Information report for BnaA09G0082600ZS
Gene Details
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Functional Annotation
- RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.
Homologous
- Actinidia chinensis: CEY00_Acc26765, CEY00_Acc22022
- Brassica oleracea: Bo9g017510, Bo3g104750
- Brassica rapa: Bra035858, Bra038607
- Citrullus lanatus: Cla97C06G126980
- Cucumis sativus: CsGy1G001130
- Lactuca sativa: gene-LSAT_5X15800
- Prunus persica: PRUPE_5G167200
- Rosa chinensis: RchiOBHm_Chr7g0192801
Gene Resources
- Pfam: PF00850
- UniProt: A0A078FUS7
- RefSeq: XP_013658027.1
- EMBL: HG994363 , LK032067
- AlphaFoldDB: A0A078FUS7
- KEGG: bna:106362718
- OMA: NIPLMMV
- InterPro: IPR000286 , IPR003084 , IPR023696 , IPR023801 , IPR037138 , IPR050284
- PANTHER: PTHR10625 , PTHR10625:SF16
- SUPFAM: SSF52768
- Gene3D: 3.40.800.20
- OrthoDB: A0A078FUS7
- SMR: A0A078FUS7
- CDD: cd09991
- STRING: 3708.A0A078FUS7
Sequences
gDNA Sequence
- >BnaA09G0082600ZS
CAAATTCTCCATTGGCCTGGATCGACGTGAAGCGTATAGTCTGGACCGAAATACTCAAAGTACTCATTGTACGGGAGCTTATTGTCCGGCTCTACTCCAACCGCAACTGCAGTCTGCAACAAGTCAACAGAAAAAAAACTTTCAAGAACAATATGTTTACCAACAAGTATAGAAGTGAAAGAGAGATGAAAAGACCTCATAACACCAGCAACGGGCAACATTTCGTATAGTATACCCTCCACCACCCAAGACCATGAGAGGAACGTTGAAAGATCTCAAGAACCGGAGGCAATCAGCATGACCCTTGACTGATAAGTTAAAGCAACCCAAACGATCACCGCTTAACGAGTCAGCCCCGCACTGAAGAACGACTGCCTCTGGCTGATACACGTCCATAACCTTCTGGATAAGAGGTCTAAACATGCTGCGGAAACTCTCATCGTCCATACCATCGTTTAATGGAACATTTAGAGCGTAGTATTTCCCTTTCTCAGCGCCAATGTCTCTAATGTGACCAGTTCCTGGGAAAAAGTCTCCGAACTTGTGAAAAGAAACTGTCATAACTCTGTCGGTGGTGTAAAACGCTTCTTCTACTCCATCTCCATGGTGCACATCGATATCAACGTAGAGAACTCGCTGCAAACGAAATTTGATGAAAGCATATTAGGAACGTAAGCAATGGAAAACACCATCTTAACCTTTCGAACAGTGTACTATCAAGATAGAGTAACAAAGAAACCGAATCAAAACTAAAGAAACACAAGTAAGAAACTTAAAGAATCAGACGGTGGAAAACAGTCTAATGCAAGCACAATTATCAAACAAAACCAAATATCATTTGGCCACTGAAACACTCAAAGGATCATGCAGGTTGCAGCTGCATTTCACAGAAACATCTGGTGCACTTGAACTACATGATAATGCAAGATTCTAAAGGAGCACTCGCTGCAAACGAAATATTAGGAATGCAAGCAATGGAAACATCATCTTAACCCTTCGAACAATGTGCTTAGAATAACAAACTAACTGAATCCAAATATAATGAAACATAAAGTAAGAAACTTTAATAATCAGACGGTGTTAACACTGAAGGGGATCATGTAAGTTGCAGCTGTATATTCTCAAAGCATAAAGCATGAATCAAGCAATTACCCTAAACATCTGCAACTTAAAGCACTTAACCTTAAACCCTTTTTCAATTCCTCTATGAACAGAAACGAGTTAGAGCATTTTACCCTAAACATCTTAAGCAACTCGAGAATCCCCAAAACGATGTCGTTCACATAGCAAAACCCAGAGGCTTCACTCTTCTTAGCATGGTGAAGCCCACCGCCCCAATTAATCGCAATATCCGCATCCTGCCGGTTCAACTTAACCGCAGCGCCAATCGAGCCTCCGGCGGAAGCGCGGCAGAAGTCGAAAAGCCCGTCGAAGACGGGACAATCCTCTCCGACGTTGAATCGCCTCAGGTTCCGCGCGGCGGAGTGATCGCCCATGGACTCCGGCGAGACGGAGCGGAGGAAATCGACGTAGTCCGGGGAATGGAACTGGCCGATGTCGGAGGCGTCGGCGAGGTTAGGGCGGCTGATCTCGAGGCGACGGTGGAGGTTGTAGTGTACGATGAGGCTGTGAGCCATACGGATCCGGTGAGGCTTCATCGGGTGTCCTTGGCCGTAGTAGTAGTCGCCGATCGTTGGCTCGTAGAAGTAGCTGACTCGACGCTTGCGGCCGTCGGGACCTGACGGCAATGATACGCCGCTCTCGTCTGTCTCCAT
CDS Sequence
- >BnaA09G0082600ZS
ATGGAGACAGACGAGAGCGGCGTATCATTGCCGTCAGGTCCCGACGGCCGCAAGCGTCGAGTCAGCTACTTCTACGAGCCAACGATCGGCGACTACTACTACGGCCAAGGACACCCGATGAAGCCTCACCGGATCCGTATGGCTCACAGCCTCATCGTACACTACAACCTCCACCGTCGCCTCGAGATCAGCCGCCCTAACCTCGCCGACGCCTCCGACATCGGCCAGTTCCATTCCCCGGACTACGTCGATTTCCTCCGCTCCGTCTCGCCGGAGTCCATGGGCGATCACTCCGCCGCGCGGAACCTGAGGCGATTCAACGTCGGAGAGGATTGTCCCGTCTTCGACGGGCTTTTCGACTTCTGCCGCGCTTCCGCCGGAGGCTCGATTGGCGCTGCGGTTAAGTTGAACCGGCAGGATGCGGATATTGCGATTAATTGGGGCGGTGGGCTTCACCATGCTAAGAAGAGTGAAGCCTCTGGGTTTTGCTATGTGAACGACATCGTTTTGGGGATTCTCGAGTTGCTTAAGATGTTTAGGCGAGTTCTCTACGTTGATATCGATGTGCACCATGGAGATGGAGTAGAAGAAGCGTTTTACACCACCGACAGAGTTATGACAGTTTCTTTTCACAAGTTCGGAGACTTTTTCCCAGGAACTGGTCACATTAGAGACATTGGCGCTGAGAAAGGGAAATACTACGCTCTAAATGTTCCATTAAACGATGGTATGGACGATGAGAGTTTCCGCAGCATGTTTAGACCTCTTATCCAGAAGGTTATGGACGTGTATCAGCCAGAGGCAGTCGTTCTTCAGTGCGGGGCTGACTCGTTAAGCGGTGATCGTTTGGGTTGCTTTAACTTATCAGTCAAGGGTCATGCTGATTGCCTCCGGTTCTTGAGATCTTTCAACGTTCCTCTCATGGTCTTGGGTGGTGGAGGGTATACTATACGAAATGTTGCCCGTTGCTGGTGTTATGAGACTGCAGTTGCGGTTGGAGTAGAGCCGGACAATAAGCTCCCGTACAATGAGTACTTTGAGTATTTCGGTCCAGACTATACGCTTCACGTCGATCCAGGCCAATGGAGAATTTGA
Protein Sequence
- >BnaA09G0082600ZS
METDESGVSLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPNLADASDIGQFHSPDYVDFLRSVSPESMGDHSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDIGAEKGKYYALNVPLNDGMDDESFRSMFRPLIQKVMDVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPGQWRI