Gene Details:

  • Gene ID: BnaA06G0406800ZS
  • Suggest Gene Name: VERNALIZATION INSENSITIVE 3
  • Description: putative flowering gene
  • Species: Brassica napus
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization.

Homologous

Sequences:

gDNA Sequence
  • >BnaA06G0406800ZS
    AGTTTTGCGCTATACATTAGAAGGAAGCAAAGTTACATTAAGATATCGTTATGGTTTTTAGAATATTAAGAAAATTGAGAGAGATTTCAAGAGATTTTAATGCCAGAGCTTGAGGCAGATTCCAGCAGGTACAACACCACTTGCTGATGATCTCTTGTTGAGTGTGCAATCTGAGAATGTATGCATAAGCTGTTGTCCCAAAGAGGGCAGATCATCCATGAATGTCTCGATAAAAAGCTTCACAACTCTAACTTCACGATGAGTAGCTCTTAAGCTATACCATGTCAAGAACCTTTTCCGGAAACTCTTGTCTATATGCCCTTCTTGCTCTAAGCATCTGATGGTCTTGACGACGTGAACCAAGTCATTATCTCCTCCAAATCCATTTGCTACATTGGTCTCAGGTTTCTCGTTCACGGTTGCTGTTCTTGATTTGGATCTTTTGTTCCCTTCTTGCTTGCCCTTATAAGCATCTCTTCGGCAGGGTGTTACAACAAGCAACTCTCTTCCCTCTGGCTCGTTAACTTTCCTTTTTATGAGCCTCTCGTCTTCAAGCTCAGATTCTACTTCAATGTTGTCATTGTCCCCATTTTCTTTGCAGCAGCGTATAAGGGCATTGTTAAATTCATCTTCCGGTAAAGATGGATTACTGCAAAGACCACTGCTAGAGTTAATCAATAGGCTTTGCATGTTCCCAGCTTCATCTTCATCACCCTCCACCCCAGTGGTCTGGTTTTGTGAGGAAGACGGCTCCTCGGAGTCTAATATCACAGTGACTGATCTTGCTTGAACCTCTTCCACTCTCACGCTCAACTTGTCACCTAACGAGAACTAAAGTCAACATCTTCTGACTCCAAAACATAAGTACAATGTGTGAACAGAAAACTAACCTTGTCCTGAAACAGATTCTGATGGTGGTGAGACCATTTTGTCCAAAGCTTCCATTGCCAGAGAACACAGCTTTTGAACTTGAGTTCCCGAAGATAGACTTTGGACGATACCACGAGCCATCTTCATCGCGCAACCCGATAACGGACCCACATCACCCTCCAGCTTCTTCACCGCCTCGTCCATGAGTTCCAACAGATATCGATACTTCCTCGTACCTCTCAGCAGCTTCTGTCCTAAAGAAACACGGTAGCAAAGAACATCCACACGTTGAGTCTCTTTCGCCACCTTCACTTGTTGCCTCCAGCATCTGTAAGTACACACACATAATATTACATTACACATCCTCCAAACGATCTACGTTCATTGTGTATATCCATCGATTCTTACCCGAGTAAGTCATTATCTTTGCCGCAAAACACGCAATAAAACCTACCATCAAGCGCTCTTCCTACTTCATCATCATCACACCCAATCCCATACCTCTCTTGCTCCAAAGCGCATTCTAAATGACAAGACACTCCACAAGCCTCACAAGTAATCCATAGACTCGGATCTTTATCTTCATCATAGTTCTGACAAACGCAGCAAGAACACTTCCTGCAAAAGGTATCCTCGGTTCCAAGCGCAGCTCTACAAGCTACATTCTCGCAGCAAATGATGTAACTGGTCGTCTTCCGTTTCTTTTTCGAGTTTTTACGGTCAGGACGAGAGGTTTCTCCGAGAGGACGAGACACAAGTTTGAGTAGGGTTTCTATGAGTTTTGGTTTGGCTAGACCAGTGTACTTCCTCTCTTTCCCCATCTCTGCACATATGATCTTCATTATCTCATCTCGGCTCCATGAGTTTAAAAGCTCTGAAGCTTCTTCTGGCTGCTTGGACAATGCGTGGATCAGTTCCCTCCTCTCGCTTACACTCAAACCTTTCTTTTTGGGAAAGTCAGCGCACGTAACACCTGCAAAAGCCAAAAGCACAATCCTCTAACCCTAAAATCTCTTCAACATAATCGTATTGCCAAGTATAAATGAATAAGAATAACAAAAAAAAAAGTTATTATGACATGTTTGGGTAAAATTTATTCACAATTTGTCAAGAACAACCAATATATTCACAATGGCGATGAATCAATAAGCGTATACGATCATGTTTCAACAGTTCTGATGAATTAAAACGACGTCGCGTTAATGACCTAAAAGCATATAAACGCGTCGAACTAGAACAATGAGAAGACAAAAAGACATTCACGCCGACAAGAAGAAAGAAGATGACGTACCTTGAAATGAAGAAGGATCTATGTCTTCTGGACCCACAGTACTATCAAAACGCCAATTCTTTGAGAGCTGCAGATCAGATTTCAGACAAACACGAAGACAAAAGTTAAAAAGATTCTATGGAAAAGAAGCATGTAAAACATGTACTCACGCTCCGCAAGAACAAAAGAGATCGATAAAGCTCAGATTTTATTTTCCAATTTTTTTTTTTCAAAATTAGAAGTTTAAACAACCAAAAGGAAAACCCCATGAAGCTCTATTTGTCTTAATGTGTATGTATAAGACAAGGGATTCGAGGAGGACACGGTCGTTAAGCTCTAGGAAGAACAAAACATTGAGAATTTTTGTGAATTAAAAAATAAATACCAGAAAACTAAAAAACTAAAATAAAAGTAAATAAAATGAGGATTGGTTCGTTGTTTCACCGAATGAAAAACTTCCAACAACAACATCGAACAAAGAGAAGCTATTTACCGAAGCAGCTTGCAT
CDS Sequence
  • >BnaA06G0406800ZS
    ATGCAAGCTGCTTCGCTCTCAAAGAATTGGCGTTTTGATAGTACTGTGGGTCCAGAAGACATAGATCCTTCTTCATTTCAAGGTGTTACGTGCGCTGACTTTCCCAAAAAGAAAGGTTTGAGTGTAAGCGAGAGGAGGGAACTGATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCAGAGCTTTTAAACTCATGGAGCCGAGATGAGATAATGAAGATCATATGTGCAGAGATGGGGAAAGAGAGGAAGTACACTGGTCTAGCCAAACCAAAACTCATAGAAACCCTACTCAAACTTGTGTCTCGTCCTCTCGGAGAAACCTCTCGTCCTGACCGTAAAAACTCGAAAAAGAAACGGAAGACGACCAGTTACATCATTTGCTGCGAGAATGTAGCTTGTAGAGCTGCGCTTGGAACCGAGGATACCTTTTGCAGGAAGTGTTCTTGCTGCGTTTGTCAGAACTATGATGAAGATAAAGATCCGAGTCTATGGATTACTTGTGAGGCTTGTGGAGTGTCTTGTCATTTAGAATGCGCTTTGGAGCAAGAGAGGTATGGGATTGGGTGTGATGATGATGAAGTAGGAAGAGCGCTTGATGGTAGGTTTTATTGCGTGTTTTGCGGCAAAGATAATGACTTACTCGGATGCTGGAGGCAACAAGTGAAGGTGGCGAAAGAGACTCAACGTGTGGATGTTCTTTGCTACCGTGTTTCTTTAGGACAGAAGCTGCTGAGAGGTACGAGGAAGTATCGATATCTGTTGGAACTCATGGACGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTATCGGGTTGCGCGATGAAGATGGCTCGTGGTATCGTCCAAAGTCTATCTTCGGGAACTCAAGTTCAAAAGCTGTGTTCTCTGGCAATGGAAGCTTTGGACAAAATGGTCTCACCACCATCAGAATCTGTTTCAGGACAAGGTGACAAGTTGAGCGTGAGAGTGGAAGAGGTTCAAGCAAGATCAGTCACTGTGATATTAGACTCCGAGGAGCCGTCTTCCTCACAAAACCAGACCACTGGGGTGGAGGGTGATGAAGATGAAGCTGGGAACATGCAAAGCCTATTGATTAACTCTAGCAGTGGTCTTTGCAGTAATCCATCTTTACCGGAAGATGAATTTAACAATGCCCTTATACGCTGCTGCAAAGAAAATGGGGACAATGACAACATTGAAGTAGAATCTGAGCTTGAAGACGAGAGGCTCATAAAAAGGAAAGTTAACGAGCCAGAGGGAAGAGAGTTGCTTGTTGTAACACCCTGCCGAAGAGATGCTTATAAGGGCAAGCAAGAAGGGAACAAAAGATCCAAATCAAGAACAGCAACCGTGAACGAGAAACCTGAGACCAATGTAGCAAATGGATTTGGAGGAGATAATGACTTGGTTCACGTCGTCAAGACCATCAGATGCTTAGAGCAAGAAGGGCATATAGACAAGAGTTTCCGGAAAAGGTTCTTGACATGGTATAGCTTAAGAGCTACTCATCGTGAAGTTAGAGTTGTGAAGCTTTTTATCGAGACATTCATGGATGATCTGCCCTCTTTGGGACAACAGCTTATGCATACATTCTCAGATTGCACACTCAACAAGAGATCATCAGCAAGTGGTGTTGTACCTGCTGGAATCTGCCTCAAGCTCTGGCATTAA
Protein Sequence
  • >BnaA06G0406800ZS
    MQAASLSKNWRFDSTVGPEDIDPSSFQGVTCADFPKKKGLSVSERRELIHALSKQPEEASELLNSWSRDEIMKIICAEMGKERKYTGLAKPKLIETLLKLVSRPLGETSRPDRKNSKKKRKTTSYIICCENVACRAALGTEDTFCRKCSCCVCQNYDEDKDPSLWITCEACGVSCHLECALEQERYGIGCDDDEVGRALDGRFYCVFCGKDNDLLGCWRQQVKVAKETQRVDVLCYRVSLGQKLLRGTRKYRYLLELMDEAVKKLEGDVGPLSGCAMKMARGIVQSLSSGTQVQKLCSLAMEALDKMVSPPSESVSGQGDKLSVRVEEVQARSVTVILDSEEPSSSQNQTTGVEGDEDEAGNMQSLLINSSSGLCSNPSLPEDEFNNALIRCCKENGDNDNIEVESELEDERLIKRKVNEPEGRELLVVTPCRRDAYKGKQEGNKRSKSRTATVNEKPETNVANGFGGDNDLVHVVKTIRCLEQEGHIDKSFRKRFLTWYSLRATHREVRVVKLFIETFMDDLPSLGQQLMHTFSDCTLNKRSSASGVVPAGICLKLWH