Information report for BnaA09G0171700ZS
Gene Details
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Functional Annotation
- Encodes a protein with similarity to mammalian nucleoporin Nup98.Its expression is upregulated in mutants that are NUP deficient. Nucleoportin which redundantly inhibits flowering together with Nup98a through multiple pathways including clock, photoperiod, and age pathways. Gates flowering in a CONSTANS (CO)-independent mode and bypasses the CO checkpoint in photoperiodic signaling and integrated signals from multiple pathways to directly target FLOWERING LOCUS T (FT) for flowering control.
Homologous
- Beta vulgaris: BVRB_3g051250
- Brassica oleracea: Bo9g046570, Bo5g010850, Bo8g059390
- Brassica rapa: Bra018441, Bra019938
- Daucus carota: DCAR_023771
- Gossypium hirsutum: Gohir.A02G094700, Gohir.A08G108000
- Lactuca sativa: gene-LSAT_6X80720
- Nicotiana attenuata: A4A49_04265
- Solanum lycopersicum: Solyc04g007280.3
Gene Resources
- Pfam: PF04096
Sequences
gDNA Sequence
- >BnaA09G0171700ZS
GGTGAAGTATGACCATAGAAAATACTGGGAAAACAACATAAATGAACATGAGAAATGGTGATGCTGTTTCGGTGTTTCCATTTTTGAATATTACACTTTCTCATTTTGTTAAAAAGAAACACTTTTAACAGTTTTACAGAATAAAATCCTCAAATCTCCACAGCCACTAGACCACAGCCACCATTACCAATCCAAAAACCAACTTAAAATATTTTCCTAATAAAAACTCTGATAAAAGAGAGATTGCGGTAAGAAAGACGAGTAGAAAAGATCTAACGTCGTTGTCGTTTCCAACCATGTAAGAACTAAAAATGTTCGACCTTAAACTTCCACTCGCCATTCACAGCATCATAAGACACAAACTCAGCTCCTTGTTCTTCAGCTTTCCTCTTGAGCATTTCCTTATACTTCTCCACCCTCGGGCCTTCCTTCACTTGCTTCCCGCTCTTCTTGTCCATGCATTTTATGTTGAGCAACGTTACTTCCGCTGGCTTGTTCAGTCCCTGACCAACAGGAGGTTTCTGGCTCTCGTCCATGTACACAAGCACTTCCCTGTTGTTGAACTGAACCAACTTTTCCAAGTCGAGCTTACGCACATCCGTCTCTCCTAGAAACTTTATGCTGCCGTAACCGTGTCTCCCGACAACAAAGTCCCTCACCCGTCCGGTATAACCAGGATTAGCCCTTTCCTTTGCAGCTAGTTCTTGGACCCGGGGCTCTGTGAAATACTCAGCGTGATGCAGCTTTGGCAGCAATGACTCGACCTCTGCTCTACTTGGTGAACTCTTTGCGCCGTTCTTGTCGCCTCCGTGATTTTCATGTGTCTCATTGGCTTTTACCGGAGGAGCATCACGAACTTCACCATTACTCTTATCTGCGGATATTCATAATCAAGTCAGACAATGGTTTCAAAAAAGCACAAACATGAATCACTGTTTTGTTACATACGCATAAATTGAATACTTACTCTCGTTGTTAGCTCCATTAGTAATAACCCCATTCGATCTCTTACCTGAAATTCACATGTAAAAACGGTCAAGTGGGTCATGTTAAGAGTATAAGCATTCTCGGAGTGTTCAAAAACAAAGGTAGCATAGATCTCTCACTTCTTTGCAATTTAAAACTAAAGCCAATGAATGTCAAAAAGCAAGCTTACCATTCTCCTGCAGAGGGGTCGTCTCATCCTTCAGCGGTGCTGCTGTTTCCTTTTTAAGTGAGCGTATTAACAAAGCTCTCGGGTTTTCCCTTGGAGTGAGAAACGCATCAGCCCTAGGTGTATTGGAGTTCTCTTCATCACTGAAGAATGGAACCTGAAACAAACATGTAGAAAGAACTTCAGTAACAAAAATATAAAGATTACAGTTTAATTAAAGACCAAGGCGAGATTCAGAAAACAGTAAACATACCTTCGGACTATCATCCCCAGCACGGTACTTTCTTGCAGGCAGCATGACCCGTCTTTGCAAAAGATGTCGAGAAGTCAGGAGCGATGACACTCTGGCCGGTGCAGGTCTATCAACGACCTGGATAGAAAGAAAATATATGTGTTCGTAACATGGAGTCTTTGCTTATAAGCTGGTTTGTTCGTGTTGAAGGAAAGCACAATAAACTTACAGGCAAGCTGGAGATTCCATACTGAATCGAAGGTGAATTTCCACCTTGACCAATTGAAATCTGAGGCACAGCAGGAAGCGTTCCAAATGGGCTTGCAACAGGGTTTGGTTGCGTAGCAGTGAGGTTACTTACAGGGTTTGGTTGCGAAGCAGGCCTGTCAAAACAAAGACGAGAATGAACCGTAAATAAAATAATCTAAAAGGAGAAACAAGAGTCGAGAGAAACTCATGTACTTACACTTGTCCGAAGTTGACTGGACAAAATGACAATCCACCTGCAGCGGCTGTTTGAGTCTGACCAGAGTTGTTGAAACTGAAAGATGGTTGAGTTGGCTGAGTTGATTGCTGGAGTGTCGGACCAGAAGGCTACAACAAATAAACCAACGTTAGAAAAGTGAAAGAGACGTTGAGCTATAAAAAAATAAGTTACCTTTGTTTGACTTAAGGGAGCGATGCTTGATGGAAAGCTTGTAGACATGTTTGGGAATCCAGTGGAAGGTGTACTGAAAATGCTAGGTTGGGTATTTGTATTTTGTCCAAACCCAGTCTGTGCAAATGAGGGGTTTGAGCTAAACAGCTGAGCTGACTGACTGTTGTTAAAGTTTCCACTGCTAAATGCTGGAGTTGACCCTTGTGCAGGAGTCGAACTAAACAGTGACGGAGAGGAGCCAGAAGAATTGAAGACTGACGAAGAGGCAAATGAAGGAGTGTTTGATGGACCAAATGGCTGCGTAGTGGTTGCTGCAAAACCAGAGGATGGTGCAAAACCGGGTGTGGTATTTGATGAAGTTCCAAACAAGGATGGGGTAGTAGGTTGGCCAAAAGGAGACGAGAAATTTGTGTTAGTTGCTGGAGTGTTCTGGCTGAAAGGGTTTGGTGTGCTTTGAAAGGGGTTTGTTGGGTTTGCAGATGTCTGGCCGAAAGGGCTTGGGGTTGGTGCTGTCTGGCCGAAAGGGTTTGGGTTTGGGGTTATTGTGCTTTGAAAGGCGGTTGTTGGGTTTGCAGATGTCTGGCCGAAAGGACTGGGGGTTGGTGCTGTTTGGCCGAAAGAGTTTGGGTTTGGGGCTATTGTGCTTTGAAAGGCTTGTGTTGGATTTGTAGATGTCTGGCCGAAAGGGTTTGGGTTTGTAGATGTCTGGCCGAAAGGGTTTGGGTTTGTAGATGTCTGGCCGAAAGGGTTTGGTTTTGGGGCTATTGTGCTTTGAAAGGTGTGTGTTGGATTTGTAGGATTGGTAGATGTCTGGCCGAAAGGGTTCGTGGGCTGAGAGAACACACTAGCTTGACCCGCAGGAAGTTTTCCACCTGAAAATTGAATTAAGAAAATCAGTATACTGAAACATAAATACAAACATCTAATGTGAGACAATGGATTTGTTATTTTACCTTTATCTCCCCGCTGGAAGTCCTCCCACCTGAGCTCCTCATGGCATTTTTCTTTGTGGACAGTCATAGCAGAAATTGATTGTAGCTTCCCAGGGGCTCCAGTTCCAGACTCTGCATCTATTGTAGATGTATATGGAATGATTCTACTACCACCCTGTTGTTGATTTCCAAAGGTTGTTGAGTTCGAAGACTGAGAACCTGCAAGACAAAACATGTATGTAAGTATTATTCATAACATCTTTTGAATAGGAATTTGCAAATCTAATTCTGTAACTGAATAATACTAGCTAAAAGAGAACCTTGAGCTCCAAAGGGAGAATGCGTAGTCTGTCCGAAAGCTGGGGAGGAGCCAAAACCAAAGGCAGGAGTGGTTGAAGCGCCAAACGCAGGAGTGGTTGAAGCGCCAAACCCAGGTGTACCTGAAGCACCTCCAGAACCAAAAGCATTGTTGCCAAATGCAGTGCCAGAGTTACCAAAGGCAGGAGTGGGTGACACGCCAAATGCAGGTGTGCTTGAGGCACCGAAGGCAGATGTATTGGTGGAGCCGAAGGCAGGTGTGCTTGAGGCGCCGAAGGCAGATGTATTCGTAGAGCCAAAGGCAGGAGTGGTGGAGGCACCAAAGGGTGTAGATGACCCGAAAGTGCTGTTTCCAAAAGCAGGCTGTGACTGTTGTGTGGTGCTTCCGAAAGGACTTGACTGAGGCGTTGAGAAGCCATTCTGTCCAAATGTTGAAGTGCCTAAAACAGAAGAAACTTACGTATCAGACAATCAAACGCTTGAAAAAAATAACATGTATCAAAAGTATAAGTTAACAATGTCAGTCCTAGTGTGAGAAAGTAAGTTCCTATCAATGTTACAAGCAATAGATTATTGACACACACACACAAAAAAACAAAGGCAATAGATATACTTACCACCAAAAGGTGAAGGCGAATTGCCAAAGGCAGGAGCAGAAGGTGCTCCAAAGCTCGGAGTAGAGCTCCCAAACCCTTGTGATGAAGCACCAAAAGGGGAAGAAGCTTGAGCCTGACCAAACACACCGGTTGAAGTACCTCCAAACATAGAACCACCGGTCTGCGCACCAAAAGGACTAGAAGCACCAAAAGGGGAAGAAGCTTGAGCCTGACCAAACACACCGGTTGAAGTGCCTCCAAACATAGAACCACCAGTCTGCGCGCCAAAAGGACTAGAAGCACCAAAGGGCTTTGGCGCAAAGGGATTATTACTAGACGCGTTGTTGTTCTGACCAAACACAGATTGAGTTTGGGTCCCAAAAGGACTGCTGCTGCTAGATCCCTGTCCAAAAGCTGTAAAACAAAAACACACAGCGTGTTAAGTTTGGAATGGCAAAAGCTATAAACGGACGAAAAGCAGAGTAAAGAGATACGATGACTTACGATTAGATGCGCCAAACATCTTGTTATATATGTTTATTAGCGAAGTAGACTGTTTCTTCTAGGCTGGTACAAGAGAAAGCAAAAGACATCAGGAATCATTATAAGCAGAACCAAAAGAGAGTCATGAAGGTGGCCCGTTTACACAAACCATTAAACACACAAACAATACTCAAAACTGAACACCGACATTACACAATGCAGCATTACAAGATGCGATTTAGAAGCAAACCGATACTAATCGAAACCTAACTTCAACAACATAAAACTACGCCTCACGAATACGAGACACGAATTAGGGGTCTAACTCGAATCAGAGAGGGATATAGGGAACCGAACCTGAAGTGAAGTGCGACGAGGAATCAACGGATACGATGACAAGGATAGAGAGAGAAAACTCGCCGGGATATAATGTTTTTTGGGAGGAAGAAGGTAAAAAAGCAGAGTTATTATATATAAAGTGGCAGGTGGGTTGCGTCGTTCTCAAGTGCGTCAAGCGTACGCCTAGCGTCTTTCCGACGCCGCTGTGATTTGTTAACCGGTTTTGCTTCGCG
CDS Sequence
- >BnaA09G0171700ZS
ATGTTTGGCGCATCTAATCCTTTTGGACAGGGATCTAGCAGCAGCAGTCCTTTTGGGACCCAAACTCAATCTGTGTTTGGTCAGAACAACAACGCGTCTAGTAATAATCCCTTTGCGCCAAAGCCCTTTGGTGCTTCTAGTCCTTTTGGCGCGCAGACTGGTGGTTCTATGTTTGGAGGCACTTCAACCGGTGTGTTTGGTCAGGCTCAAGCTTCTTCCCCTTTTGGTGCTTCTAGTCCTTTTGGTGCGCAGACCGGTGGTTCTATGTTTGGAGGTACTTCAACCGGTGTGTTTGGTCAGGCTCAAGCTTCTTCCCCTTTTGGTGCTTCATCACAAGGGTTTGGGAGCTCTACTCCGAGCTTTGGAGCACCTTCTGCTCCTGCCTTTGGCAATTCGCCTTCACCTTTTGGTGGCACTTCAACATTTGGACAGAATGGCTTCTCAACGCCTCAGTCAAGTCCTTTCGGAAGCACCACACAACAGTCACAGCCTGCTTTTGGAAACAGCACTTTCGGGTCATCTACACCCTTTGGTGCCTCCACCACTCCTGCCTTTGGCTCTACGAATACATCTGCCTTCGGCGCCTCAAGCACACCTGCCTTCGGCTCCACCAATACATCTGCCTTCGGTGCCTCAAGCACACCTGCATTTGGCGTGTCACCCACTCCTGCCTTTGGTAACTCTGGCACTGCATTTGGCAACAATGCTTTTGGTTCTGGAGGTGCTTCAGGTACACCTGGGTTTGGCGCTTCAACCACTCCTGCGTTTGGCGCTTCAACCACTCCTGCCTTTGGTTTTGGCTCCTCCCCAGCTTTCGGACAGACTACGCATTCTCCCTTTGGAGCTCAAGGTTCTCAGTCTTCGAACTCAACAACCTTTGGAAATCAACAACAGGGTGGTAGTAGAATCATTCCATATACATCTACAATAGATGCAGAGTCTGGAACTGGAGCCCCTGGGAAGCTACAATCAATTTCTGCTATGACTGTCCACAAAGAAAAATGCCATGAGGAGCTCAGGTGGGAGGACTTCCAGCGGGGAGATAAAGGTGGAAAACTTCCTGCGGGTCAAGCTAGTGTGTTCTCTCAGCCCACGAACCCTTTCGGCCAGACATCTACCAATCCTACAAATCCAACACACACCTTTCAAAGCACAATAGCCCCAAAACCAAACCCTTTCGGCCAGACATCTACAAACCCAAACCCTTTCGGCCAGACATCTACAAACCCAAACCCTTTCGGCCAGACATCTACAAATCCAACACAAGCCTTTCAAAGCACAATAGCCCCAAACCCAAACTCTTTCGGCCAAACAGCACCAACCCCCAGTCCTTTCGGCCAGACATCTGCAAACCCAACAACCGCCTTTCAAAGCACAATAACCCCAAACCCAAACCCTTTCGGCCAGACAGCACCAACCCCAAGCCCTTTCGGCCAGACATCTGCAAACCCAACAAACCCCTTTCAAAGCACACCAAACCCTTTCAGCCAGAACACTCCAGCAACTAACACAAATTTCTCGTCTCCTTTTGGCCAACCTACTACCCCATCCTTGTTTGGAACTTCATCAAATACCACACCCGGTTTTGCACCATCCTCTGGTTTTGCAGCAACCACTACGCAGCCATTTGGTCCATCAAACACTCCTTCATTTGCCTCTTCGTCAGTCTTCAATTCTTCTGGCTCCTCTCCGTCACTGTTTAGTTCGACTCCTGCACAAGGGTCAACTCCAGCATTTAGCAGTGGAAACTTTAACAACAGTCAGTCAGCTCAGCTGTTTAGCTCAAACCCCTCATTTGCACAGACTGGGTTTGGACAAAATACAAATACCCAACCTAGCATTTTCAGTACACCTTCCACTGGATTCCCAAACATGTCTACAAGCTTTCCATCAAGCATCGCTCCCTTAAGTCAAACAAAGCCTTCTGGTCCGACACTCCAGCAATCAACTCAGCCAACTCAACCATCTTTCAGTTTCAACAACTCTGGTCAGACTCAAACAGCCGCTGCAGGTGGATTGTCATTTTGTCCAGTCAACTTCGGACAAGTGCCTGCTTCGCAACCAAACCCTGTAAGTAACCTCACTGCTACGCAACCAAACCCTGTTGCAAGCCCATTTGGAACGCTTCCTGCTGTGCCTCAGATTTCAATTGGTCAAGGTGGAAATTCACCTTCGATTCAGTATGGAATCTCCAGCTTGCCTGTCGTTGATAGACCTGCACCGGCCAGAGTGTCATCGCTCCTGACTTCTCGACATCTTTTGCAAAGACGGGTCATGCTGCCTGCAAGAAAGTACCGTGCTGGGGATGATAGTCCGAAGGTTCCATTCTTCAGTGATGAAGAGAACTCCAATACACCTAGGGCTGATGCGTTTCTCACTCCAAGGGAAAACCCGAGAGCTTTGTTAATACGCTCACTTAAAAAGGAAACAGCAGCACCGCTGAAGGATGAGACGACCCCTCTGCAGGAGAATGGTAAGAGATCGAATGGGGTTATTACTAATGGAGCTAACAACGAGAATAAGAGTAATGGTGAAGTTCGTGATGCTCCTCCGGTAAAAGCCAATGAGACACATGAAAATCACGGAGGCGACAAGAACGGCGCAAAGAGTTCACCAAGTAGAGCAGAGGTCGAGTCATTGCTGCCAAAGCTGCATCACGCTGAGTATTTCACAGAGCCCCGGGTCCAAGAACTAGCTGCAAAGGAAAGGGCTAATCCTGGTTATACCGGACGGGTGAGGGACTTTGTTGTCGGGAGACACGGTTACGGCAGCATAAAGTTTCTAGGAGAGACGGATGTGCGTAAGCTCGACTTGGAAAAGTTGGTTCAGTTCAACAACAGGGAAGTGCTTGTGTACATGGACGAGAGCCAGAAACCTCCTGTTGGTCAGGGACTGAACAAGCCAGCGGAAGTAACGTTGCTCAACATAAAATGCATGGACAAGAAGAGCGGGAAGCAAGTGAAGGAAGGCCCGAGGGTGGAGAAGTATAAGGAAATGCTCAAGAGGAAAGCTGAAGAACAAGGAGCTGAGTTTGTGTCTTATGATGCTGTGAATGGCGAGTGGAAGTTTAAGGTCGAACATTTTTAG
Protein Sequence
- >BnaA09G0171700ZS
MFGASNPFGQGSSSSSPFGTQTQSVFGQNNNASSNNPFAPKPFGASSPFGAQTGGSMFGGTSTGVFGQAQASSPFGASSPFGAQTGGSMFGGTSTGVFGQAQASSPFGASSQGFGSSTPSFGAPSAPAFGNSPSPFGGTSTFGQNGFSTPQSSPFGSTTQQSQPAFGNSTFGSSTPFGASTTPAFGSTNTSAFGASSTPAFGSTNTSAFGASSTPAFGVSPTPAFGNSGTAFGNNAFGSGGASGTPGFGASTTPAFGASTTPAFGFGSSPAFGQTTHSPFGAQGSQSSNSTTFGNQQQGGSRIIPYTSTIDAESGTGAPGKLQSISAMTVHKEKCHEELRWEDFQRGDKGGKLPAGQASVFSQPTNPFGQTSTNPTNPTHTFQSTIAPKPNPFGQTSTNPNPFGQTSTNPNPFGQTSTNPTQAFQSTIAPNPNSFGQTAPTPSPFGQTSANPTTAFQSTITPNPNPFGQTAPTPSPFGQTSANPTNPFQSTPNPFSQNTPATNTNFSSPFGQPTTPSLFGTSSNTTPGFAPSSGFAATTTQPFGPSNTPSFASSSVFNSSGSSPSLFSSTPAQGSTPAFSSGNFNNSQSAQLFSSNPSFAQTGFGQNTNTQPSIFSTPSTGFPNMSTSFPSSIAPLSQTKPSGPTLQQSTQPTQPSFSFNNSGQTQTAAAGGLSFCPVNFGQVPASQPNPVSNLTATQPNPVASPFGTLPAVPQISIGQGGNSPSIQYGISSLPVVDRPAPARVSSLLTSRHLLQRRVMLPARKYRAGDDSPKVPFFSDEENSNTPRADAFLTPRENPRALLIRSLKKETAAPLKDETTPLQENGKRSNGVITNGANNENKSNGEVRDAPPVKANETHENHGGDKNGAKSSPSRAEVESLLPKLHHAEYFTEPRVQELAAKERANPGYTGRVRDFVVGRHGYGSIKFLGETDVRKLDLEKLVQFNNREVLVYMDESQKPPVGQGLNKPAEVTLLNIKCMDKKSGKQVKEGPRVEKYKEMLKRKAEEQGAEFVSYDAVNGEWKFKVEHF