Gene Details:
- Gene ID: BnaA09G0082500ZS
- Suggest Gene Name: HISTONE DEACETYLASE 6, RNA-MEDIATED TRANSCRIPTIONAL SILENCING 1
- Description: putative flowering gene
- Species: Brassica napus
- Source: Putative flowering gene from PlantCFG
Protein Features:
- Pfam: PF00850
Functional Descriptions:
- RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.
Homologous
- Arabidopsis thaliana — AT5G63110
Sequences:
gDNA Sequence
- >BnaA09G0082500ZS
CACTTCAGGCTCATCTTCCATATCATCTTCACCAGTAGAGTCCCTGAAGATTCAAAGAGTTTTAAATTTAAGTTCTCAAGGCATCAAAGGTTTGGTTAGATTGAAGTAGGAAAAAGCTTTTTTAATTACCTGTCCATAGGTGGGTCATTAATACCCGAGTAACCAACAAGAGGTGGTGATTTCTCATCATCGTCACTGTCTGATTCATAATTCGCAGTTCCACTCCAATCCGAGGCTTTGGTCTTTCCTCCAAGTCTTCTTCCGGCTAAAAAGATTAGAGAGACAAACAAAATATATCTAATGAGTCTGTCCCCAATAGAGAGCATGAGAGAGAGATATATACATCAATGGATGATTGAATTTTTTACCTCATCCAAAACTCTATTCACTGGAGGTGTGTGCTGAAACTGCACGCTAGGTGCGTGTATTAGTCCCGAAAGTTGCTCTAGCAATGTGTTCCTGAAAAATTCAAAAGTTTAACTTCACCAAGTTCAAAGATCCCATTGACAAGCCAAGGAGATTCACAAGCCACAAGCTATGAGGATGTAAGCAAAAGATAGAATCCTAAGTTGCATTGAGAGCATGCAGGAGTTCCTCGAATTGCATTAATCATAAGAAGGGGTAGCAGGAGATGTTACCTTATCTTCTCCAT
CDS Sequence
- >BnaA09G0082500ZS
ATGGAGAAGATAAGGAACACATTGCTAGAGCAACTTTCGGGACTAATACACGCACCTAGCGTGCAGTTTCAGCACACACCTCCAGTGAATAGAGTTTTGGATGAGCCGGAAGAAGACTTGGAGGAAAGACCAAAGCCTCGGATTGGAGTGGAACTGCGAATTATGAATCAGACAGTGACGATGATGAGAAATCACCACCTCTTGTTGGTTACTCGGGTATTAATGACCCACCTATGGACAGGGACTCTACTGGTGAAGATGATATGGAAGATGAGCCTGAAGTGA
Protein Sequence
- >BnaA09G0082500ZS
MEKIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPEEDLEERPKPRIGVELRIMNQTVTMMRNHHLLLVTRVLMTHLWTGTLLVKMIWKMSLK