Information report for BnaA10G0008600ZS
Gene Details
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Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;LHY1/CCA1-like protein, LATE ELONGATED HYPOCOTYL 1 gene b
Homologous
- Arabidopsis thaliana: AT1G01060.4, AT1G01060.3, AT1G01060.2, AT1G01060.1
- Brassica oleracea: XP_013587353.1, XP_013587352.1, XP_013587351.1, XP_013587350.1, Bo5g002760
- Brassica rapa: XP_009119664.1, Bra033291
Gene Resources
- Pfam: PF00249
- UniProt: A0A817B5I5
- RefSeq: XP_013666351.1
- EMBL: HG994364
- AlphaFoldDB: A0A817B5I5
- KEGG: bna:106370900
- OMA: NVNTQFH
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF151
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A817B5I5
- SMR: A0A817B5I5
- CDD: cd00167
Sequences
gDNA Sequence
- >BnaA10G0008600ZS
AAGGAAAAAAATGTTGTGGCTGAGATTGATTCTGGCTTTCTTCTTCTTACAGTCTTCTTCACCCTAAAACAGTCTTCCTTCCTTTCTTCCTTCTTCACTTATCTTCTTCTCTGTCTCTTCATCAGTTCCGCTAAAACATAAAAAAGATAGTTTTTTTTCCTTCCGATTTGATTGTTTCTCCGGCGAATTCTCCGGTGAGATGATCTAGTTTTTATTTACGGATTGTTCCTCAATGATGGCTACTCTCAAGGGTATGTGTAATTTACATTATCAGCAATTAATAAGGTTGCATCTGAAAATCACTGTTGTGTAGCTCAGAAATGGATTATTAAAGAGCTCTAAGTTGTTTTAGATTAGATTCATTACTGATTGTGATGGTTTTTTTAAAAAGGTTTTGGATGCAATGGATTCATTTGGGTGAGACTTTTGAGAAGTAAAAGGGGATTCTTTTGAGTTCTGCTACTCTGTTTCACACGGTGGACTTTTCAAAGATTTCTCCTTTCATTTCTAAATCTCTCTTTCTCTATCTTTTACTAATATGATCTTTGGTGGTGTGGATAAAATATTTCTCATAGTCTCTTTCTCTTTTTTTGCAGTTGCTTTAGAATCTTAAAGAGGTTACTTTTCAGTTAGAATCAATCACAACAGGCTTTTGCTATTTGGAGGGGATCAAAGATGGTTTCTTTGTTACACTAGAGAGGGATTTGAAGCAGCGGGGAAAGCTGCTAAGATCCGGTTCTGATGGATACTAATACATCCGGAGATGAGTTATTAACCAAGGTAATGATTAATGAATGGAAAAGATTGTCCAGGTTTGAGATTTTTTGGATTCTTCTTTGTTGTTGTGTGAGTGAAGATTTGGTTTGTTTTTTTGTGAATGAATAGGCAAGAAAGCCGTATACTATTACAAAGCAGCGGGAACGATGGACAGAGGATGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGAAGGGCCTGGCAACGTATAGAAGGTCTACAATTGTTATCTATTTTATTAATTAACACAGAGAGGGAGTTTTTGTTTTCTTTTGTTTATGAGTTTTTCATTCTGGGAGTTCTCTCTCTCTTTTTGTGTGTGTGTGCAGAACATATTGGGACAAAGACTGCTGTTCAGATCAGAAGTCATGCACAAAAGTTCTTCACAAAGGTAAGCTGTTCCTTTTGAATCTTAAGTAAAGATACAACTGGTTTAGTAGTGAGATAGTGACGATCAATGAACTTAATTGGAACCGGTTTTGTGTGGTTCTGTTTTTCTCATTGCTTCAACTATAGTTTGTTGGATAGCAGCAGGCTTTTACCTTGTTCATTTGCTCTGCAACTGGAAACCGTACCCTTAGATTATAGCTTCATTATCTGGACCATAACACTGGTCTATAGTAACAAAAAAATAGCATTGCATATGCATAACATAAGTGTCTCACATACTCAGTAAAGTCGGATGAAATAATGAGATTGCATGGACTCTTTTAGCCAATTCAAATGGAAAAACCAAACCTCCCTGGCCGGTTGGCCCTATAGGACAGGAAATGAAGTAACTGTCTTGTCTACCCCCGTACAATTCGGGTCAGTATAAAGACTCTTTTTAACCTCAAGAGTCTCAGGGTTGCATTTACCATCTCCAGGTATGAACAAAAAAAACACTAACAGTTATGGTTCAACTCTTTCAGCTGGAGAAAGAGGCAGAAGCTAAAGGCATTCCAGTTTGTCAAGCTCTCAACATAGAGATCCCACCTCCTCGTCCTAAAAGGAAACCCAATACTCCTTATCCTCGTAAACCTGGCAATAATGGCCCATCAGCAAAACTTGTAGCCTCAGCCTCTTCTTCACAATGTAACCAGGCTTTCTTGGATTTGGAAAAAGTGCCCATCTCTGAGGTTTATTCTTCTCTCTTTTTCTCTTCTATCATTTTGGCTTTTCTTCTTGTGATAGTTTTGTTATGTTTTTTTTTTATTGTTTAGGAAACATCAAATGGGAAAGAAAATCAAGATGATAACTGCTCAGGGGTTTCTACTGTAAACAAGTGTCCCTTACCAAAGAAAGTAACTCAACCGTCTCTAAGAAAGGTATACAACTTGTAGTCCAAGAACATGATGAGTTTGCTGTATTATAAGCTCAATAGCATGTAAGAATAAAACTTGTTCCGTTCTGATTTTGAGCAGGAAAGTGCCGATAATGGAACAAGTAAGAAGGCGTCAAATGTGAACACTCAGTTTCATCCCCCAGGTATGGTCTCTCAAGACTTGATGTTTTGTCCTATGGGAGATCGTGTTCACGGGCACGTGAATCTTCCACCTACCACAACATCATCTGCTACTACTACAACTACTTCTCAACAGGCGTTTCCTGCGTGCCCTTCCCAGGATTCGTTTCTCCACTTCTCCTCTACTTTCCCCAATCTCATTATCTCAAGCCTCCTACAGAATCCTGCAGCTCATGCTGCAGCCACCTTCGCTGCTTCAGTCTGGCCCTATTCCAACGTCGGGAACTCGGGAGGAGATTCATCAACAACGCAAATGAGCTCCTCTCCTCCAAATATAGCTGCCATCGCTGCTGCTACGGTAGCTGCCGCAACTGCTTGGTGGGCTTCTCATGGACTTATTCCTGTTTGTGCTCCTCTTGCTCCAGTCACTTGCCTTCCATTACCAACCTTTGCAGTTCCAACTCAGGCTACGGATAAGATGGATACCGTTGAAAATGATCAAGAACCGCTGGAGAAACAAAACACAGCTCTGCAAGATCAAAAGTTGGCTTCAAAATCTCCATCTTCATCATCCGATGATTCAGAAGAGACTGGAGTAACCAAGCTAAACGCTGCTGGCTCAAAGACAAATGGTGACAAGGAGGAAGTTGTTGCTGCTGCTTTGCATGATCCAAACGCGTCCCCAAAGAAAAAGCTGGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGAAGTGACGCGGAAACAGATGCCTTAGATAAGATGGAGAAAGATAACGAGGATGTGAAGGAGGCAGATCCAAACCAGCCAAGTGTTATTGAGTTGAGCAACCGTCGGAGTAAAATCAGAGACAACAACAACAACAACAACCAAACTACTGATTCGTGGAAAGAAGTCTCCCAAGGGGTAAGCAAAAACAAAGAACAACAAATGATTCATTTATTTGCAGAGAGTTTTTCTTTTGAAATTAACACTAAAATCTTTGTTTCAGGGTCGTAAAGCGTTTCAGGCTCTCTTTGCAAGACAGAGATTGCCTCAGAGCTTTTCACCTCCTCAAGTGGCTGCAGAGAATGTGAATGTGAATGGAAAGCAAAGTGATACGTCAATGCCGATGGCTCCTGATCTCAACAAGGTTCAAGACTCTTGTGATGCGGACCAAGAGAGTGGAGTAGTAATGATAGGTGATGGAACGGGGAAGAGCCTTAAAACGAGACAGTCAGGGTTTAAGCCATACAAGAGATGTTCAATGGAGGCGAAAGAGAGCCAAGATGGGAACGCAAACAATGAAAGCGATGAAAAAGTCTGCAAGAGGATTCGATTGGAAGGAGAAGCTTCAACATAACAACAACAACAAGAACTTTGAGGTAAAATAAAAATCTGTTTTTACCAAATATCATTAAATCAAGTGTTAGTAATGAAAGAGACTTTTTTTTTCTTAATCTTTTATAGATCCATCTGAACGGTTCTTTGTTCATGTCAATCCATGTACCATATTACTACTACTCCATCTACATGTCTTGTCCCTTGTCTCTGTTGTGTTTGTGTCTGCTACTTCTGGTCTACATGTCTGCTGCTGTTACTGTTACTGTTACTGTTACTGTTAATTAACCGCTAAGCAATGGATCTATGTTTTGTGTCTGTTTGTCTTTTTTGAACTCTGGATATTTTATGAGATCATAAATAGTTTAGAATGATAA
CDS Sequence
- >BnaA10G0008600ZS
ATGGATACTAATACATCCGGAGATGAGTTATTAACCAAGGCAAGAAAGCCGTATACTATTACAAAGCAGCGGGAACGATGGACAGAGGATGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGAAGGGCCTGGCAACGTATAGAAGAACATATTGGGACAAAGACTGCTGTTCAGATCAGAAGTCATGCACAAAAGTTCTTCACAAAGCTGGAGAAAGAGGCAGAAGCTAAAGGCATTCCAGTTTGTCAAGCTCTCAACATAGAGATCCCACCTCCTCGTCCTAAAAGGAAACCCAATACTCCTTATCCTCGTAAACCTGGCAATAATGGCCCATCAGCAAAACTTGTAGCCTCAGCCTCTTCTTCACAATGTAACCAGGCTTTCTTGGATTTGGAAAAAGTGCCCATCTCTGAGGAAACATCAAATGGGAAAGAAAATCAAGATGATAACTGCTCAGGGGTTTCTACTGTAAACAAGTGTCCCTTACCAAAGAAAGTAACTCAACCGTCTCTAAGAAAGGAAAGTGCCGATAATGGAACAAGTAAGAAGGCGTCAAATGTGAACACTCAGTTTCATCCCCCAGGTATGGTCTCTCAAGACTTGATGTTTTGTCCTATGGGAGATCGTGTTCACGGGCACGTGAATCTTCCACCTACCACAACATCATCTGCTACTACTACAACTACTTCTCAACAGGCGTTTCCTGCGTGCCCTTCCCAGGATTCGTTTCTCCACTTCTCCTCTACTTTCCCCAATCTCATTATCTCAAGCCTCCTACAGAATCCTGCAGCTCATGCTGCAGCCACCTTCGCTGCTTCAGTCTGGCCCTATTCCAACGTCGGGAACTCGGGAGGAGATTCATCAACAACGCAAATGAGCTCCTCTCCTCCAAATATAGCTGCCATCGCTGCTGCTACGGTAGCTGCCGCAACTGCTTGGTGGGCTTCTCATGGACTTATTCCTGTTTGTGCTCCTCTTGCTCCAGTCACTTGCCTTCCATTACCAACCTTTGCAGTTCCAACTCAGGCTACGGATAAGATGGATACCGTTGAAAATGATCAAGAACCGCTGGAGAAACAAAACACAGCTCTGCAAGATCAAAAGTTGGCTTCAAAATCTCCATCTTCATCATCCGATGATTCAGAAGAGACTGGAGTAACCAAGCTAAACGCTGCTGGCTCAAAGACAAATGGTGACAAGGAGGAAGTTGTTGCTGCTGCTTTGCATGATCCAAACGCGTCCCCAAAGAAAAAGCTGGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGAAGTGACGCGGAAACAGATGCCTTAGATAAGATGGAGAAAGATAACGAGGATGTGAAGGAGGCAGATCCAAACCAGCCAAGTGTTATTGAGTTGAGCAACCGTCGGAGTAAAATCAGAGACAACAACAACAACAACAACCAAACTACTGATTCGTGGAAAGAAGTCTCCCAAGGGGGTCGTAAAGCGTTTCAGGCTCTCTTTGCAAGACAGAGATTGCCTCAGAGCTTTTCACCTCCTCAAGTGGCTGCAGAGAATGTGAATGTGAATGGAAAGCAAAGTGATACGTCAATGCCGATGGCTCCTGATCTCAACAAGGTTCAAGACTCTTGTGATGCGGACCAAGAGAGTGGAGTAGTAATGATAGGTGATGGAACGGGGAAGAGCCTTAAAACGAGACAGTCAGGGTTTAAGCCATACAAGAGATGTTCAATGGAGGCGAAAGAGAGCCAAGATGGGAACGCAAACAATGAAAGCGATGAAAAAGTCTGCAAGAGGATTCGATTGGAAGGAGAAGCTTCAACATAA
Protein Sequence
- >BnaA10G0008600ZS
MDTNTSGDELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEAKGIPVCQALNIEIPPPRPKRKPNTPYPRKPGNNGPSAKLVASASSSQCNQAFLDLEKVPISEETSNGKENQDDNCSGVSTVNKCPLPKKVTQPSLRKESADNGTSKKASNVNTQFHPPGMVSQDLMFCPMGDRVHGHVNLPPTTTSSATTTTTSQQAFPACPSQDSFLHFSSTFPNLIISSLLQNPAAHAAATFAASVWPYSNVGNSGGDSSTTQMSSSPPNIAAIAAATVAAATAWWASHGLIPVCAPLAPVTCLPLPTFAVPTQATDKMDTVENDQEPLEKQNTALQDQKLASKSPSSSSDDSEETGVTKLNAAGSKTNGDKEEVVAAALHDPNASPKKKLVDRSSCGSNTPSGSDAETDALDKMEKDNEDVKEADPNQPSVIELSNRRSKIRDNNNNNNQTTDSWKEVSQGGRKAFQALFARQRLPQSFSPPQVAAENVNVNGKQSDTSMPMAPDLNKVQDSCDADQESGVVMIGDGTGKSLKTRQSGFKPYKRCSMEAKESQDGNANNESDEKVCKRIRLEGEAST