Information report for BnaC02G0027500ZS
Gene Details
|
|
Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Brassica oleracea: Bo2g008600, Bo3g004300
- Brassica rapa: Bra028701, Bra005933
- Citrullus lanatus: Cla97C06G128240
- Glycine max: Glyma.06G162500, Glyma.04G203000
- Juglans regia: Jr09_00040, Jr02_00090
- Manihot esculenta: MANES_06G128300
- Vitis vinifera: VIT_00s0283g00020
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: A0A0D3AI27
- RefSeq: XP_013620574.1
- AlphaFoldDB: A0A0D3AI27
- KEGG: boe:106327094
- OMA: QSPKDKF
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437 , IPR047395
- PANTHER: PTHR12302 , PTHR12302:SF9
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- OrthoDB: A0A0D3AI27
- SMR: A0A0D3AI27
- CDD: cd20443
- eggNOG: KOG2039
- STRING: 109376.A0A0D3AI27
- HOGENOM: CLU_005966_2_0_1
Sequences
gDNA Sequence
- >BnaC02G0027500ZS
AAAAAAAAAAAAACTGTTGAAGCATAGTTCGAACTTCCTCTTATTTCCAGTCCTACATAGGAAATTTTCGTTTTTGCTCAAAAAAAAAAAACATAGGAAATTTTCGTTAAAACTCAAAAAGTATAACCATAGTCCAAAACGTTACAAAAAAAAAAGTCTGATGACATGTCTTTTAAAACCTTAAGAGAAACCGACCAACCACTTGTCTCCCTCCTACCTCATGGTCCCTTTGAACCAGCATATCGATTACCATTATTACCTGCGACCACCAGCAGGCTTCCTAGCCGGAGCAGTGTCCTCATCATCTGATTCCACGTCACCGTACTGCCAGATCCCAGTCCTAGCCTTGCGAGCTTCCTCCTGGAACTTCTCCAAAGCATCAAGAACAGCTTGCTTGTCCTTGTGCTCAAATCTCCTACGTTTCTCCATTTTCGCTATTCCTTCCTGTGTTCATCATCATCAACCATCATCAGAAACACAGATTCTTGGAAACGTTCTATAGAGACAAAGGTGTGAGAGAGGAAACCTACCTGAAGCATTGCAGCGTTGACAGAGATCTCTTCATCAGCAGCAATGAGAGTGACAGCAAGTTCAGTTCCAGTGCCTTGGCCTTTGACTTTACCACCAGATGTGTCTCTTTCCTCTATCACTGCCTTGAACTCTTTACCGCTTCCAAGCGTCACGGTATGCAGATACTCTCCAGCTTCAGGACCAAAGTCTTCCTCCAGGCTTGGAACCTTTATGTAAGCAAGTCTGCATAGCTGAGCAAGCCCTGGTGCTGAGGAGACAGAAGGATCTATTGGTCGGATTGCGCTGTAAGGGACTAGCTCTTGGTTTCCATAATCAATGTAGAACACTTCAAGCTTCTCATCAGGGGACTGAATAGCTTCTCGTGGTGCACTCACAATCTGGAGACAAAGGTGTCAGATTAAATGAATAAGCAGCACAGTAACTAAGAAAGTGGACTAGACATACTAGGCCTGCGGGTTTGGTTAGGTTATTCTGTTCGGGTAGTTTGGTTCAACATAAATCTTATGGAATTAACCCGAAATAAAATCCGGTTCGGTTCAGTAATTGGTTAGTTCGATTTTTGAAAAATTCTACCGAAGTGTTTTATTTTGGTTTAATTTTGTTAAAATTTTGGATAAATTTAGTTAAATTCGGTTATTTTAATTCAAAATCTGGTTAGTTCGGTTTGGGTTTTTGGTATGGTTTGGGTATATTTTTTTATTAAGAAGAAACCGAAATAACCGTTTACCGAACCAAAAGAACTTTTTTAGAAAACCTACCAAACTAACCGAAATTTCGGTTCGGTTAAAAATCTCAGGCCTAAGACTTACCATTGCACGGTTCCAGGAGTTGTCAAGGCTAAACTGTGCAAGCACAATGTCACCTCTCTTGGGGTTAAAGGATCCAATGATTGGAGCATCTTTAACACTCAGAGAAGCAAGCTGGTTCTGAATAGAAGATATCCTCTGATCTCCAACAGATTGAACATAGAACCGACCACCTCCAAGTACTTCTGTAACAGCAACCTTCAAAGTCTCCTTCTGCCTAGTCTCCACAGTTGTACTCCCGTTTGAGACTTCTTGTCCTTCAACATAATTTTCCCAAATCTGCAAAAAGATAAAAAAAAAAACGGTTTAGCAAACATAAATCTATTACCAAAAGACATATATTATACTAATGCCACCTTCAGTTTCTGATTCTTAGCAGTTCTCTCTGCCTGCTCAAGAATATGCGCTTCAACAATCCTGTCTGCACCAAAACTAGTCTGCATCTTGGCTAAACCAGCTTCAAGCAGAACCGTCGCCACGTTTGTCCTCCCCTCCCACATTGATCCTAGGAAAGTACCGGTTCTATCCACCGTTTCAACTTCAATCTATGTAAAGTTTATAACAAACTATTAGCAAAAGAATAGAGAAAAATTAAATGTAAGTTTAGATTTGTTTAGCTTACCTCAACATCCCTCTGCATGATCCTACGTCTCATCACAGAGATAGCTTCATCCGAGAAAGGCTCTCCACGTCCAGGGCATCTAACACCAGAGAACGCAAACGCAATGCTACACGTCAGCTTTGGAATATAAAGCTTACACCGATGTCCACTCAGTACATATTCCACAACAGCTGGTATCCTCCTGATCCTCTGAAGCGACGGCAAGAAATCTTTAGCCTTCTTAGCCGCGGCCACGGTTAGGTCGGTGATGTGCATGGCCGGAGACTCTTTAGCAGAATGTATTCCTTTCTTGCCAGACAAAGCGCGAGATTCAGCAGCGAGAAGAGCATCGTAATGGTTTGACCTCTCTTCAAAATCTCTGTGTCTGACCACGTTTCCAAAACCACGGGAGAGGAGAAGCTCAGCGATGTTGACTCCAGCTGGCTGAGTGCCGGAGATGGCTGATGCAGTAGTTACTTCCTCGGTGTCGCCTTTGGAGGGAGATGGAATGAACACTGAGCCGAAGTCCATTATCCTATCTGCAGTTGTGGTAGCACCTTCTCCTGGTGTGACTTTCCTTGAGTATTCCATTTGAACAATGACCTGTGTAAAGGCAAATGAATACCATATGATATAATGCATCAAGACTAAATAACCGATCTTAACCAAAATTCTGAACCGGACTAACCGAACTAACTAAAATTCGAACTGAAATAACTAAGCTTAACCATTTTTTTGAATTTTAAGTTTTTAACCAAGTTAAAACCAAAATTTAACTGAATGCAAAACACTTCGGCAAGTTTGATAGAAATTTCTTAAACCGACCTAACTGAAAACCGAACCGAACTAACCAAAATCCGAAACGAAATGACCGAACTAAACCAAAAAAAATTCAAATTTTAACCAATTTAAAACCGAAATATAACCGAAAACCGATTTTTTTGTGTGTACAATTCGGCTGAACCAAACCGAACTAACCGAACCAAAAAACCCCCGAAATTAACCAAAACCGCATGCTAATTAAGAGAATTGGAGAAAAATGCTAATTAAGAGAATTGGAGAAAAATGAATTAAGCTTTTCTAGTATTACTCTCAAGTTGTAATTGATAAATTAAACTTTCTATTCATATTCAGAAAGTACCTAGTTATCTAAAATGAATCTTTATTATATGATAAATTAAACTTTCTATTCATATTCAGAAAGTAAGCTTAACCAAATTTTTTTTTGAATTTTAACCAAGTTAAACCAAAATTTAACTGAATGCAAAAACTTTGGTTAAGTTTGATAGAAATGTCTTAAACCGACCTAACGGAAAAAATCGGAATTTTAACCAGTTTAAAAACGAAATTTAACCAAATGTGACAACTTCAGTTAAGTTTGATAGAAACTTTTGAAACCGATCTAACCGAAAACCAAACCGTACAATATGGCCGAACCGAACTAACCGACCCAAGAACCCCGAACTAACCAAAACCGCATGCCTAAAATTTAAGAGAATTGGAGAAAAATGAATTAAGCTTTAATAGTATTACTCTTCAAGTTGTAATTGATAAATTAAACTTTCTATTCATAGTCAGAAAGGACCTAGGTATCTAAAATGAATCTTTATTATATGGTTATCTAAACCAAGATAACAAACCGAATGCATATAGTCTAACACAGTACCTGTTTGCCAATAAGCCGTTGCCTCAGAAACTCTCTTGCTTCCCTAGCATAAGGAGCTGGCTTCTCTTCTCTACGTGGGTTGCCCATTTTAGGACATCTGATACTCGAAAGATTGACACGTCTCTCTGCAGCCGGGCTCCCGTATGGGATAGCATCATCAGCAACTACAACACAGTCCCCACTCACCACTTCCACTACCTAAAAACATAGATATAAAACCAATGACTCAAGAAAATCAAAGGAGAAAGACAGTGTTTAACCAAGAGAGATGTTTACCTTTCCAGTAAAGTTCTGGTCATGAAGTGCCTTAGAGTTTGTAGCTGGAGGAACATAGCTTGCCCACATCTTCACACGATCTTTCTTGCATTGGAGTTCAGCAGCTTTCAGCTTCCTCTTGGCTTCTTCCTCCATCATGTTAGCACTCCATTCAACGTATTTAGCAAGACCCTAAGTAAAAGTCATTAAGTTTGTTAGCAACATATAATAATAACATTGCTTAATATTATAAGCACATACATTTTCAACGAGCTCCAGACCCAAGTCTTTAACTGCTTCTCCATCAGAGTAATGGACTGAACCAATCAGGTTGTTGAACTTGTCAACACCTTCAAGAACAACCCGAACCTGCAAGATTCAGCTTCAAAAATTAAGATCAATCCAAGATGAAAAAAATAAAGATAAACATGAAGGAAACTTACATCTCTGCTAAGAACACGATGCTCGGTGAAGTACTTAGCCTCAGCTGCAAAAGGATCAGCAGAAACCTCAACAGATGATGCTGCAGAGGCAGCAAGTCTCTGAGCTGACGTCAGAGGACCTCTTGACTCGCCAGAAGCATCTCCATTAGACTCAGCTGGAACCGTCTCAACAACGTTTCCGTTTGTGTTTCTTCTTCCCATTGATGGAGACTAACATTAAAAGAAAAATATCTGACTTTGTTGCATGATTTTCATCTTAAATGTTTAAAAATGTCAAGTTAAATCACTCACCTGGATTCCAGCAACAAAGACTTGCACAAACTGGAACTCTGGAAGGAGATAAACACGAATAGTACTACCATCTCGGACTTGCTCCACAACACCTTCCATAGGTTTGCCTTTATTAGCAGCTAAAAGCCCCATTGCATCAAAGCCTCCAGCATCTCCAATGGCAGAGGGAGGAAGGTCTCTGATAGATGCCTCAGCAGCACCAGGGACCTGGTAAAAATCGTTTATTATTAATTAAAAAAAACTAAAAGACTTTGGAGAATGTAAGTAAGGAAGAGAGAGAAAGACCAACCTTGCTAAAACAACCAAAGCCTTCTTGCTTAGCCTGCTCTTGGAGCTGTAGCAGCTCTACAATGTAAGGACTAACTTTGCCCTGACTCTGCTGACCTTGCTCCCTAACCTTAGCCCAACCATTTTGAACAACAACCTTTGCTAGATTCTGGTTACCGAGGAAGACAGAACCAAACTCTCTTCCAGCAATAGCTTCCACTTTGTAATCCACTTTGAAAGCAACTTCCTGTTCAAAGAACAAAAAAAAGTAAGATGAGAAAACTATTGTCAATTATAATACTTAGATTGTTTACAATTGTCACTGTTCTAAAAATCGGTCTAGGCGGCAAATCAGACCTAAACGAAACAATTTTTTAATCAATAATCCCCCATAAAGGGCCTAATGGCTGCCTATCGATTTCTTGAACATTGACAAATTAGTAGAAGGATTTAGACTTTTGGCACCTTTCCAATTTAGGAAACTCTTTGCTTTCCCATGCAAAAGTAAGATGAGAAAAATATTTTCAATCATAACACCTATATTTGTGTACAATTGGCAGTGTTCTAAAAATCGGTCTAGGCAGCAAATCAGACTTAAAATTTTATAATCAATCATCCCCTATAAAGAGCCTAATTGCCGCCTATCAATTTCTTGAACATTGACAATTAGTAAAGAATTTAGAGACTTTGGCACCTTTCCAATGCAGAGTTTCCTAAGAAACTCCTTGCTTTCCCATGCAAAAGGCTCATCTTTACCTCCCCTGCGAGCCTACAATAAGAAAAAAATCCAAAATAATTAAATAATAATAATAATAGTAATAATAGTACTCCCTCCGTTTCATATCAAGTGTTGTTTTAGAGAATTTTTTTCGTTACAAAATAAGTATCATTTACGATTTTCAATGCAAAATTTATTAATTTTATGCAAAATTTATTAATTTTATGCAAAATTTATTTTTCTATTGGTTAAAATATGGTTAGGTGTATAGGTATAGTGTTTTTTTTATAGGAAATGTACAAAATTAATTGTTTTCTTAATCCATGTGCCGAAACATAAAAGGACTCTTATAATGAAAGAGAGGGAGTAATAGCAATGGAGGCATAAAAGAGTTGACTTTTGGAATTTAGGTGAAGCTACCATCTTAGGTGCCATGAGAGAAGACAGAGTGATGGTCTTTTCCGGTGGAGCTCCAGGTCTGTTGTGGGTCAAAGCGGTGATCACTAAACAGTCTCCGGAGGTTACAGCCTTCACTCTTCCTTTGAGCCATTGGTTCTCAGTCGCTGTTGCCATGCTGACCTGCACCAAAGACAAGACCCATATCAGAATTAAAACATTTAAAGACAAATTAATAATAATTATTCAATGCTGCTGCTTTTTTTCAAAAAAATGGGTGCATTGGTGGTAACTACTATATTATCAAGATTCATTTTGGCCCCATCAGATTAATGCACAGCTACATGCGTCTGATTTAAAAAAGGCTATGAATCATGAAAATGTAACATTTGTCTCGATCTGCACTAATCAAACCAAACAAGAACGTTTCTAACCAGCTAGATGATTGATCAGATCGTATAACAAATCAAAAACGACAAATTGAGTCAACAAGAAGATAGATCTACATGAATTCCTTAGAAGCACATACCTTGATTAACCAAATGAGAGAAACACAGACCAGATCTGAAGATCCTTCTCTAAACACAAATGAGAAGAAGAAGAAAAAGACAGGAGCTATGAGTTTAGGACACAAAGCTAACGGCGGATCTCGAGATTAGAGAGGTGAGAGCTCAGGGGATCTGT
CDS Sequence
- >BnaC02G0027500ZS
ATGGCAACAGCGACTGAGAACCAATGGCTCAAAGGAAGAGTGAAGGCTGTAACCTCCGGAGACTGTTTAGTGATCACCGCTTTGACCCACAACAGACCTGGAGCTCCACCGGAAAAGACCATCACTCTGTCTTCTCTCATGGCACCTAAGATGGCTCGCAGGGGAGGTAAAGATGAGCCTTTTGCATGGGAAAGCAAGGAGTTTCTTAGGAAACTCTGCATTGGAAAGGAAGTTGCTTTCAAAGTGGATTACAAAGTGGAAGCTATTGCTGGAAGAGAGTTTGGTTCTGTCTTCCTCGGTAACCAGAATCTAGCAAAGGTTGTTGTTCAAAATGGTTGGGCTAAGGTTAGGGAGCAAGGTCAGCAGAGTCAGGGCAAAGTTAGTCCTTACATTGTAGAGCTGCTACAGCTCCAAGAGCAGGCTAAGCAAGAAGGCTTTGGTTGTTTTAGCAAGGTCCCTGGTGCTGCTGAGGCATCTATCAGAGACCTTCCTCCCTCTGCCATTGGAGATGCTGGAGGCTTTGATGCAATGGGGCTTTTAGCTGCTAATAAAGGCAAACCTATGGAAGGTGTTGTGGAGCAAGTCCGAGATGGTAGTACTATTCGTGTTTATCTCCTTCCAGAGTTCCAGTTTGTGCAAGTCTTTGTTGCTGGAATCCAGTCTCCATCAATGGGAAGAAGAAACACAAACGGAAACGTTGTTGAGACGGTTCCAGCTGAGTCTAATGGAGATGCTTCTGGCGAGTCAAGAGGTCCTCTGACGTCAGCTCAGAGACTTGCTGCCTCTGCAGCATCATCTGTTGAGGTTTCTGCTGATCCTTTTGCAGCTGAGGCTAAGTACTTCACCGAGCATCGTGTTCTTAGCAGAGATGTTCGGGTTGTTCTTGAAGGTGTTGACAAGTTCAACAACCTGATTGGTTCAGTCCATTACTCTGATGGAGAAGCAGTTAAAGACTTGGGTCTGGAGCTCGTTGAAAATGGTCTTGCTAAATACGTTGAATGGAGTGCTAACATGATGGAGGAAGAAGCCAAGAGGAAGCTGAAAGCTGCTGAACTCCAATGCAAGAAAGATCGTGTGAAGATGTGGGCAAGCTATGTTCCTCCAGCTACAAACTCTAAGGCACTTCATGACCAGAACTTTACTGGAAAGGTAGTGGAAGTGGTGAGTGGGGACTGTGTTGTAGTTGCTGATGATGCTATCCCATACGGGAGCCCGGCTGCAGAGAGACGTGTCAATCTTTCGAGTATCAGATGTCCTAAAATGGGCAACCCACGTAGAGAAGAGAAGCCAGCTCCTTATGCTAGGGAAGCAAGAGAGTTTCTGAGGCAACGGCTTATTGGCAAACAGGTCATTGTTCAAATGGAATACTCAAGGAAAGTCACACCAGGAGAAGGTGCTACCACAACTGCAGATAGGATAATGGACTTCGGCTCAGTGTTCATTCCATCTCCCTCCAAAGGCGACACCGAGGAAGTAACTACTGCATCAGCCATCTCCGGCACTCAGCCAGCTGGAGTCAACATCGCTGAGCTTCTCCTCTCCCGTGGTTTTGGAAACGTGGTCAGACACAGAGATTTTGAAGAGAGGTCAAACCATTACGATGCTCTTCTCGCTGCTGAATCTCGCGCTTTGTCTGGCAAGAAAGGAATACATTCTGCTAAAGAGTCTCCGGCCATGCACATCACCGACCTAACCGTGGCCGCGGCTAAGAAGGCTAAAGATTTCTTGCCGTCGCTTCAGAGGATCAGGAGGATACCAGCTGTTGTGGAATATGTACTGAGTGGACATCGGTGTAAGCTTTATATTCCAAAGCTGACGTGTAGCATTGCGTTTGCGTTCTCTGGTGTTAGATGCCCTGGACGTGGAGAGCCTTTCTCGGATGAAGCTATCTCTGTGATGAGACGTAGGATCATGCAGAGGGATGTTGAGATTGAAGTTGAAACGGTGGATAGAACCGGTACTTTCCTAGGATCAATGTGGGAGGGGAGGACAAACGTGGCGACGGTTCTGCTTGAAGCTGGTTTAGCCAAGATGCAGACTAGTTTTGGTGCAGACAGGATTGTTGAAGCGCATATTCTTGAGCAGGCAGAGAGAACTGCTAAGAATCAGAAACTGAAGATTTGGGAAAATTATGTTGAAGGACAAGAAGTCTCAAACGGGAGTACAACTGTGGAGACTAGGCAGAAGGAGACTTTGAAGGTTGCTGTTACAGAAGTACTTGGAGGTGGTCGGTTCTATGTTCAATCTGTTGGAGATCAGAGGATATCTTCTATTCAGAACCAGCTTGCTTCTCTGAGTGTTAAAGATGCTCCAATCATTGGATCCTTTAACCCCAAGAGAGGTGACATTGTGCTTGCACAGTTTAGCCTTGACAACTCCTGGAACCGTGCAATGATTGTGAGTGCACCACGAGAAGCTATTCAGTCCCCTGATGAGAAGCTTGAAGTGTTCTACATTGATTATGGAAACCAAGAGCTAGTCCCTTACAGCGCAATCCGACCAATAGATCCTTCTGTCTCCTCAGCACCAGGGCTTGCTCAGCTATGCAGACTTGCTTACATAAAGGTTCCAAGCCTGGAGGAAGACTTTGGTCCTGAAGCTGGAGAGTATCTGCATACCGTGACGCTTGGAAGCGGTAAAGAGTTCAAGGCAGTGATAGAGGAAAGAGACACATCTGGTGGTAAAGTCAAAGGCCAAGGCACTGGAACTGAACTTGCTGTCACTCTCATTGCTGCTGATGAAGAGATCTCTGTCAACGCTGCAATGCTTCAGGAAGGAATAGCGAAAATGGAGAAACGTAGGAGATTTGAGCACAAGGACAAGCAAGCTGTTCTTGATGCTTTGGAGAAGTTCCAGGAGGAAGCTCGCAAGGCTAGGACTGGGATCTGGCAGTACGGTGACGTGGAATCAGATGATGAGGACACTGCTCCGGCTAGGAAGCCTGCTGGTGGTCGCAGGTAA
Protein Sequence
- >BnaC02G0027500ZS
MATATENQWLKGRVKAVTSGDCLVITALTHNRPGAPPEKTITLSSLMAPKMARRGGKDEPFAWESKEFLRKLCIGKEVAFKVDYKVEAIAGREFGSVFLGNQNLAKVVVQNGWAKVREQGQQSQGKVSPYIVELLQLQEQAKQEGFGCFSKVPGAAEASIRDLPPSAIGDAGGFDAMGLLAANKGKPMEGVVEQVRDGSTIRVYLLPEFQFVQVFVAGIQSPSMGRRNTNGNVVETVPAESNGDASGESRGPLTSAQRLAASAASSVEVSADPFAAEAKYFTEHRVLSRDVRVVLEGVDKFNNLIGSVHYSDGEAVKDLGLELVENGLAKYVEWSANMMEEEAKRKLKAAELQCKKDRVKMWASYVPPATNSKALHDQNFTGKVVEVVSGDCVVVADDAIPYGSPAAERRVNLSSIRCPKMGNPRREEKPAPYAREAREFLRQRLIGKQVIVQMEYSRKVTPGEGATTTADRIMDFGSVFIPSPSKGDTEEVTTASAISGTQPAGVNIAELLLSRGFGNVVRHRDFEERSNHYDALLAAESRALSGKKGIHSAKESPAMHITDLTVAAAKKAKDFLPSLQRIRRIPAVVEYVLSGHRCKLYIPKLTCSIAFAFSGVRCPGRGEPFSDEAISVMRRRIMQRDVEIEVETVDRTGTFLGSMWEGRTNVATVLLEAGLAKMQTSFGADRIVEAHILEQAERTAKNQKLKIWENYVEGQEVSNGSTTVETRQKETLKVAVTEVLGGGRFYVQSVGDQRISSIQNQLASLSVKDAPIIGSFNPKRGDIVLAQFSLDNSWNRAMIVSAPREAIQSPDEKLEVFYIDYGNQELVPYSAIRPIDPSVSSAPGLAQLCRLAYIKVPSLEEDFGPEAGEYLHTVTLGSGKEFKAVIEERDTSGGKVKGQGTGTELAVTLIAADEEISVNAAMLQEGIAKMEKRRRFEHKDKQAVLDALEKFQEEARKARTGIWQYGDVESDDEDTAPARKPAGGRR