Information report for BnaC02G0062900ZS
Gene Details
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Functional Annotation
- Encodes a low molecular weight nuclear WDR protein which displays functional homology to the Swd2 protein, an essential subunit of the yeast histone methylation COMPASS complex. APRF1 acts upstream of FLC and promotes flowering under long day conditions.
Homologous
- Brassica oleracea: Bo2g011990
- Brassica rapa: Bra023473
- Citrullus lanatus: Cla97C10G196710
- Cucumis melo: MELO3C009987
- Cucumis sativus: CsGy3G037710
- Glycine max: Glyma.19G063300
- Gossypium hirsutum: Gohir.A10G102600, Gohir.D10G086800
- Juglans regia: Jr01_04920
- Manihot esculenta: MANES_17G112900
- Medicago truncatula: Medtr6g007797
- Populus trichocarpa: POPTR_017G071900v3
- Rosa chinensis: RchiOBHm_Chr2g0172941
- Vitis vinifera: VIT_14s0066g00720
Gene Resources
- Pfam: PF00400
Sequences
gDNA Sequence
- >BnaC02G0062900ZS
CACTGAGGAGGTTGTTGGTCGGCAGAATGATCGGCGGGGGCTGGTGCCTCGCCGTCGTTGGGGATCCAGAAAGTGAGAACCGTAGAGGCAGCAACGAACATTGCTCTACGCGGTGCCCATTTCAGACACGACACTACTCCTATGTTGTTCTCCCACCTCGCCACCTGCTTTTTTAGACTAAGTTTAGATACTGTGACAAGGATAATGGCAAAAAGGAATACAATAGCTACAACTTTCTGAATCATTCATCTTCTTTTAAGTGAACCAGTGTCCATAACTGGTGTATGTACAATATTAATGGTGTTTTGACTGTTCCGTATTTACCTCAGATGGGTTCTCGATGTTCCACGCATGTAAGGTTCCATCTCCTGAACCTGTATCCACACAAAAATAACACTAACTGTGAGTCATGATAAAGATAATCTAGCATTACCTGGACAAGTGTATGACCATATTACCTGACAAAACATACTTGCCATCTGGTGTGAAGGTGGCTTCTAGGGATGCACCCTGTGAAGGCTCCAAACTAAAACCACATTTCTACAAAACAAAGAAAAAATGAACATAATGTTCTGTCTTCTTCAAATGAAAGATACAAAATGTAGTTACCTTCTCTCCATGATATGCGTCAAGAACGTAGATATTGTTATTTGTGGTAGTGAGAAGCATTGATTTTCCATCGTTGCTGAATTTAATATCATTGACCTCAGCAGTATCCCCACCCACCAGAAATGTGTCAAAGGGACCCTACAGAAGAGATCAACTGGGCTTAGTTAGAACTACAAGAGAATTCGTTTGCAAGGTTGTGTGAATCATAGCAAGTAGCTAACCTTGTCATAGCATCTGGAATCAAATAACTTAACAGCACCTCCTTCCATTGCAATTGCAAACACCAGGCCTTGTTGGTCATAAGCTACAGCAGGTCTCCCACGTAGGTGTAGAATTCCCTATAGAGTAAAAGGGTAAGCATAAATCATGAAACTATATGCATTCACAGAGAGGCTATATGTAAATGGTTCCAGCAATTTATCAAGTTAAATTAACAAAAAGAAAGAGCCATTTCCCGGTTGAAATTCTAACACATTCAGACTTGTTCCATAGTGGAAGTTCTCAGGGACTTTGTGAAAGTGGAAACAAACCTGGCAGGCATTAACACGAAGATCCCAGAGTCTGACACTTCTGTCTAAAGAACCAGACATGAAGCTATCATTAATAGGCGACATACAAAGCGATACAACCCTGAAAGCAGAAGAACATTTTTTTCATCAATGTACATAATAATAATACTAGTGCATAAGCATATAACACCAATATATCCAATCTCAGAGGTTATAAAAGACCTGTCTTTGTGGCCTTTAAAGTAGCGAAGGATCCGGTTATCATACATTGAGAGATATCTCAGAGATTCTGGTACATGAAAAAAACATATCCAACTAAATGTGTTAACACCAATCTCAAGCAAGGTAAGTGAGAAGGACGAGTCATCATTACCTCCAGTGGACTCAGATTGTAAAGAGAAGAGCAAATAAAAGAGCTGGGATGATGTGTAAAGCATACACGATCAGTCCCATGTTTCTTGTGATATGTAACCTTCACCTGTCTACGCTTCAACAAAAAAAAAATGGATAATTAAATTAAAAAAAAAAAACTAAAACCTTAATTAATCTATTTATCCCAAAATATTCTTCTCAATTCCCTAAGGCAATTAGATTCTCTAGCTAAGGAGAGAAACTGACTTAGCGTTGGCGATATCGAAGAGACGAAGCGAATCGTCCTCGCTCGACGTCACCAATAGATCATCAGTCCTATGGAACCCCACCGAACGTATCTTCCCTCCCTGCAAATTCAACGATGAGATCAAATCTCGAGAATTGGATTTTTGGCAAAGTTCATCGAGAAAAGTAGTTGCGTACGAAGTCGGAGAAGACTGCTCCGATGGCCATACTGCGTACCAGTCCGTCGTCTAGCTCCGTCAACGACAT
CDS Sequence
- >BnaC02G0062900ZS
ATGTCGTTGACGGAGCTAGACGACGGACTGGTACGCAGTATGGCCATCGGAGCAGTCTTCTCCGACTTCGGAGGGAAGATACGTTCGGTGGGGTTCCATAGGACTGATGATCTATTGGTGACGTCGAGCGAGGACGATTCGCTTCGTCTCTTCGATATCGCCAACGCTAAACAGGTGAAGGTTACATATCACAAGAAACATGGGACTGATCGTGTATGCTTTACACATCATCCCAGCTCTTTTATTTGCTCTTCTCTTTACAATCTGAAATCTCTGAGATATCTCTCAATGTATGATAACCGGATCCTTCGCTACTTTAAAGGCCACAAAGACAGGGTTGTATCGCTTTGTATGTCGCCTATTAATGATAGCTTCATGTCTGGTTCTTTAGACAGAAGTGTCAGACTCTGGGATCTTCGTGTTAATGCCTGCCAGGGAATTCTACACCTACGTGGGAGACCTGCTGTAGCTTATGACCAACAAGGCCTGGTGTTTGCAATTGCAATGGAAGGAGGTGCTGTTAAGTTATTTGATTCCAGATGCTATGACAAGGGTCCCTTTGACACATTTCTGGTGGGTGGGGATACTGCTGAGGTCAATGATATTAAATTCAGCAACGATGGAAAATCAATGCTTCTCACTACCACAAATAACAATATCTACGTTCTTGACGCATATCATGGAGAGAAGAAATGTGGTTTTAGTTTGGAGCCTTCACAGGGTGCATCCCTAGAAGCCACCTTCACACCAGATGGCAAGTATGTTTTGTCAGGTTCAGGAGATGGAACCTTACATGCGTGGAACATCGAGAACCCATCTGAGGTGGCGAGGTGGGAGAACAACATAGGAGTAGTGTCGTGTCTGAAATGGGCACCGCGTAGAGCAATGTTCGTTGCTGCCTCTACGGTTCTCACTTTCTGGATCCCCAACGACGGCGAGGCACCAGCCCCCGCCGATCATTCTGCCGACCAACAACCTCCTCAGTGA
Protein Sequence
- >BnaC02G0062900ZS
MSLTELDDGLVRSMAIGAVFSDFGGKIRSVGFHRTDDLLVTSSEDDSLRLFDIANAKQVKVTYHKKHGTDRVCFTHHPSSFICSSLYNLKSLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYHGEKKCGFSLEPSQGASLEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAASTVLTFWIPNDGEAPAPADHSADQQPPQ