Information report for BnaA09G0152900ZS
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Brassica oleracea: Bo9g036780
- Brassica rapa: Bra027014
- Glycine max: Glyma.09G185800
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A078IAP6
- RefSeq: XP_013661606.1
- EMBL: HG994363 , LK032690
- AlphaFoldDB: A0A078IAP6
- KEGG: bna:106366542
- OMA: NIMSENT
- InterPro: IPR001613 , IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A078IAP6
- SMR: A0A078IAP6
- STRING: 3708.A0A078IAP6
Sequences
gDNA Sequence
- >BnaA09G0152900ZS
ACAAACGCTACACAGATCATATAAGCTTCACTGCAATGGAGCAAAACCAAGAGATCCGACCCGAAAGCCCGGAAAATCCGAAGATGGCCACGGATAATTTGACCAACGCCGAAGCCTCTCCAACGAAGGAAGCCTCCAACACCGACGTAAACGACGGCAAAATCGACAAGAACGTCGCCGCGGCGGATCCAAACCCTACACCCGCCGCGAAGCTGCAACCAAGCGAATCCGACGAGGAGGTGGACCTCCCAAGCATCTCAGAATCCCTCGGGGAAGAAGAATCCTCCGATCTCGTAACAGAGCCACAATCGCAAAACCCTAATCCACTAGAGCCGGGACCCAGGGCGAGAAAACGACGCCGTAGGAAACGTTTCTTCACGGAGATAAACGCGAACCCAGCTTTCCCTCGTAACCGCCGCAACAGCGTCGGGAAAGAGCTCGATTCCGAAGCCATAACGGCGATGTCGGTAGGGTTTCCGGTAAACTCGCTCACAGAGGAAGAGATCGAAGCCAATGTGGTATCGATCATCGGAGGCAAAGAGCAGGCGAACTACATCGTCGTGAGGAACCACATCATCGCCTTGTGGAGATCCAACGTCTCGAATTGGCTTACGAGAGATCACGCTCTTGAGTCTATACGATTGGAGCATAAAACGTTGGTTGATACTGCTTACAAGTTCCTTCTTGAGCACGGTTATATTAATTTCGGTTTAGCTCCGGTTATCAAAGAGGCGAAATTGAGGTCCTTTGACGGTTTGGAGCCGCCTAATGTGGTTGTTGTGGGTGCCGGTTTAGCTGGTTTGGTGGCTGCTAGGCAGTTGTTGTCGATGGGGTTTAGGGTTTTGGTTTTGGAAGGGAGAGATAGACCGGGCGGGCGGGTTAAGACCCGGAAGATGAGAGGTGGGGATGGTGTTGAAGCAATGGCTGATGTTGGTGGGAGTGTGTTGACTGGGATTAATGGGAACCCTCTTGGCGTGTTGGCGAGGCAGCTTGGTTTGCCTCTCCATAAGGTTAGAGATATATGTCCTTTGTATCTACCTAGCGGTGAGCTTGTTGATGTTGGTGTTGATTCTAAGATAGAGGCTTCGTTTAATAAGTTGCTGGATAGGGTTTGTAAGCTTAGGCAGTCGATGATAGAGGAGATTAAGTCAGTAGATGTGCCGTTAGGTGAAGCGCTGGAGACGTTTAGGTTGGTTTACGGTGTTGCTGAGGATCAGGAGGAGAGGATGCTGTTTGATTGGCATTTAGCGAATTTGGAGTATGCGAATGCTACACTGTTGGGGAACTTGTCGATGGCGTATTGGGATCAGGATGATCCGTACGAGATGGGGGGTGATCATTGCTTCATCCCCGGCGGGAACGAGACGTTTGTGCACGCCTTGGCTGAGAATCTGCCTGTTTTTTATGGGAACGTTGTGGAGAGCATTAGGTATGGAAGTGACGGGGTTGTGGTTTACGCGGGGGATAAGGAGTTCTCCTGCGACATGGCTCTTTGCACGGTTCCGTTGGGTGTTCTGAAGAAAGGTGGCATCGGGTTTGTTCCTGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGGTTAGGATACGGGTTGTTGAACAAAGTGGCGATGTTGTTTCCTTATAACTTTTGGGGGGAAGAGATTGATACGTTTGGGAGGTTAACAGAAGATTCGAGCACGAGAGGAGAGTTCTTCTTGTTCTACAGCTACTCTTCCGTCTCCGGTGGTCCGTTACTTGTAGCGCTTGTAGCTGGAGACGCCGCGGAAAGGTTCGAGACGATGTCGCCTACTGATTCCGTTAAAAGGGTGTTGCAGATACTACGCGGGATTTATCACCCGAAAGGGATCGTTGTTCCTGATCCGGTTCAAGCGCTCTGTTCCAGATGGGGACAAGACAAGTTTTCGTACGGTTCTTACTCGTATGTTGCGGTGGGATCATCTGGTGATGATTATGACATTTTAGCTGAGAGTGTTGGAGATGGAAGAGTGTTCTTTGCTGGTGAAGCGACGAACAAACAGTATCCGGCTACAATGCATGGAGCTTTCTTAAGCGGAATGAGAGAAGCAGCAAATATACTTAGAGTTGCTAGAAGAAGGGCGTCAGAATCGGCTTCAAACCTTGCTAAGTGAGATCTAATCGTTAGGTTCATTTTTAATATCGAATCCTGGAAGTGTCATAGATGTTCTTTGGTGCTTGAACTTGCCTTCGTCTTCTGTATCAAGTTAGTGCTCTTCGAGTTTGACTTTGGCTTGTTCTACACCACATTATCGTCTAAGTTCATTAACTATGATTGTTGTGTTGGGGAACTTGGGATCTTGAAATGATATCATAGATGTTGTGTTTGATCTTCAGCTATGATTTGTAACAGTATCCTTGGATTTTCGTCTAATCATGTGTTGTTGGGTTTCCATGTCAAGTCAAATATACGGCAGAGAAAGGGTTATAAATCTGATTTGCAAGTCATTGAAACGCAGATCACGATGAAGAAAGTGTCTTTTCATCCCATTTTTGTCTTCATGTTCTGCATCAAATCATTTCTCTTTGAGATTGGTTTTGGCTTAGACACATTATCGTCTTGTTCATTTCTTACTCTGGTGGAATGCTGGAATTTATGAGTGTGTGTGGCTATGATTGTTGAGTTGGGAACTTGTGATCTTGAAACGGTCTTAGAGATCTTGGCGTTTGATGTTCAGTTTTGTTTGCTTAATATCCTTGTAATGATTATGAACTATTGGGTTTCCTTGCTAAAGTCTAAGTTCATGGTAGAGTAAGGATTATAGACTTGATGTGCA
CDS Sequence
- >BnaA09G0152900ZS
ATGGAGCAAAACCAAGAGATCCGACCCGAAAGCCCGGAAAATCCGAAGATGGCCACGGATAATTTGACCAACGCCGAAGCCTCTCCAACGAAGGAAGCCTCCAACACCGACGTAAACGACGGCAAAATCGACAAGAACGTCGCCGCGGCGGATCCAAACCCTACACCCGCCGCGAAGCTGCAACCAAGCGAATCCGACGAGGAGGTGGACCTCCCAAGCATCTCAGAATCCCTCGGGGAAGAAGAATCCTCCGATCTCGTAACAGAGCCACAATCGCAAAACCCTAATCCACTAGAGCCGGGACCCAGGGCGAGAAAACGACGCCGTAGGAAACGTTTCTTCACGGAGATAAACGCGAACCCAGCTTTCCCTCGTAACCGCCGCAACAGCGTCGGGAAAGAGCTCGATTCCGAAGCCATAACGGCGATGTCGGTAGGGTTTCCGGTAAACTCGCTCACAGAGGAAGAGATCGAAGCCAATGTGGTATCGATCATCGGAGGCAAAGAGCAGGCGAACTACATCGTCGTGAGGAACCACATCATCGCCTTGTGGAGATCCAACGTCTCGAATTGGCTTACGAGAGATCACGCTCTTGAGTCTATACGATTGGAGCATAAAACGTTGGTTGATACTGCTTACAAGTTCCTTCTTGAGCACGGTTATATTAATTTCGGTTTAGCTCCGGTTATCAAAGAGGCGAAATTGAGGTCCTTTGACGGTTTGGAGCCGCCTAATGTGGTTGTTGTGGGTGCCGGTTTAGCTGGTTTGGTGGCTGCTAGGCAGTTGTTGTCGATGGGGTTTAGGGTTTTGGTTTTGGAAGGGAGAGATAGACCGGGCGGGCGGGTTAAGACCCGGAAGATGAGAGGTGGGGATGGTGTTGAAGCAATGGCTGATGTTGGTGGGAGTGTGTTGACTGGGATTAATGGGAACCCTCTTGGCGTGTTGGCGAGGCAGCTTGGTTTGCCTCTCCATAAGGTTAGAGATATATGTCCTTTGTATCTACCTAGCGGTGAGCTTGTTGATGTTGGTGTTGATTCTAAGATAGAGGCTTCGTTTAATAAGTTGCTGGATAGGGTTTGTAAGCTTAGGCAGTCGATGATAGAGGAGATTAAGTCAGTAGATGTGCCGTTAGGTGAAGCGCTGGAGACGTTTAGGTTGGTTTACGGTGTTGCTGAGGATCAGGAGGAGAGGATGCTGTTTGATTGGCATTTAGCGAATTTGGAGTATGCGAATGCTACACTGTTGGGGAACTTGTCGATGGCGTATTGGGATCAGGATGATCCGTACGAGATGGGGGGTGATCATTGCTTCATCCCCGGCGGGAACGAGACGTTTGTGCACGCCTTGGCTGAGAATCTGCCTGTTTTTTATGGGAACGTTGTGGAGAGCATTAGGTATGGAAGTGACGGGGTTGTGGTTTACGCGGGGGATAAGGAGTTCTCCTGCGACATGGCTCTTTGCACGGTTCCGTTGGGTGTTCTGAAGAAAGGTGGCATCGGGTTTGTTCCTGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGGTTAGGATACGGGTTGTTGAACAAAGTGGCGATGTTGTTTCCTTATAACTTTTGGGGGGAAGAGATTGATACGTTTGGGAGGTTAACAGAAGATTCGAGCACGAGAGGAGAGTTCTTCTTGTTCTACAGCTACTCTTCCGTCTCCGGTGGTCCGTTACTTGTAGCGCTTGTAGCTGGAGACGCCGCGGAAAGGTTCGAGACGATGTCGCCTACTGATTCCGTTAAAAGGGTGTTGCAGATACTACGCGGGATTTATCACCCGAAAGGGATCGTTGTTCCTGATCCGGTTCAAGCGCTCTGTTCCAGATGGGGACAAGACAAGTTTTCGTACGGTTCTTACTCGTATGTTGCGGTGGGATCATCTGGTGATGATTATGACATTTTAGCTGAGAGTGTTGGAGATGGAAGAGTGTTCTTTGCTGGTGAAGCGACGAACAAACAGTATCCGGCTACAATGCATGGAGCTTTCTTAAGCGGAATGAGAGAAGCAGCAAATATACTTAGAGTTGCTAGAAGAAGGGCGTCAGAATCGGCTTCAAACCTTGCTAAGTGA
Protein Sequence
- >BnaA09G0152900ZS
MEQNQEIRPESPENPKMATDNLTNAEASPTKEASNTDVNDGKIDKNVAAADPNPTPAAKLQPSESDEEVDLPSISESLGEEESSDLVTEPQSQNPNPLEPGPRARKRRRRKRFFTEINANPAFPRNRRNSVGKELDSEAITAMSVGFPVNSLTEEEIEANVVSIIGGKEQANYIVVRNHIIALWRSNVSNWLTRDHALESIRLEHKTLVDTAYKFLLEHGYINFGLAPVIKEAKLRSFDGLEPPNVVVVGAGLAGLVAARQLLSMGFRVLVLEGRDRPGGRVKTRKMRGGDGVEAMADVGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPSGELVDVGVDSKIEASFNKLLDRVCKLRQSMIEEIKSVDVPLGEALETFRLVYGVAEDQEERMLFDWHLANLEYANATLLGNLSMAYWDQDDPYEMGGDHCFIPGGNETFVHALAENLPVFYGNVVESIRYGSDGVVVYAGDKEFSCDMALCTVPLGVLKKGGIGFVPELPEKKKEAIQRLGYGLLNKVAMLFPYNFWGEEIDTFGRLTEDSSTRGEFFLFYSYSSVSGGPLLVALVAGDAAERFETMSPTDSVKRVLQILRGIYHPKGIVVPDPVQALCSRWGQDKFSYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNKQYPATMHGAFLSGMREAANILRVARRRASESASNLAK