Information report for BnaA09G0206600ZS
Gene Details
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Functional Annotation
- Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.
Homologous
- Brassica oleracea: Bo9g063040, Bo2g129860, Bo7g074140
- Brassica rapa: Bra017569, Bra022023, Bra025031
- Glycine max: Glyma.13G218500, Glyma.15G093600
- Gossypium hirsutum: Gohir.A06G137800, Gohir.D06G143000
- Manihot esculenta: MANES_15G122100
- Populus trichocarpa: POPTR_011G084400v3
- Prunus persica: PRUPE_4G081400
Gene Resources
- Pfam: PF00888 PF10557
- UniProt: A0A078HBM7
- EMBL: HG994363 , LK032347
- AlphaFoldDB: A0A078HBM7
- OMA: FWPSYIP
- InterPro: IPR001373 , IPR016157 , IPR016158 , IPR016159 , IPR019559 , IPR036317 , IPR036388 , IPR036390 , IPR045093
- PANTHER: PTHR11932
- SUPFAM: SSF46785 , SSF74788 , SSF75632
- PROSITE: PS01256 , PS50069
- Gene3D: 1.10.10.10 , 1.20.1310.10 , 3.30.230.130
- OrthoDB: A0A078HBM7
- STRING: 3708.A0A078HBM7
Sequences
gDNA Sequence
- >BnaA09G0206600ZS
CAGGTACTCGGAACGTCATACTGCTGCATGTATTTCATTCCTTCAGCAGCATAAAATTCAGAAGTGCATTCAAGGAAAGGTTTCTCAAAGCCTTCCGTATATATTCCCAGTGCAGTAAACATCTTTAAAAGATGGCTTAGGAGTGTCCTATTAACAGCTTCGGCTAACCTGCACGATCAATGACATGCACGAAAGGTCAATAGATTCCGATGAAAACATTATCAAATATATAAATGACTAACAATACTGCAGCAGCAGGCCTTATGAAAACAAATTCCCAATGTGATAAATAAACCTTGTTTTACATATTAATAGACTGGAATAGTTACAGGATTACCTTTCCTTTTCGATGATTCTTAAGAGAGCAGTAACAGTCCTCTGCTCAACGTCGGGGGAGAGAGAAAGATGCTTGCGAAAAAGCTGAAGGCCCATCTCCCACAAAGAACGTACATTGGGGTTCTGTATAACATACTTCCTATCCAAAGACAAGGCTATACTCCGGATCATGAGCATCTGGTCACAGAAATCTTGCCAGCATTTCTCAACGAGGGACAAGAAAACAGAGAGATCGGTGTCTTGGCCAACTAAAGAATGTAAAGCGGCAGAGATGTGCTCTTCACACTCCTTCTGCATCCGTTCGTAAAGCTTTCCTTCCAGCTTATGCAAGCAAAGGTCATCAACAGCCTGAATGAAACAATCAACATTGTTTCATTTTCACAAACAAGAAGTAAGAAACCAAAGAAAGAAAGAAAAAGATGGAACCTGGTAAAGCCTCTCGAGGTCGAAAGAAAAGGGCTTTTTGAGGAATATAGCTCTGATAGCTGACTGCAGATTAGCCCAGGTAGTGTCTTCAAAGTTTGTTGGTAGAGTTGGTTTGGCTTCACATATATATTACAAAGTCAGAAACTTCCAAATGATCCATATCATAGATTATGCATAACATAGATAACGGATCTTGCAATACATAAACCCTAACCACTCCTTAACAAATCAAAATCAGGCAATCAAGCTCTCGATTCAACAGTGAATCCCGATCCAATTCAATCGCAAAAACCCTAAAATTGAGAAGCGTTACGCTACATAATCAATCGTTCCGTGCAGAGAGTCATTTTCAATCAATCGAGAGCTTCGATTTTTACACACTACGCAAACAAAATCCTAAGAAACATCAGATTTTAGGATCGGAATGAACCTTTGTTGAGCTTGATGACGAGCTTCTTAGTGGGGTGGGGGAGAGTAGCCTTCTTCCGGGAGAGATTGGCTGCGGCGGAGGGGGTTGGATCTTCGTCCTCCATGGGGAAGGGAGAGTGGAGGCCGTTTTTGGACTTTTTCATGGGAGGAGGGGAAGAGTAAGAAGAGTCGGTGGTGGAGGCAGAAGAAGCGGCTGCGGGGCAAGTTGAGCGTTTGTTTGGAAGAGACAT
CDS Sequence
- >BnaA09G0206600ZS
ATGTCTCTTCCAAACAAACGCTCAACTTGCCCCGCAGCCGCTTCTTCTGCCTCCACCACCGACTCTTCTTACTCTTCCCCTCCTCCCATGAAAAAGTCCAAAAACGGCCTCCACTCTCCCTTCCCCATGGAGGACGAAGATCCAACCCCCTCCGCCGCAGCCAATCTCTCCCGGAAGAAGGCTACTCTCCCCCACCCCACTAAGAAGCTCGTCATCAAGCTCAACAAAGCCAAACCAACTCTACCAACAAACTTTGAAGACACTACCTGGGCTAATCTGCAGTCAGCTATCAGAGCTATATTCCTCAAAAAGCCCTTTTCTTTCGACCTCGAGAGGCTTTACCAGGCTGTTGATGACCTTTGCTTGCATAAGCTGGAAGGAAAGCTTTACGAACGGATGCAGAAGGAGTGTGAAGAGCACATCTCTGCCGCTTTACATTCTTTAGTTGGCCAAGACACCGATCTCTCTGTTTTCTTGTCCCTCGTTGAGAAATGCTGGCAAGATTTCTGTGACCAGATGCTCATGATCCGGAGTATAGCCTTGTCTTTGGATAGGAAGTATGTTATACAGAACCCCAATGTACGTTCTTTGTGGGAGATGGGCCTTCAGCTTTTTCGCAAGCATCTTTCTCTCTCCCCCGACGTTGAGCAGAGGACTGTTACTGCTCTCTTAAGAATCATCGAAAAGGAAAGGTTAGCCGAAGCTGTTAATAGGACACTCCTAAGCCATCTTTTAAAGATGTTTACTGCACTGGGAATATATACGGAAGGCTTTGAGAAACCTTTCCTTGAATGCACTTCTGAATTTTATGCTGCTGAAGGAATGAAATACATGCAGCAGTATGACGTTCCGAGTACCTGA
Protein Sequence
- >BnaA09G0206600ZS
MSLPNKRSTCPAAASSASTTDSSYSSPPPMKKSKNGLHSPFPMEDEDPTPSAAANLSRKKATLPHPTKKLVIKLNKAKPTLPTNFEDTTWANLQSAIRAIFLKKPFSFDLERLYQAVDDLCLHKLEGKLYERMQKECEEHISAALHSLVGQDTDLSVFLSLVEKCWQDFCDQMLMIRSIALSLDRKYVIQNPNVRSLWEMGLQLFRKHLSLSPDVEQRTVTALLRIIEKERLAEAVNRTLLSHLLKMFTALGIYTEGFEKPFLECTSEFYAAEGMKYMQQYDVPST