Gene Details:
- Gene ID: BnaA06G0290900ZS
- Suggest Gene Name: ALTERED EXPRESSION OF APX2 8
- Description: putative flowering gene
- Species: Brassica napus
- Source: Putative flowering gene from PlantCFG
Protein Features:
- Pfam: PF00459
Functional Descriptions:
- Encodes a bifunctional protein that has 3’(2’),5’-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3’(2’),5’-bisphosphate nucleotidase activity.
Homologous
- Arabidopsis thaliana — AT5G63980
Sequences:
gDNA Sequence
- >BnaA06G0290900ZS
TGTCATCTATAAATTGCTTTCGAACAGCAAAGGCACCGCTTCACACATTCGCATCAGTTTCGAGATTCAGATATTCACCGAACCCTATCGTTTCTGTATTGAGAAGGAAGTCGTCTCCTTCGTTTGTTACTCTAAGAGTAGTCTCATCCATGGCTTACGAGAAAGAGCTTGACGCTGCTAAGAAAGCTGCTTCCCTCGCAGCTCGTCTCTGTCAGGTCTCTTTTTCTTGATTCAATCATGACCCAGATTCTAAAGTTTGATTCTTTTCGAAAACCCATTTTGTAATCTTCCCAATTTCGATTCGAATTTCTCTAAAAGAATGTGTTTTTATTTTATTTGGTTTGTTTCAGAAAGTTCAAAAGGCTTTGTTGCAATCGGATGTTCAATCAAAATCTGATAAAAGTCCAGTCACCGTTGCTGATTATGGTTAGTTTTTACAAGTAACACTGTCTTTGTTGTATCTCTAGTGTAATGAAGCTGACCTTGTTTTTGAGTTTTCAGGTTCACAAGCAGTTGTTAGCTTAGTCTTGGAAAGGGAACTCACTTCTGAACCCTTTTCATTGGTCGCTGAAGAGGTGAGTATGTCTCTCTCACAAATACTTATCTTGATTATTTATGTTTTGATGACTCACATTGTCTTTTAAATAATGTTTACAGGACTCAGCGGATCTACGCAAGGATGGTTCTGAGGATATTCTTCAGCGCATCACGAAACTCGTTAACGACACTTTGGCTACTGAGGATCTAACCAAAGCCATTGACTCTACTTTAACCACAGATGATCTACTCAGAGCCATTGACTGTGGCACATCTGAAGGTGGTCCTAATGGTCGACACTGGGTCTTGGATCCTATTGATGGCACCAAAGGGTACGTTTCAAAACTATCTACCCTCAAAGATCAGATGTTGTGTTCTTGAATCTATAAGCTTTCAATTTTTAGATTTTTGAGGGGAGATCAGTACGCGGTAGCACTAGGATTGCTCGAGGAAGGGAAAGTAGTTTTAGGTGTGCTTGCTTGTCCAAACTTGCCATTAACATCCATAGCAGGAAACAAGAACTCTTCTTCTTCAGACGAAATCGGATGCCTCTTCTTTGCTACGATTGGTTCAGGGACATACATGCAGCCCTTAGACTCGAAATCCGAACCAGTCAAAGTACATGTATCTAGCGTTGAGAATCCTGAAGAGGCATCCTTCTTCGAGTCATTTGAAGGAGCTCACTCTCTTCACGACTTATCCAGCTCCATTGCCAGTGTAAGCGGCTTCTCCCTTACATTCTCATGTGATTCCAGCGAGTAACTAACTGATGATCTCTTTGGTATATAATACAGAAACTTGGTGTCAAAGCGCCACCTGTCAGGATAGATAGCCAGGCAAAGTATGGAGCTTTGTCTAGAGGAGATGGTGCTATATACTTAAGGTTTCCTCATAAAGGTTACCGTGAAAAGATTTGGGACCATGTCGCTGGTGCTATTGTTGTTACTGGTAACATTATAATAAAGCCTTTCTCTTTCTTTTTTTATGAATGTGATTTTGATTATGAATTGCAATATCTTTTGGGAGCACAGAGGCAGGTGGAATCGTGACGGATGCAGGTGGAAAGCCATTGGATTTCTCGAAAGGGAAGTATCTTGATTTGGACACTGGCATCATCGTTGCTAATGAGAAGCTTATGCCTCTGCTTTTGAAAGCAGTTCGTGACTCCATTGCCGAGCAAGAGAAAGCTTCTTCATCTCTCTGATTCTTTCTTCTGTAGTGTCTCTGTGTTTGCTGTAACTCTTGTTTCACTTCCTTTCACCACTACAACTAAACATGTTTTCATTACGTAGTTGAGAATCTCTTCGATTTTCTTTTTAAAATAAAACATTTATAAATGTC
CDS Sequence
- >BnaA06G0290900ZS
ATGTCATCTATAAATTGCTTTCGAACAGCAAAGGCACCGCTTCACACATTCGCATCAGTTTCGAGATTCAGATATTCACCGAACCCTATCGTTTCTGTATTGAGAAGGAAGTCGTCTCCTTCGTTTGTTACTCTAAGAGTAGTCTCATCCATGGCTTACGAGAAAGAGCTTGACGCTGCTAAGAAAGCTGCTTCCCTCGCAGCTCGTCTCTGTCAGAAAGTTCAAAAGGCTTTGTTGCAATCGGATGTTCAATCAAAATCTGATAAAAGTCCAGTCACCGTTGCTGATTATGGTTCACAAGCAGTTGTTAGCTTAGTCTTGGAAAGGGAACTCACTTCTGAACCCTTTTCATTGGTCGCTGAAGAGGACTCAGCGGATCTACGCAAGGATGGTTCTGAGGATATTCTTCAGCGCATCACGAAACTCGTTAACGACACTTTGGCTACTGAGGATCTAACCAAAGCCATTGACTCTACTTTAACCACAGATGATCTACTCAGAGCCATTGACTGTGGCACATCTGAAGGTGGTCCTAATGGTCGACACTGGGTCTTGGATCCTATTGATGGCACCAAAGGATTTTTGAGGGGAGATCAGTACGCGGTAGCACTAGGATTGCTCGAGGAAGGGAAAGTAGTTTTAGGTGTGCTTGCTTGTCCAAACTTGCCATTAACATCCATAGCAGGAAACAAGAACTCTTCTTCTTCAGACGAAATCGGATGCCTCTTCTTTGCTACGATTGGTTCAGGGACATACATGCAGCCCTTAGACTCGAAATCCGAACCAGTCAAAGTACATGTATCTAGCGTTGAGAATCCTGAAGAGGCATCCTTCTTCGAGTCATTTGAAGGAGCTCACTCTCTTCACGACTTATCCAGCTCCATTGCCAGTAAACTTGGTGTCAAAGCGCCACCTGTCAGGATAGATAGCCAGGCAAAGTATGGAGCTTTGTCTAGAGGAGATGGTGCTATATACTTAAGGTTTCCTCATAAAGGTTACCGTGAAAAGATTTGGGACCATGTCGCTGGTGCTATTGTTGTTACTGAGGCAGGTGGAATCGTGACGGATGCAGGTGGAAAGCCATTGGATTTCTCGAAAGGGAAGTATCTTGATTTGGACACTGGCATCATCGTTGCTAATGAGAAGCTTATGCCTCTGCTTTTGAAAGCAGTTCGTGACTCCATTGCCGAGCAAGAGAAAGCTTCTTCATCTCTCTGA
Protein Sequence
- >BnaA06G0290900ZS
MSSINCFRTAKAPLHTFASVSRFRYSPNPIVSVLRRKSSPSFVTLRVVSSMAYEKELDAAKKAASLAARLCQKVQKALLQSDVQSKSDKSPVTVADYGSQAVVSLVLERELTSEPFSLVAEEDSADLRKDGSEDILQRITKLVNDTLATEDLTKAIDSTLTTDDLLRAIDCGTSEGGPNGRHWVLDPIDGTKGFLRGDQYAVALGLLEEGKVVLGVLACPNLPLTSIAGNKNSSSSDEIGCLFFATIGSGTYMQPLDSKSEPVKVHVSSVENPEEASFFESFEGAHSLHDLSSSIASKLGVKAPPVRIDSQAKYGALSRGDGAIYLRFPHKGYREKIWDHVAGAIVVTEAGGIVTDAGGKPLDFSKGKYLDLDTGIIVANEKLMPLLLKAVRDSIAEQEKASSSL