Gene Details:
- Gene ID: BnaA08G0242600ZS
- Suggest Gene Name: CHB4, SWI3C, SWITCH/SUCROSE NONFERMENTING 3C
- Description: putative flowering gene
- Species: Brassica napus
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).
Homologous
- Arabidopsis thaliana — AT1G21700
Sequences:
gDNA Sequence
- >BnaA08G0242600ZS
AGAAAGAAGATTTGCTGTTGCTGCTCGGAAGCTGGAAACTAGAGAGAGACTCGGAGCATAGAAGAAGAGAGGAAAAGGAAAGCCATTCGACTACTTTAAGCTCTCTTCGCTTCTTAAGGCTCAATTCAATTCTCACGAATCAGAGACCAGATAAAAAAAATGCCAGCTACTGAAGGTAAAATTGCATAAAGGAACTCTCTTTCCATCTCAAAATCCGATTTTGGATTGGGATTTGAATTACCCATGTAGATCGTATCAATGGGTAATGACTCGATTCTCCGCTCTTTCGCAGATAGAAGAGGGAAATGGAAACGGCGGAGGCGAGGCGGGAGGAGACCTAAGCAAGAGGAGGAAGACATCGAGGAAGAAGACGATGAGGAGATGGAGGAAGCTGATAATAATGCCGACGAGCTTCACCAAAACGGCGCCGCAGCACCCGATCCAGGACCAGGTACTAGCGAGGTAGTTGAAGATAGCGGTGAGCGCATCTCTGGTTTCCCTTCTGTGGTGAGGCGCGTTGTGACACGCCCTCACGCGTCTGTGACGGCTGTTGTGGCGGCTGAGAGGGGGTGTTTGAGAGGGGAGGTTAAAGGGCAGGGCTTGTTGCTTCCTTCTCTGGAGAATATTTCGTTTGGGCAGTTGCAGGCGTTGTCTTGTGTACCGGCTGATTCTTTGTGCTTTGATCCTGAGAGGAGTGATGGAGCGTTGTCTTATGTTATCTCTCCACCCTCTATTATGGAAGGAGAAGGTGTTGTTAAACGGTTTGGGGATAAAGTTCATGTCTTGCCTATGCATTCAGGTTTGTTTCGTTCTTAGTGTCCTTCAACTCATGAATTTGCATATAAGTTGATGACATGTATAGGCTTGTTGTCCTAGATGAAGTTCTTATCTTTGTTTTATCTAGTTTCTGCTTCCTGGTTTATGTTACTCTGGTTTGGAGCAGTCCTATGTTGGCTTATGTTATGTTGCACTTTGAATGGATTACGCAAAGTGATGTCCTTCTAAGTTTCACTTAGGCTATGTTCTTGTAGTCATGTAGCTCAGATGTATCCTGTTTTCCTTCTTAATCTTTTATTTTCTGATCATTTTGTTTCTGTTTGAGCAGATTGGTTTGCACCAAACACAGTGGATCGCCTTGAAAGGCAAGTGGTGCCACAGTACTTCTGTGGAAAATCGCCAAACCATACACCAGAAAGTTATATGCGATTCAGGAACGCCATTGTTTTGAAATATGTGGATAACCCTGAGAAGACACTGACGATTTCTGATTGCCAAGGATTGGTAGATGGTGTTGACGCTGAAGATCTTGCACGAGTTTTCCGTTTTCTTGACCACTGGGGGATAATCAATTACTGTGCCACTTACCAGTGTCACCCTGGGCCTTCTAAGGGTGTGTCAGATGTTAGGGAGGATGCAAATGGTGAGGTCCATGTACTGTCTGCTGCTTTGACATCTATTGATAGTTTGATCAGATTTGATAAGCCCATCTGTAGACACAAGGCAGATGAAGTCAGTTCATCCTTGCCGTCTTCGGATGTTGACCTCCCTGACTTAGACATCAGGATTCGTGAACACCTATGCGAGAACCACTGCAACCATTGTTCTCGCCCGCTTCCAACTGTGTACTTCCAATCACAAAAGAAGGTTCTTATCATGTTTCCTCTACCTAAAGTTCTTTGTGTTTCATTATCTGATGCAATAGACTCACAAACCTTATCTCTACATTTCAGGAGGATGTACTCTTATGCTCTGATTGTTTTCACGATGCAAAATTTGTGGTTGGACATTCTTGTATTGACTTTGTAAGAGTGGATACAAGCAAAGATTACAGGGATCAAGATGGAGAGAATTGGAGTGATCAAGAAACTCTCTTGCTTCTTGAAGCTGTGGAGCTCTACAATGAAAACTGGGTTCAGATTGCGGACCATGTCGGTTCCAAATCAAAAGCTCAGTGTATTCTTCATTTTCTTCGGTTACCTGTGGAGGATGGTCTTTTGGATAATGTTGAGCTTCCAGGTGTTACTGATCCGGCAAACCCTACAAATGGATATGATCACAGAGGAGGAGCTTCAAATGGGGCTTTACCTGGTGATTCTGTTTACTTCGTCTCCAACTGTAAATTATTGGCCGTGATTATGTTCTTTGACATGCCATTCTCATTGTCCACTTACTTTTGCAGGAACTTCTGAGCAAGATTCTGACACTGAGATCAATCTTCCTTTTGTGAAGTCTCCCAATCCGGTTATGGCATTGGTATGTGATTTTTTTCTGCTGCAGAATTATACACATAACTTTCCCGTATCATCTCACCAGTTAGATATATATAATGAATCGATTGATCTGAAACCTATATTGTGCGCATAATTAAGAGTGAAAAATGATCTTCTCTGAGTCTGGAATATGATGATCCTGCTACCAAAACATTTTAGGTTGCATTTTTGGCATCAGCTGTTGGACCTAGAGTTGCTGCGTCCTGTGCCCATGAGTGCCTCACGGTTCTCTCTGCGGATGATAGGTTAGTAGTGTATATCGTCTTCACTATACATTTTCTTAGTCTGTGGTAGCTTTCATTCATCTTCTTTGTTATACATCTTATATATTCTGAGTATTTTTAATCTATCAAGGTTGAAATCTGATGGCCTGCAAGGAAAAAACCCCACCATGCTTGATGGAGAAAATCAGCAGCTAGATGGTATGGCATGTTTCTTGATTGTTGTCTTTATTGTATTGTTCGTCTCCTTCGTTTTGAACCTAATACCTGTCTCCTTTGATGAAAAAAGATAACTCGGGAGCACAGAAAACATCCTGCCAAAACGGAGCAGAAGCACCGACTCCACTGCCACAGGACAAGGTTATGGCTGCATTTAAAGCCGGACTATCAGCTGCATCGACAAAAGCAAAATTGTTTGCTGATCATGAGGAACGTGAAATCCAAAGACTTTCTGCAAATATTGTAAATCACCAGGTATGTAGCAGAACATAGTTGCTGTTGATAATTTGTATGGTTGATTTGTTTTGTTTTGTCGATAGTGTTTTGCTGATATGAGTAAAAAACTTTTAAATCATCCCACAGTTGAAGAGGATGGAGCTGAAGCTAAAGCAGTTTGCAGAAATAGAAACGTTGTTGATGAAAGAATGCGAACAAGTAGAGAAAACCCGTCAGAGATTTGCTGCAGAACGAGCACGTATGCTCTCAGCAAGATTTGGATCAGCTGGAGGAATCGCCCCACAGGCTAATAGTAATAATCTCCAAGGCATGTCTCTATCCACAGGTGGTGGTAACAGCATCAATACCCTCCTGCAGCAACAACTACAACAACAGCAAGTTTCAGCTGGCTCTTCTCAACCAAGCATGATCCCTGGATTCAGCAACAACCCACAAGTTCATGCGCAGATGCAGTTCATGGCGCGCCAACAACAACAACAAGCGTTCTCCTTTGGCCCGAGATTGCCTCTCAATGCGATACAGACGAATGCAGGATCAACGGCTTCACCAAATGTCATGTTTGGACTTAATAACCCTGCAGGTGGAGCAGCAGCTTCCATCAACCAGACTTCGTTTAGCAACCCGATGGTTAGGTCTTCCACGGGTTCTGGATCCGGGTCCGGCTTAGGCTTAAACTAAGACGCCATCTCTTTAGCTTATGTAGCCTATCAGTTTCCAAAATTATTTTGAGCCAAGTTATTGCTTTGAGACCGTAGTGAGTGTTGTTATATGTTAGGTATCATAATTTTCGGTAATTATCATTGTGAATCTAAAACATTTACAAAAACATCTGTTTCTTGTCTCTAATTGGTCTTGGCATATCACGAACATTATAAAAATCATGTCTTTTTG
CDS Sequence
- >BnaA08G0242600ZS
ATGCCAGCTACTGAAGATAGAAGAGGGAAATGGAAACGGCGGAGGCGAGGCGGGAGGAGACCTAAGCAAGAGGAGGAAGACATCGAGGAAGAAGACGATGAGGAGATGGAGGAAGCTGATAATAATGCCGACGAGCTTCACCAAAACGGCGCCGCAGCACCCGATCCAGGACCAGGTACTAGCGAGGTAGTTGAAGATAGCGGTGAGCGCATCTCTGGTTTCCCTTCTGTGGTGAGGCGCGTTGTGACACGCCCTCACGCGTCTGTGACGGCTGTTGTGGCGGCTGAGAGGGGGTGTTTGAGAGGGGAGGTTAAAGGGCAGGGCTTGTTGCTTCCTTCTCTGGAGAATATTTCGTTTGGGCAGTTGCAGGCGTTGTCTTGTGTACCGGCTGATTCTTTGTGCTTTGATCCTGAGAGGAGTGATGGAGCGTTGTCTTATGTTATCTCTCCACCCTCTATTATGGAAGGAGAAGGTGTTGTTAAACGGTTTGGGGATAAAGTTCATGTCTTGCCTATGCATTCAGATTGGTTTGCACCAAACACAGTGGATCGCCTTGAAAGGCAAGTGGTGCCACAGTACTTCTGTGGAAAATCGCCAAACCATACACCAGAAAGTTATATGCGATTCAGGAACGCCATTGTTTTGAAATATGTGGATAACCCTGAGAAGACACTGACGATTTCTGATTGCCAAGGATTGGTAGATGGTGTTGACGCTGAAGATCTTGCACGAGTTTTCCGTTTTCTTGACCACTGGGGGATAATCAATTACTGTGCCACTTACCAGTGTCACCCTGGGCCTTCTAAGGGTGTGTCAGATGTTAGGGAGGATGCAAATGGTGAGGTCCATGTACTGTCTGCTGCTTTGACATCTATTGATAGTTTGATCAGATTTGATAAGCCCATCTGTAGACACAAGGCAGATGAAGTCAGTTCATCCTTGCCGTCTTCGGATGTTGACCTCCCTGACTTAGACATCAGGATTCGTGAACACCTATGCGAGAACCACTGCAACCATTGTTCTCGCCCGCTTCCAACTGTGTACTTCCAATCACAAAAGAAGGAGGATGTACTCTTATGCTCTGATTGTTTTCACGATGCAAAATTTGTGGTTGGACATTCTTGTATTGACTTTGTAAGAGTGGATACAAGCAAAGATTACAGGGATCAAGATGGAGAGAATTGGAGTGATCAAGAAACTCTCTTGCTTCTTGAAGCTGTGGAGCTCTACAATGAAAACTGGGTTCAGATTGCGGACCATGTCGGTTCCAAATCAAAAGCTCAGTGTATTCTTCATTTTCTTCGGTTACCTGTGGAGGATGGTCTTTTGGATAATGTTGAGCTTCCAGGTGTTACTGATCCGGCAAACCCTACAAATGGATATGATCACAGAGGAGGAGCTTCAAATGGGGCTTTACCTGGAACTTCTGAGCAAGATTCTGACACTGAGATCAATCTTCCTTTTGTGAAGTCTCCCAATCCGGTTATGGCATTGGTTGCATTTTTGGCATCAGCTGTTGGACCTAGAGTTGCTGCGTCCTGTGCCCATGAGTGCCTCACGGTTCTCTCTGCGGATGATAGGTTGAAATCTGATGGCCTGCAAGGAAAAAACCCCACCATGCTTGATGGAGAAAATCAGCAGCTAGATGATAACTCGGGAGCACAGAAAACATCCTGCCAAAACGGAGCAGAAGCACCGACTCCACTGCCACAGGACAAGGTTATGGCTGCATTTAAAGCCGGACTATCAGCTGCATCGACAAAAGCAAAATTGTTTGCTGATCATGAGGAACGTGAAATCCAAAGACTTTCTGCAAATATTGTAAATCACCAGTTGAAGAGGATGGAGCTGAAGCTAAAGCAGTTTGCAGAAATAGAAACGTTGTTGATGAAAGAATGCGAACAAGTAGAGAAAACCCGTCAGAGATTTGCTGCAGAACGAGCACGTATGCTCTCAGCAAGATTTGGATCAGCTGGAGGAATCGCCCCACAGGCTAATAGTAATAATCTCCAAGGCATGTCTCTATCCACAGGTGGTGGTAACAGCATCAATACCCTCCTGCAGCAACAACTACAACAACAGCAAGTTTCAGCTGGCTCTTCTCAACCAAGCATGATCCCTGGATTCAGCAACAACCCACAAGTTCATGCGCAGATGCAGTTCATGGCGCGCCAACAACAACAACAAGCGTTCTCCTTTGGCCCGAGATTGCCTCTCAATGCGATACAGACGAATGCAGGATCAACGGCTTCACCAAATGTCATGTTTGGACTTAATAACCCTGCAGGTGGAGCAGCAGCTTCCATCAACCAGACTTCGTTTAGCAACCCGATGGTTAGGTCTTCCACGGGTTCTGGATCCGGGTCCGGCTTAGGCTTAAACTAA
Protein Sequence
- >BnaA08G0242600ZS
MPATEDRRGKWKRRRRGGRRPKQEEEDIEEEDDEEMEEADNNADELHQNGAAAPDPGPGTSEVVEDSGERISGFPSVVRRVVTRPHASVTAVVAAERGCLRGEVKGQGLLLPSLENISFGQLQALSCVPADSLCFDPERSDGALSYVISPPSIMEGEGVVKRFGDKVHVLPMHSDWFAPNTVDRLERQVVPQYFCGKSPNHTPESYMRFRNAIVLKYVDNPEKTLTISDCQGLVDGVDAEDLARVFRFLDHWGIINYCATYQCHPGPSKGVSDVREDANGEVHVLSAALTSIDSLIRFDKPICRHKADEVSSSLPSSDVDLPDLDIRIREHLCENHCNHCSRPLPTVYFQSQKKEDVLLCSDCFHDAKFVVGHSCIDFVRVDTSKDYRDQDGENWSDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVELPGVTDPANPTNGYDHRGGASNGALPGTSEQDSDTEINLPFVKSPNPVMALVAFLASAVGPRVAASCAHECLTVLSADDRLKSDGLQGKNPTMLDGENQQLDDNSGAQKTSCQNGAEAPTPLPQDKVMAAFKAGLSAASTKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQVEKTRQRFAAERARMLSARFGSAGGIAPQANSNNLQGMSLSTGGGNSINTLLQQQLQQQQVSAGSSQPSMIPGFSNNPQVHAQMQFMARQQQQQAFSFGPRLPLNAIQTNAGSTASPNVMFGLNNPAGGAAASINQTSFSNPMVRSSTGSGSGSGLGLN