Gene Details:
- Gene ID: BnaA09G0152900ZS
- Suggest Gene Name: LSD1-LIKE 1
- Description: putative flowering gene
- Species: Brassica napus
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Arabidopsis thaliana — AT1G62830
Sequences:
gDNA Sequence
- >BnaA09G0152900ZS
ACAAACGCTACACAGATCATATAAGCTTCACTGCAATGGAGCAAAACCAAGAGATCCGACCCGAAAGCCCGGAAAATCCGAAGATGGCCACGGATAATTTGACCAACGCCGAAGCCTCTCCAACGAAGGAAGCCTCCAACACCGACGTAAACGACGGCAAAATCGACAAGAACGTCGCCGCGGCGGATCCAAACCCTACACCCGCCGCGAAGCTGCAACCAAGCGAATCCGACGAGGAGGTGGACCTCCCAAGCATCTCAGAATCCCTCGGGGAAGAAGAATCCTCCGATCTCGTAACAGAGCCACAATCGCAAAACCCTAATCCACTAGAGCCGGGACCCAGGGCGAGAAAACGACGCCGTAGGAAACGTTTCTTCACGGAGATAAACGCGAACCCAGCTTTCCCTCGTAACCGCCGCAACAGCGTCGGGAAAGAGCTCGATTCCGAAGCCATAACGGCGATGTCGGTAGGGTTTCCGGTAAACTCGCTCACAGAGGAAGAGATCGAAGCCAATGTGGTATCGATCATCGGAGGCAAAGAGCAGGCGAACTACATCGTCGTGAGGAACCACATCATCGCCTTGTGGAGATCCAACGTCTCGAATTGGCTTACGAGAGATCACGCTCTTGAGTCTATACGATTGGAGCATAAAACGTTGGTTGATACTGCTTACAAGTTCCTTCTTGAGCACGGTTATATTAATTTCGGTTTAGCTCCGGTTATCAAAGAGGCGAAATTGAGGTCCTTTGACGGTTTGGAGCCGCCTAATGTGGTTGTTGTGGGTGCCGGTTTAGCTGGTTTGGTGGCTGCTAGGCAGTTGTTGTCGATGGGGTTTAGGGTTTTGGTTTTGGAAGGGAGAGATAGACCGGGCGGGCGGGTTAAGACCCGGAAGATGAGAGGTGGGGATGGTGTTGAAGCAATGGCTGATGTTGGTGGGAGTGTGTTGACTGGGATTAATGGGAACCCTCTTGGCGTGTTGGCGAGGCAGCTTGGTTTGCCTCTCCATAAGGTTAGAGATATATGTCCTTTGTATCTACCTAGCGGTGAGCTTGTTGATGTTGGTGTTGATTCTAAGATAGAGGCTTCGTTTAATAAGTTGCTGGATAGGGTTTGTAAGCTTAGGCAGTCGATGATAGAGGAGATTAAGTCAGTAGATGTGCCGTTAGGTGAAGCGCTGGAGACGTTTAGGTTGGTTTACGGTGTTGCTGAGGATCAGGAGGAGAGGATGCTGTTTGATTGGCATTTAGCGAATTTGGAGTATGCGAATGCTACACTGTTGGGGAACTTGTCGATGGCGTATTGGGATCAGGATGATCCGTACGAGATGGGGGGTGATCATTGCTTCATCCCCGGCGGGAACGAGACGTTTGTGCACGCCTTGGCTGAGAATCTGCCTGTTTTTTATGGGAACGTTGTGGAGAGCATTAGGTATGGAAGTGACGGGGTTGTGGTTTACGCGGGGGATAAGGAGTTCTCCTGCGACATGGCTCTTTGCACGGTTCCGTTGGGTGTTCTGAAGAAAGGTGGCATCGGGTTTGTTCCTGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGGTTAGGATACGGGTTGTTGAACAAAGTGGCGATGTTGTTTCCTTATAACTTTTGGGGGGAAGAGATTGATACGTTTGGGAGGTTAACAGAAGATTCGAGCACGAGAGGAGAGTTCTTCTTGTTCTACAGCTACTCTTCCGTCTCCGGTGGTCCGTTACTTGTAGCGCTTGTAGCTGGAGACGCCGCGGAAAGGTTCGAGACGATGTCGCCTACTGATTCCGTTAAAAGGGTGTTGCAGATACTACGCGGGATTTATCACCCGAAAGGGATCGTTGTTCCTGATCCGGTTCAAGCGCTCTGTTCCAGATGGGGACAAGACAAGTTTTCGTACGGTTCTTACTCGTATGTTGCGGTGGGATCATCTGGTGATGATTATGACATTTTAGCTGAGAGTGTTGGAGATGGAAGAGTGTTCTTTGCTGGTGAAGCGACGAACAAACAGTATCCGGCTACAATGCATGGAGCTTTCTTAAGCGGAATGAGAGAAGCAGCAAATATACTTAGAGTTGCTAGAAGAAGGGCGTCAGAATCGGCTTCAAACCTTGCTAAGTGAGATCTAATCGTTAGGTTCATTTTTAATATCGAATCCTGGAAGTGTCATAGATGTTCTTTGGTGCTTGAACTTGCCTTCGTCTTCTGTATCAAGTTAGTGCTCTTCGAGTTTGACTTTGGCTTGTTCTACACCACATTATCGTCTAAGTTCATTAACTATGATTGTTGTGTTGGGGAACTTGGGATCTTGAAATGATATCATAGATGTTGTGTTTGATCTTCAGCTATGATTTGTAACAGTATCCTTGGATTTTCGTCTAATCATGTGTTGTTGGGTTTCCATGTCAAGTCAAATATACGGCAGAGAAAGGGTTATAAATCTGATTTGCAAGTCATTGAAACGCAGATCACGATGAAGAAAGTGTCTTTTCATCCCATTTTTGTCTTCATGTTCTGCATCAAATCATTTCTCTTTGAGATTGGTTTTGGCTTAGACACATTATCGTCTTGTTCATTTCTTACTCTGGTGGAATGCTGGAATTTATGAGTGTGTGTGGCTATGATTGTTGAGTTGGGAACTTGTGATCTTGAAACGGTCTTAGAGATCTTGGCGTTTGATGTTCAGTTTTGTTTGCTTAATATCCTTGTAATGATTATGAACTATTGGGTTTCCTTGCTAAAGTCTAAGTTCATGGTAGAGTAAGGATTATAGACTTGATGTGCA
CDS Sequence
- >BnaA09G0152900ZS
ATGGAGCAAAACCAAGAGATCCGACCCGAAAGCCCGGAAAATCCGAAGATGGCCACGGATAATTTGACCAACGCCGAAGCCTCTCCAACGAAGGAAGCCTCCAACACCGACGTAAACGACGGCAAAATCGACAAGAACGTCGCCGCGGCGGATCCAAACCCTACACCCGCCGCGAAGCTGCAACCAAGCGAATCCGACGAGGAGGTGGACCTCCCAAGCATCTCAGAATCCCTCGGGGAAGAAGAATCCTCCGATCTCGTAACAGAGCCACAATCGCAAAACCCTAATCCACTAGAGCCGGGACCCAGGGCGAGAAAACGACGCCGTAGGAAACGTTTCTTCACGGAGATAAACGCGAACCCAGCTTTCCCTCGTAACCGCCGCAACAGCGTCGGGAAAGAGCTCGATTCCGAAGCCATAACGGCGATGTCGGTAGGGTTTCCGGTAAACTCGCTCACAGAGGAAGAGATCGAAGCCAATGTGGTATCGATCATCGGAGGCAAAGAGCAGGCGAACTACATCGTCGTGAGGAACCACATCATCGCCTTGTGGAGATCCAACGTCTCGAATTGGCTTACGAGAGATCACGCTCTTGAGTCTATACGATTGGAGCATAAAACGTTGGTTGATACTGCTTACAAGTTCCTTCTTGAGCACGGTTATATTAATTTCGGTTTAGCTCCGGTTATCAAAGAGGCGAAATTGAGGTCCTTTGACGGTTTGGAGCCGCCTAATGTGGTTGTTGTGGGTGCCGGTTTAGCTGGTTTGGTGGCTGCTAGGCAGTTGTTGTCGATGGGGTTTAGGGTTTTGGTTTTGGAAGGGAGAGATAGACCGGGCGGGCGGGTTAAGACCCGGAAGATGAGAGGTGGGGATGGTGTTGAAGCAATGGCTGATGTTGGTGGGAGTGTGTTGACTGGGATTAATGGGAACCCTCTTGGCGTGTTGGCGAGGCAGCTTGGTTTGCCTCTCCATAAGGTTAGAGATATATGTCCTTTGTATCTACCTAGCGGTGAGCTTGTTGATGTTGGTGTTGATTCTAAGATAGAGGCTTCGTTTAATAAGTTGCTGGATAGGGTTTGTAAGCTTAGGCAGTCGATGATAGAGGAGATTAAGTCAGTAGATGTGCCGTTAGGTGAAGCGCTGGAGACGTTTAGGTTGGTTTACGGTGTTGCTGAGGATCAGGAGGAGAGGATGCTGTTTGATTGGCATTTAGCGAATTTGGAGTATGCGAATGCTACACTGTTGGGGAACTTGTCGATGGCGTATTGGGATCAGGATGATCCGTACGAGATGGGGGGTGATCATTGCTTCATCCCCGGCGGGAACGAGACGTTTGTGCACGCCTTGGCTGAGAATCTGCCTGTTTTTTATGGGAACGTTGTGGAGAGCATTAGGTATGGAAGTGACGGGGTTGTGGTTTACGCGGGGGATAAGGAGTTCTCCTGCGACATGGCTCTTTGCACGGTTCCGTTGGGTGTTCTGAAGAAAGGTGGCATCGGGTTTGTTCCTGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGGTTAGGATACGGGTTGTTGAACAAAGTGGCGATGTTGTTTCCTTATAACTTTTGGGGGGAAGAGATTGATACGTTTGGGAGGTTAACAGAAGATTCGAGCACGAGAGGAGAGTTCTTCTTGTTCTACAGCTACTCTTCCGTCTCCGGTGGTCCGTTACTTGTAGCGCTTGTAGCTGGAGACGCCGCGGAAAGGTTCGAGACGATGTCGCCTACTGATTCCGTTAAAAGGGTGTTGCAGATACTACGCGGGATTTATCACCCGAAAGGGATCGTTGTTCCTGATCCGGTTCAAGCGCTCTGTTCCAGATGGGGACAAGACAAGTTTTCGTACGGTTCTTACTCGTATGTTGCGGTGGGATCATCTGGTGATGATTATGACATTTTAGCTGAGAGTGTTGGAGATGGAAGAGTGTTCTTTGCTGGTGAAGCGACGAACAAACAGTATCCGGCTACAATGCATGGAGCTTTCTTAAGCGGAATGAGAGAAGCAGCAAATATACTTAGAGTTGCTAGAAGAAGGGCGTCAGAATCGGCTTCAAACCTTGCTAAGTGA
Protein Sequence
- >BnaA09G0152900ZS
MEQNQEIRPESPENPKMATDNLTNAEASPTKEASNTDVNDGKIDKNVAAADPNPTPAAKLQPSESDEEVDLPSISESLGEEESSDLVTEPQSQNPNPLEPGPRARKRRRRKRFFTEINANPAFPRNRRNSVGKELDSEAITAMSVGFPVNSLTEEEIEANVVSIIGGKEQANYIVVRNHIIALWRSNVSNWLTRDHALESIRLEHKTLVDTAYKFLLEHGYINFGLAPVIKEAKLRSFDGLEPPNVVVVGAGLAGLVAARQLLSMGFRVLVLEGRDRPGGRVKTRKMRGGDGVEAMADVGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPSGELVDVGVDSKIEASFNKLLDRVCKLRQSMIEEIKSVDVPLGEALETFRLVYGVAEDQEERMLFDWHLANLEYANATLLGNLSMAYWDQDDPYEMGGDHCFIPGGNETFVHALAENLPVFYGNVVESIRYGSDGVVVYAGDKEFSCDMALCTVPLGVLKKGGIGFVPELPEKKKEAIQRLGYGLLNKVAMLFPYNFWGEEIDTFGRLTEDSSTRGEFFLFYSYSSVSGGPLLVALVAGDAAERFETMSPTDSVKRVLQILRGIYHPKGIVVPDPVQALCSRWGQDKFSYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNKQYPATMHGAFLSGMREAANILRVARRRASESASNLAK