Information report for BnaA05G0349400ZS
Gene Details
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Functional Annotation
- JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. The jumonji-C is frequently found in proteins with histone demethylase activity. jmjd5 mutant plants have a short-period circadian phenotype.
Homologous
- Arabidopsis thaliana — AT3G20810
Gene Resources
- Pfam: PF13621
- UniProt: A0A078G3N4
- EMBL: HG994359 , LK032098
- AlphaFoldDB: A0A078G3N4
- OMA: KASYQEC
- InterPro: IPR003347 , IPR041667 , IPR056520
- PANTHER: PTHR12461 , PTHR12461:SF105
- SUPFAM: SSF51197
- PROSITE: PS51184
- Gene3D: 2.60.120.650
- SMR: A0A078G3N4
- STRING: 3708.A0A078G3N4
Sequences
gDNA Sequence
- >BnaA05G0349400ZS
GTCTGTGTCAAGACTTGAAAGCTCTCAATTGTCTTTTACAACATAGGCTTAGACAAAACAAACATCTTCATGCTCAGTCTCAGAGCAATTGATTTCTTCTCTACTTACTTTTAAGATCTAACACAATTGACGTAAGAGACAGAGTGAACAAACCAGAAACAGAGATTAAAAATACTCCATTTGCTAAGAATCAGAGGACTCTGCTTCATTGCTCCACCAGAAGCTAACCGAGAAACTCATTGTTAAAGACCTGACATAGTGCCACCATTTGGGAGGGATGTACAGCATTTCGCCTTCCTCTAGGATACAATCCATAAACTCTAGCTCCACCACCTTTGGAAACTCGTTCTTGTCGATGTTGTCAAGATCAACCTTCAACCAAAGTTTGAAACCACCCCGTTTGGACACAAGGATCAAGTCGACTCAGCTTCCGTTTAAACACAGTATCAGATTTGAATATAGGATTAGAAAACTTACCTGGCTAGAGTTGCAAAGCATTGTCTCAGAATAAGGGTAAAGTTCGTCTTGCAATGAGGATGGGTAAAGCCTTATATACTTCTTGCCAACAACCTGAAGAACAGATGATATCAAACATTAAATAGGAGAATGAAAAGAAAAAATTAAATAAATTTTCCGGGGTGAAACGATAAGTTTGGTTAGTCAAACTAAGAGTTTAGTTTTTGTTCAGACATCAGGCTTCAATCCAGCGAGATGATCAGGCTTTCTTATGCAAGAACATCAAAGAAGAAGAAGCTCGTTAATCACTTACAGAACGTATACATTGGGGACAAGCGTATAAAGAGAGGGAGCAGCACAGACAAGAAGCCATGTTCATTTATGGAAAAAGATCTGAAGCCATAAATACCTGAGCAAGTATATTATGATGTGGATCATGGTGTAAGGGAGTAACTGTCCCAGCCGGACCAAACCACGCATTAAGAGATTGGAGATCCCCTCCACCGACAAAACAGTAATCAGGAATACATATATCATCTCTCAGTTCATTTATCTGCCCACCCAGTCATGTTAAACCAATAAGCCATAGCTTCAAGTAATCAGTATATGATGATGATGCACAACACGTATACATGATACCTGATCAAACAACGGATGCTGAGCAAGATAAGTAGGCTCCACGGAGGTGGATCTATTGGTCCTCATCCGTTCAAGGAACTTGGAAAACGTCACAAGCTCTTGCTTCCAATCTGAACACAAATAGTTTTTCCCCACCTGTATAGCATTTCAAACTTCTAACAGCTTTCAGCTATTCTGATTCAGTCAAAACTCTAACTCAACACTCAAAAGCTAACTAAAAACATGATTACAGATACAATAAGCGAAGAAACGATGAGTAAGTCACCTCGACGGGAACGGTACGGTTACCAGCAACAGAAGTGAGATAGTCCAAGTGGTTCCACTTGGTCCTAGCAGGCCAATGAGCCATACAATTGGTTATAACAACAGGTGTACCTGTCTGAAAATAATCACGCAGAAACCCCTCCATAGATAAGTCAGACCTCTTGTCTACTCTTCCACTAGTCAATGACCTCAAAGGTAGAATCTTTAGCACCTGCAAGTAAAGTTTTCAACAAACCCAACACTCTCAGTTCCCGACAAACTAAACTAATCCTACCAAAATGTTAACAAGATCTGAGCTTTTTACCTCATTGACGTCGACGGGAACTTCAGGGACAAGTTTCTCACCCTTGAAATCTCCGAGGCTCTTAGCCTTCTTACGAGCTTCAGAGGAGACCAAGAGCACAGAGTCGTGGAGGTCCTTGCGGAGAAGCGTCCCTCCCATGATGAGACCCATATCGAGCGCGCCGAGAGCTTCCCCAAACTCGCCGGCGGCGAAATGGAACTTGGCCACGTGGAGACACGCCATCGAGTAAGCGTCGCGCCACACGGGGAGAACAGAGTGCCAGGGACCGGAGTGAAGCTGCTCCCAGGCCATATCACGCGCCGCCTCCGCCGCGCTTTGGTCGCCGGCGACTGCTAGCGCCGCCATGCGAGCATAGGCGTAACCGCCTTGAGCGGAGATCGACTGCAGCAGGGACTGCGACTCCGCGTCGAGGGTTGGAGTCGGGAGATGGAGGCTGTGGTTGCCGGAGGAAGCGGCGGTGGGAGCTCCTGACATGGTTCGGGTCGGGTTTTGGTTTTGGGGGTTAAGTGAAGATATTTT
CDS Sequence
- >BnaA05G0349400ZS
ATGTCAGGAGCTCCCACCGCCGCTTCCTCCGGCAACCACAGCCTCCATCTCCCGACTCCAACCCTCGACGCGGAGTCGCAGTCCCTGCTGCAGTCGATCTCCGCTCAAGGCGGTTACGCCTATGCTCGCATGGCGGCGCTAGCAGTCGCCGGCGACCAAAGCGCGGCGGAGGCGGCGCGTGATATGGCCTGGGAGCAGCTTCACTCCGGTCCCTGGCACTCTGTTCTCCCCGTGTGGCGCGACGCTTACTCGATGGCGTGTCTCCACGTGGCCAAGTTCCATTTCGCCGCCGGCGAGTTTGGGGAAGCTCTCGGCGCGCTCGATATGGGTCTCATCATGGGAGGGACGCTTCTCCGCAAGGACCTCCACGACTCTGTGCTCTTGGTCTCCTCTGAAGCTCGTAAGAAGGCTAAGAGCCTCGGAGATTTCAAGGGTGAGAAACTTGTCCCTGAAGTTCCCGTCGACGTCAATGAGGTGCTAAAGATTCTACCTTTGAGGTCATTGACTAGTGGAAGAGTAGACAAGAGGTCTGACTTATCTATGGAGGGGTTTCTGCGTGATTATTTTCAGACAGGTACACCTGTTGTTATAACCAATTGTATGGCTCATTGGCCTGCTAGGACCAAGTGGAACCACTTGGACTATCTCACTTCTGTTGCTGGTAACCGTACCGTTCCCGTCGAGGTGGGGAAAAACTATTTGTGTTCAGATTGGAAGCAAGAGCTTGTGACGTTTTCCAAGTTCCTTGAACGGATGAGGACCAATAGATCCACCTCCGTGGAGCCTACTTATCTTGCTCAGCATCCGTTGTTTGATCAGATAAATGAACTGAGAGATGATATATGTATTCCTGATTACTGTTTTGTCGGTGGAGGGGATCTCCAATCTCTTAATGCGTGGTTTGGTCCGGCTGGGACAGTTACTCCCTTACACCATGATCCACATCATAATATACTTGCTCAGGTATTTATGGCTTCAGATCTTTTTCCATAA
Protein Sequence
- >BnaA05G0349400ZS
MSGAPTAASSGNHSLHLPTPTLDAESQSLLQSISAQGGYAYARMAALAVAGDQSAAEAARDMAWEQLHSGPWHSVLPVWRDAYSMACLHVAKFHFAAGEFGEALGALDMGLIMGGTLLRKDLHDSVLLVSSEARKKAKSLGDFKGEKLVPEVPVDVNEVLKILPLRSLTSGRVDKRSDLSMEGFLRDYFQTGTPVVITNCMAHWPARTKWNHLDYLTSVAGNRTVPVEVGKNYLCSDWKQELVTFSKFLERMRTNRSTSVEPTYLAQHPLFDQINELRDDICIPDYCFVGGGDLQSLNAWFGPAGTVTPLHHDPHHNILAQVFMASDLFP