Information report for BnaA05G0142800ZS
Gene Details
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Functional Annotation
- Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis.
Homologous
- Arabidopsis thaliana: AT5G37260.1
- Brassica oleracea: XP_013588463.1, Bo6g057640
- Brassica rapa: XP_009144670.1, Bra039503
- Raphanus raphanistrum: RrC2529_p2
Gene Resources
- Pfam: PF00249
- UniProt: A0A078HLV3
- EMBL: LK032426
- AlphaFoldDB: A0A078HLV3
- KEGG: bna:106451553
- OMA: VNCVIDK
- InterPro: IPR001005 , IPR006447 , IPR009057 , IPR017884 , IPR017930
- PANTHER: PTHR12802 , PTHR12802:SF175
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51293 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A078HLV3
- SMR: A0A078HLV3
- CDD: cd00167
- STRING: 3708.A0A078HLV3
Sequences
gDNA Sequence
- >BnaA05G0142800ZS
TGGTACAAAATCTTATATCGGACGAGTCATTTTCTTCTACAACCATGGTTATGCAGGTGTGAGATCTTTCTTCCTTTGTTTATATATGTTAGACAAAACCTGAAATTAGGAAAAAACCAAGAGAGGTAAGTTAGGTCTTTCCAAATCCAAAAGATCAAACGAGTTTTGATGGTCTATGTCGGAGAGATATTGGAACTGAAGAATATTCGATTGTCGCAGGTTAATTGTGTAATAGACAAGGCGAGTTTGTGGGATGTTAAGGTCGGTTGTGTGTTAAGGAGAGTCCTACTTAAATGTTATTGGGAACTAGGTAAGATCAAGTCTCGAAACCCTAATTATTTGATGGTCTAACTCCTCTAGATGCGTGTGAATTAGTTTTGTAGAGACTTCAAATCTTTACTATGAGCTCTGCCTGTCTAGAGACTAATTGTTTTTTTTTTCTGATTATAGGAACATTGTGAGAGCTTATGCGACAGAGCTTCGGATGAGCTTATTATCTCTTCCACAGATGCCTTTTGTCTCAAGGTATTAAATTGGGTTTCTAAATCTCTTGATAGGTTTCAGATTTCAAGTTTAGTTCTAAATATTTTTTTATTTTTTTTTTTAAATAATGAGTGTGTTAAATTAGTTCTAAATTTTGTTGTTTTGGGTTTTGCTGTTATTCAGACAAGAAAGCCTTACACGATCACTAAACAAAGAGAGAAGTGGACAGAAGCAGAGCATGAAAAGTTTGTAGAAGCTTTAAAACTCTATGGCAGAGCTTGGAGACGAATCGAAGGTGTGTGTGTGTGTGTTGCTTTATCTGACTTTAGAGAATCTTTTATTTAATACACATTATTCTAAAATACTAGGTTTGAAGAACATGTTGGGTATATATTGTTTTGACATTTATTAATTCTTGATTTGAACAGAACATGTTGGAACAAAGACTGCGGTTCAGATTCGAAGCCATGCTCAGAAGTTCTTTACTAAGGTTGCTCGTGATTGCGGTGTTACCTCTGAGAAATCCATTGAGATCCCGCCTCCACGGCCGAAAAGAAAGCCGATGCATCCATACCCTAGAAAGCTAGTGATTCCAGATGCAAAAGAGATGGCATACGCCGGCAAGCTGGTTCCGGATGAAGATAGCCGATCGCCAACATCGGTTTTATCAGCTCATGGCTCAGATGGCTTAGGTTCCATTGGTTCAAATTCGCCTAATTCTTCTTCAGCTGATTACCAGGTTTGTAGTTACAAGACACACAATCTGATACTAGTGTTTAGTTGTCATTTTGTGTTTAATTCTGACATTGTTATGTTTTCGACAGGTGCATGAGTTATCATCTCACACTGAGGAATCATTGTCTCCTGAAGCTGAGACCAAACAACAAAGTCTCAAGCTGTTTGGAAAGACTTTTGTAGTTGGTGATTACAACTCTTGGACAAGCTCTAATGATTCAGAAGATGTTAAGAAGAAGTCAGACTTAGAAACGCAGTCTGTCCGATGCACTTCTTCTTCGTCTTCTTCATCAGAAAATGCTGAAACGGAATTGACACAACAGGTAGTTGTAGTAGTAGTATCGGAGGAGTTTAAAAGAAGCGAGAGATCAGCATTTTCTCAGTTGAAATCGTCTGCGATTGCGATGAAGAATATGAAAGGGTTCATGCCTTACAAAAAAAGGATGAAGGTGGAAGGAAACACTAACAGTTTAGTGAAAACGTCATATCCTATATGGTGA
CDS Sequence
- >BnaA05G0142800ZS
ATGGTACAAAATCTTATATCGGACGAGTCATTTTCTTCTACAACCATGGTTATGCAGGAACATTGTGAGAGCTTATGCGACAGAGCTTCGGATGAGCTTATTATCTCTTCCACAGATGCCTTTTGTCTCAAGACAAGAAAGCCTTACACGATCACTAAACAAAGAGAGAAGTGGACAGAAGCAGAGCATGAAAAGTTTGTAGAAGCTTTAAAACTCTATGGCAGAGCTTGGAGACGAATCGAAGAACATGTTGGAACAAAGACTGCGGTTCAGATTCGAAGCCATGCTCAGAAGTTCTTTACTAAGGTTGCTCGTGATTGCGGTGTTACCTCTGAGAAATCCATTGAGATCCCGCCTCCACGGCCGAAAAGAAAGCCGATGCATCCATACCCTAGAAAGCTAGTGATTCCAGATGCAAAAGAGATGGCATACGCCGGCAAGCTGGTTCCGGATGAAGATAGCCGATCGCCAACATCGGTTTTATCAGCTCATGGCTCAGATGGCTTAGGTTCCATTGGTTCAAATTCGCCTAATTCTTCTTCAGCTGATTACCAGGTGCATGAGTTATCATCTCACACTGAGGAATCATTGTCTCCTGAAGCTGAGACCAAACAACAAAGTCTCAAGCTGTTTGGAAAGACTTTTGTAGTTGGTGATTACAACTCTTGGACAAGCTCTAATGATTCAGAAGATGTTAAGAAGAAGTCAGACTTAGAAACGCAGTCTGTCCGATGCACTTCTTCTTCGTCTTCTTCATCAGAAAATGCTGAAACGGAATTGACACAACAGGTAGTTGTAGTAGTAGTATCGGAGGAGTTTAAAAGAAGCGAGAGATCAGCATTTTCTCAGTTGAAATCGTCTGCGATTGCGATGAAGAATATGAAAGGGTTCATGCCTTACAAAAAAAGGATGAAGGTGGAAGGAAACACTAACAGTTTAGTGAAAACGTCATATCCTATATGGTGA
Protein Sequence
- >BnaA05G0142800ZS
MVQNLISDESFSSTTMVMQEHCESLCDRASDELIISSTDAFCLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFTKVARDCGVTSEKSIEIPPPRPKRKPMHPYPRKLVIPDAKEMAYAGKLVPDEDSRSPTSVLSAHGSDGLGSIGSNSPNSSSADYQVHELSSHTEESLSPEAETKQQSLKLFGKTFVVGDYNSWTSSNDSEDVKKKSDLETQSVRCTSSSSSSSENAETELTQQVVVVVVSEEFKRSERSAFSQLKSSAIAMKNMKGFMPYKKRMKVEGNTNSLVKTSYPIW