Information report for BnaC01G0190000ZS
Gene Details
|
|
Functional Annotation
- Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.
Homologous
- Brassica oleracea: Bo1g040150, Bo7g110300, Bo2g048220, Bo9g103610
- Brassica rapa: Bra013890, Bra019165, Bra022565, Bra028277
- Medicago truncatula: Medtr6g464620
Gene Resources
- Pfam: PF14226
- UniProt: A0A816RGR6
- EMBL: HG994365
- AlphaFoldDB: A0A816RGR6
- OMA: SDACNKH
- InterPro: IPR005123 , IPR026992 , IPR027443 , IPR044861 , IPR050231
- PANTHER: PTHR47990
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- SMR: A0A816RGR6
Sequences
gDNA Sequence
- >BnaC01G0190000ZS
TATTGGATGGGTTTGTTGGTGAGCCAATCTGTGAAAGCCTGGAGAGTGTGCATGTCTGCTCTATAATGTTTCTGAGTGAACTCAAGCAACATAGACCAAGTGAAGTCAGGGTATCTCCTTGGTGTGTTGCTGTCCAAAAGCTCTCTTGGTGGCTTCACTACTCTGTCCTTTTTTGGACACAAGAAGAACGCAAGTGATTTCCTCTCGCTCTTGCTGTTCACCACCGCCCGGTGCAAGCAGCTTTTGTATCTATTGTTTGATAGAGCCTACAAAAACCAGATTAAGCCCGGTTTAATATATTTCTAAGTTCTAACCAAGAAAAGGGAATTTTCTTTAGATGTTTACCATGAAAGTATCACCGATATTGACCACAAAGGCCTTGGGGTTAGGACTGATGGAGCGCCACTGATTATCGACAAAGACTTGAAGGCCATGAACATGGTCTTGGTGAAGGATGGTAAGAGAAGTAGGATCACAATGAGGTCCTGTTCCAAATGTAAGATCTGGTTTTTGACATGGAGGGTAGTAATTTAGTCTCATTATGGAATCATTTTCTTCAAAAAAAGATTTGAAGTAGTCTCCGGATACGCCTAAACTTATCCCTAGAAGCTCCATGATCTTCAGTGACAGAGAACTCATTGCTTCACAGTACTCTTGATACACTTTCCTGCAAACCACAAACCAACAGTGACATAAGTCTTCTAATGTTACAATACAGTGGTTGTAACAGTCCGGTATAGAATAAACCGGTTCTTGCTCTGTTTGTTTTTTCTTCTTTTAACTTTCTTTTAAAGGACAAAAAGCAAGAGGAGGAAAGGACAAAAGACATGTTAAAGATTTGATTTTTTTTTTTGTTTTTTTTTTAATTTCTTATAGTTTATTGCTCTGTTTTAACGTTTACCCAAATGGCTCAAACTCATGTCCCAACGCATCGCAGAAGTAATCTTGAACGTTTTTTGGGCGGCTCTTGTCGTCGCAAAACTGGAAAGAAAGGGTTTCCTTCCACGGAAGCTTGGTGGAGAAACGGCCAGTGAAACTGCTTGCGTAGCCACAACTCTGGCCTGCTTTTCTCTGAATCCTCTGTTTCTCAGAGAGAGGCATGTCGAAAAAGCGGGACATGTATTCATGAGCGTCAGATATAAGCTGCTCGCTGATGCCGTGATTGACCACGAGGAAGAAACCGTGCTTGTTACAGGCGTCGGAGATGAGCCTGGAAGCATCTAACGTGGAGTGGCTATGGGCGAGGAAGTTTTGGAGATCGATGAGGGGAACGTCAAGCTCGGGAGCTTCGAGGCAAGGCTTCTCATCGTCAGGCCAAATGAACTGGCTTGGGATAGTGGCTTGGAGGTTAAGCATTGAAGGATTGAAGACAAGTGGCGTCACAAGGTCTAGTTTTGGTGTGTGTTCTTCCTCAGGGGATGTTATTACGCAACTCGCCGCCAT
CDS Sequence
- >BnaC01G0190000ZS
ATGGCGGCGAGTTGCGTAATAACATCCCCTGAGGAAGAACACACACCAAAACTAGACCTTGTGACGCCACTTGTCTTCAATCCTTCAATGCTTAACCTCCAAGCCACTATCCCAAGCCAGTTCATTTGGCCTGACGATGAGAAGCCTTGCCTCGAAGCTCCCGAGCTTGACGTTCCCCTCATCGATCTCCAAAACTTCCTCGCCCATAGCCACTCCACGTTAGATGCTTCCAGGCTCATCTCCGACGCCTGTAACAAGCACGGTTTCTTCCTCGTGGTCAATCACGGCATCAGCGAGCAGCTTATATCTGACGCTCATGAATACATGTCCCGCTTTTTCGACATGCCTCTCTCTGAGAAACAGAGGATTCAGAGAAAAGCAGGCCAGAGTTGTGGCTACGCAAGCAGTTTCACTGGCCGTTTCTCCACCAAGCTTCCGTGGAAGGAAACCCTTTCTTTCCAGTTTTGCGACGACAAGAGCCGCCCAAAAAACGTTCAAGATTACTTCTGCGATGCGTTGGGACATGAGTTTGAGCCATTTGGGAAAGTGTATCAAGAGTACTGTGAAGCAATGAGTTCTCTGTCACTGAAGATCATGGAGCTTCTAGGGATAAGTTTAGGCGTATCCGGAGACTACTTCAAATCTTTTTTTGAAGAAAATGATTCCATAATGAGACTAAATTACTACCCTCCATGTCAAAAACCAGATCTTACATTTGGAACAGGACCTCATTGTGATCCTACTTCTCTTACCATCCTTCACCAAGACCATGTTCATGGCCTTCAAGTCTTTGTCGATAATCAGTGGCGCTCCATCAGTCCTAACCCCAAGGCCTTTGTGGTCAATATCGGTGATACTTTCATGGCTCTATCAAACAATAGATACAAAAGCTGCTTGCACCGGGCGGTGGTGAACAGCAAGAGCGAGAGGAAATCACTTGCGTTCTTCTTGTGTCCAAAAAAGGACAGAGTAGTGAAGCCACCAAGAGAGCTTTTGGACAGCAACACACCAAGGAGATACCCTGACTTCACTTGGTCTATGTTGCTTGAGTTCACTCAGAAACATTATAGAGCAGACATGCACACTCTCCAGGCTTTCACAGATTGGCTCACCAACAAACCCATCCAATAA
Protein Sequence
- >BnaC01G0190000ZS
MAASCVITSPEEEHTPKLDLVTPLVFNPSMLNLQATIPSQFIWPDDEKPCLEAPELDVPLIDLQNFLAHSHSTLDASRLISDACNKHGFFLVVNHGISEQLISDAHEYMSRFFDMPLSEKQRIQRKAGQSCGYASSFTGRFSTKLPWKETLSFQFCDDKSRPKNVQDYFCDALGHEFEPFGKVYQEYCEAMSSLSLKIMELLGISLGVSGDYFKSFFEENDSIMRLNYYPPCQKPDLTFGTGPHCDPTSLTILHQDHVHGLQVFVDNQWRSISPNPKAFVVNIGDTFMALSNNRYKSCLHRAVVNSKSERKSLAFFLCPKKDRVVKPPRELLDSNTPRRYPDFTWSMLLEFTQKHYRADMHTLQAFTDWLTNKPIQ