTGGAACCGAGGATACCTTATGCAGGAAGTGTTCTTGCTGCGTTTGTCAGAACTATGATGAAGATAAAGATCCGAGTCTATGGATTACTTGTGAGGCTTGTGGACTGTCTTGTCATTTGGAATGCGCTTTGGAGCAAAAGAGGTATGGGATTGGGTGTGATGATGATGAAGTAGGAAGAGCGCTTGATGGTAGGTTTTATTGCGTGTTTTGCGGCAAAGATAATGACTTGCTCGGGTAAGAATATATGGATATACAATGAACATAGATTGTTTGGAGGATGTGTAATGTAATATTATGTGTGTGTACTTACAGATGCTGGAGGGAACAAGTGAAGGTGGCGAAAGAGACTCAACGTGTGGATGTTCTTTGCTACCGTGTTTCTTTAGGACAGAAGCTGCTAAGAGGTACAGGGAAGTATCGATATCTATTGGAACTCATGGACGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTATCGGGTTGGGCGATGAATATGGCTCGCGGTATCGTCCAAAGACTTTCTTCAGGATCACAAGTTCAGAAGCTGTGTTCTCTGGCAATGGAAGCTCTGGACAAAATGGTCTCACCACCATCAGAATCTGTTTCAGGGCAAGGTTAGTTTTCTCTTCACACATTGTAATGTTTTGGAGTCCGAAGATGTTGACTTTAGTTCTCGTTAGGTGACAAGCTGAGCGTGGGAGTGGAAGAGATTCAAGCAAGATCAGTCACTGTGATATTAGACTCGGAGGAGCCGTCTTCTTCACAAAACCAGACCACTGGTGTGAAGGATGATGAAGATGAAGCTGGGAACATTCAAAGCCTATTGATTAACTCTAGCAGTGGTCTTTGCAGTAATCCATCTTTACCGGAAGATGAATTTAACAATGTCCTTATCAGCTGCTGCAAAGAAAATGGTGACAATGACAACATTGAAGTAGAATCTGAGCTTGAAGACGAGAGGCTCATAACAAGGGAAGTTAACGAGCCAGAGGGAAGAGACTTGCTTGTTGTAACACCCTGCCGAAGAGATGCTTATAAGGGCAAGCAAGAAGGGAACAAAAGATCCAAATCAAGAACAGCAACCGTGAACGAGAAACCTGAGACCAATGTAGCAAATGGAGTTGGAGAAGATGAAGACTTGGTTCACGTCGTCAAGACCATCAGATGCTTAGAGAAAGAAGGGCATATAGACAAGAGTTTCCGGAAAAGGTTCTTGACATGGTATAGCTTAAGAGCAACTCATCGTGAAGTTAGAGTTGTGAAGCTTTTTATCGAGACATTCATGGATGATCTGCCCTCTTTGGGACAACAGCTTGTGCATACATTCACAGAATGCATGTTCAACAAAAGATCATCAGCAAGTGGTGTTGTACCTGCTGGAATCTGCCTCAAGCTCTGGCATTAAATCTTTTGAAATCTCTCTCAATTTTCTTAATATTCTAAAAACCATAACGATGTCTTATGTAACTTTGCTTCCTTCTAATGTATAGTGCAA
CDS Sequence
- >BnaC02G0145400ZS
ATGAAGATCATATGTGCAGAGATGGGGAAAGAGAGGAAGTACACTGGTCTAGCCAAACCAAAACTCATAGAAACCCTACTCAAACTTGTGTCTCGTCCTCTCGGAGAAACCTCTCGTCCTGACCGTAAAAACTCGAAAAAGAAACGGAAGACGACCAGTTACATCATTTGCTGCGAGAATGTAGCTTGTAGAGCTGCGCTTGGAACCGAGGATACCTTATGCAGGAAGTGTTCTTGCTGCGTTTGTCAGAACTATGATGAAGATAAAGATCCGAGTCTATGGATTACTTGTGAGGCTTGTGGACTGTCTTGTCATTTGGAATGCGCTTTGGAGCAAAAGAGGTATGGGATTGGGTGTGATGATGATGAAGTAGGAAGAGCGCTTGATGGTAGGTTTTATTGCGTGTTTTGCGGCAAAGATAATGACTTGCTCGGATGCTGGAGGGAACAAGTGAAGGTGGCGAAAGAGACTCAACGTGTGGATGTTCTTTGCTACCGTGTTTCTTTAGGACAGAAGCTGCTAAGAGGTACAGGGAAGTATCGATATCTATTGGAACTCATGGACGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTATCGGGTTGGGCGATGAATATGGCTCGCGGTATCGTCCAAAGACTTTCTTCAGGATCACAAGTTCAGAAGCTGTGTTCTCTGGCAATGGAAGCTCTGGACAAAATGGTCTCACCACCATCAGAATCTGTTTCAGGGCAAGGTGACAAGCTGAGCGTGGGAGTGGAAGAGATTCAAGCAAGATCAGTCACTGTGATATTAGACTCGGAGGAGCCGTCTTCTTCACAAAACCAGACCACTGGTGTGAAGGATGATGAAGATGAAGCTGGGAACATTCAAAGCCTATTGATTAACTCTAGCAGTGGTCTTTGCAGTAATCCATCTTTACCGGAAGATGAATTTAACAATGTCCTTATCAGCTGCTGCAAAGAAAATGGTGACAATGACAACATTGAAGTAGAATCTGAGCTTGAAGACGAGAGGCTCATAACAAGGGAAGTTAACGAGCCAGAGGGAAGAGACTTGCTTGTTGTAACACCCTGCCGAAGAGATGCTTATAAGGGCAAGCAAGAAGGGAACAAAAGATCCAAATCAAGAACAGCAACCGTGAACGAGAAACCTGAGACCAATGTAGCAAATGGAGTTGGAGAAGATGAAGACTTGGTTCACGTCGTCAAGACCATCAGATGCTTAGAGAAAGAAGGGCATATAGACAAGAGTTTCCGGAAAAGGTTCTTGACATGGTATAGCTTAAGAGCAACTCATCGTGAAGTTAGAGTTGTGAAGCTTTTTATCGAGACATTCATGGATGATCTGCCCTCTTTGGGACAACAGCTTGTGCATACATTCACAGAATGCATGTTCAACAAAAGATCATCAGCAAGTGGTGTTGTACCTGCTGGAATCTGCCTCAAGCTCTGGCATTAA
Protein Sequence
- >BnaC02G0145400ZS
MKIICAEMGKERKYTGLAKPKLIETLLKLVSRPLGETSRPDRKNSKKKRKTTSYIICCENVACRAALGTEDTLCRKCSCCVCQNYDEDKDPSLWITCEACGLSCHLECALEQKRYGIGCDDDEVGRALDGRFYCVFCGKDNDLLGCWREQVKVAKETQRVDVLCYRVSLGQKLLRGTGKYRYLLELMDEAVKKLEGDVGPLSGWAMNMARGIVQRLSSGSQVQKLCSLAMEALDKMVSPPSESVSGQGDKLSVGVEEIQARSVTVILDSEEPSSSQNQTTGVKDDEDEAGNIQSLLINSSSGLCSNPSLPEDEFNNVLISCCKENGDNDNIEVESELEDERLITREVNEPEGRDLLVVTPCRRDAYKGKQEGNKRSKSRTATVNEKPETNVANGVGEDEDLVHVVKTIRCLEKEGHIDKSFRKRFLTWYSLRATHREVRVVKLFIETFMDDLPSLGQQLVHTFTECMFNKRSSASGVVPAGICLKLWH