Gene Details:
- Gene ID: BnaA05G0047300ZS
- Suggest Gene Name: HNRNP R-LIKE PROTEIN
- Description: putative flowering gene
- Species: Brassica napus
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Arabidopsis thaliana — AT2G44710
Sequences:
gDNA Sequence
- >BnaA05G0047300ZS
TTAGGTCTCATTGGCTCAGAAACAGAAAAAAAAAACACAACAACACAAGAGGAAAGCTATGCCACCAAAGGTTGTCAAGAGAGGAGGAGGAGCCGCCGCGAGACGAGGCGGTAGGGTCACGAGATCGGCTGTCAAGGCTCAGAATCCGCCAATTGAATCCGCCGATGACGGAGAGACATCCGTCTCCGATGCTGTGGATGCGAAGGAAGAGACGCCGGAGGAGGAGGTGGATAAATCTATCGAGGAAGAGAATCAATTAGACGAGTCGAAGCAATTGGATGATCTCGAAGCTGCGGCGAATCCAAACGACGTCGTTCCGCCTCAAAGTAAGATGATTTTTCATTGTTTTTAACGGATCCAATCTTCGATTTGATGAAAAGTTTGTGACTTGTTGACCGTAGAATGATTTAGATTTTAGAGCTAACTGTTCTAACTTCTATTCGCCTAATCCCAAATATTTAAAATAAAATTAGATTGGCAAAAATTTTATTAAAACATTTACTAAATAGTCTACTGCTCCCAGGTCCGGCCCTGTTGTAGGTTTTGTTAACTTTAGGAATAGTGTAGATGTTTTACTCAGCTTTTAACTCGCAGAGGAGACTGTGGATGATTTGGGGAAAGATGAAAGATTGGATTTAGATGACAATGAGCCAGAGTACGACGCCGATGAGTACGGCGGGGAGGAGGAGTTTGAGGAGAGGGAGGAGGAGTATCATGAGTTGGTTAATCAGGAGGAGGATGAGTTTGAGGCCGAGGTAGAAGGTGAGGAGATTGGAGATCTTCAGGAGAGCGAAGGCGATGCTGAAGAAGAAGCCAAGCTTGGAGAAGCTGGCCATGTGGGAGAGGAAGAGGAGTATGATGATGTTCTCAATGATAGGCGTAAGAGTAAGGAGTTTGAGATCTTTGTTGGGAGCTTGGACAAGGGAGCTACGGAGGAGGATTTGAAGAAAGTGTTTGGTCACGTTGGGGAGGTGACTGAGGTTAGGATTGTGAAGAATCCGCAGACGAATAAGAGCAAAGGTTATGCTTTCCTGCGTTTTGCTACTGTGGAACAAGCGAAACGAGCTGTTAAAGAGCTTAAAAGCCCAATGGTAAACCCGTCTACAACTTTAGTATTTGATGGAGAGTTTGTGCTAGCTTTTACATTGTGTGTATACATTGGGACTGCAGATCAATGGTAAAAAGTGTGGTGTAACTGCAAGCCAAGATAATGATACTCTCCTCATTGCTAACATATGCAAGACATGGACCTCAGAAGCTGTAAGTATCAGCGTGTCCATTGATATGTCACAATTAAAACCCCAACTCCACAGTTCGTGGTGATTTTTGACCGTTGGGTCTTTTGCTGTGTGTTTCAGTTGAGGGAGAAGCTGAAACACTATGGCGTTGAGAGTATGGATGAGATTGCTTTGGTAGAGGACAGCAACAATGCCAACATGAACCGAGGGTATGCGTTTTTGGATTTCGCATCTCGCTCGGATGCCGTGGATGCTCACAAACGCCTTATAAGGAAGGAAGTGGTGTTTGGACTTGAAAAGCCTGCAAAGGTTTCTTTTGCAGATTCCTTCTTGGATCCGGAAGATGAGATGATGGCGCAGGTACTCACAATGCAGGATCATTTATTTGTTGCATGCAAACTTTCATCCTGCCATTGTCTTCTTTTGAGCGTTGGAGGAGTTTATAAGGGCAGGCATGGATGCCACCTACCTATTCACTTAAAAGTTTTTTCTTTTATGTCTCTGTATGGTAGCTTAGAATGCTTTCTAACAACATTTTAGATACTTGATTATTGATTGTTGGTGATTATATTTATCTGGCTGTAGTACTTAATTTAATTGGTGTTGCAGGTTAAGACTATCTTCATTGATGGACTGTCAACATCATGGAGTGAAGAGCATGTTAGAGACCTTTTGAAAAGATATGGCAAACTTGAGAAAATTGAGCTTGCGCGCAATATGCCATCAGCCAGGAGGAAAGACTTTGGTTTTGTAACTTTCGATACCCATGAGGCTGCTGTGACTTGTGCCAAAGCAATCAACAACTCAGAACTAGGCGAAGGAGAGGACAAGGTATATGCCTCTATTTTTATGGCTTATCCTTATTTACGCAAGTATATTGTTTCTAATTCCTCCTTTTTTTCCAGGCAAAAGTGAGGGCACGCTTGTCTAGACCACTTCATGGAGCAGGCAAAGGCAGGCAGCCCAGTCGCTCAGACCACCGGTCTAGTAGGCATGGGAGTAGACGATCTGGAAGGAGTTCACTGGCTCGTCTGCCACCTCGTAGCTCTAGAGGCGTTGGACCTCGAGCCCCACCTCCTAGTAGTGCAAAGAGAGTTAGTGGATCAAGAGGAAGACGTCCACGACCACCTCTACCTCCACCTGCAAGAGCTAGGCCCTCTAGGCCCTTGCCACCACCTGCAAGATCCAGGCCATTACCACCATCTGCAAGATCCAGGCCCTTGCCACCACCTGCTAGGTCTTATGACAGAAGACCTCCAGGTACCACTGGACTTTTTGTTTATCCATGTTCAGTTATCTTTTTTTTTTGTTCATTTATTTGAGTTTTTTTTTTATTTTGCAGTTCCTCCGTATCCAAAGGCTAGCTTGAAGAGGGACTATGGTCGGCGTGAGGATCTTCTTCCTCCGAGAAGCAGACCAGCTGTGAGCTATAGTAGCTCCAGGCTTTCTCCTGAGAGGCATCTGTCTTACAGAGATGATTATGCACCTCGTGGGTCTGGTTATTCAGATATTCCTAGAGATTCTTCTCGCTTAGAAATGAGGAGGCCGTACGGGGAAGACCTTTACAGTCCGAGGTTTGAAAGACCTCCTCCAAGTTACAGTGAAGGGAGATCTCGTGCTTATGATGAGCCTCTTCCTGGATCAAAGCGACCATATTCTGCATTGGTCTGATTTATTACTTTCTCTGACCATTTTGTTCTCTAATCAAACTATATGATTGTTTTCTTAAACAAGTGTTTATATCATTCAGGATGACATTCCTCCCCGTTATGCTGACGTCGATGCTCGTCATTCAAGAGCTCGTCTGGACTATGATCTTGGCCCATCTCAGTATGGAGAATCATATGGGGACCGGTATGTTCTCGTTCTATGGATATCTTTGTGATATGTGTATGTCTTGGTTTCTTACTTCCATGTTTATTTTAGGATTCCTAGATCTAGTTTAGGATATGGAAGCAGCCGAAATGCAATGACAAGTCATGACTCGCGTGGTCCATATAGCAGCAGTCGTCAGGGAATGGATTATGGAGGAGGTTTGTTTGATAACTCTCTGTTGTGGCTTAACATACAGCAATACTGCGTCGAGATGCAAACACTTACATGGCTATGTTTCTTTACTTCAGGTTCGTATAGTAGCAGCGATGTAGGAGGAATATACTCATCAAGCTATGGTAGTGAACCACCCAGAAGAGATGTAAGTTCAAGCTATGGTAGTGACATACCCCCCAGAAGAGATGTAAGTGGCTTCAGAAACATTCTCGTTTTCTCTTTTTTGTTGGAAAGTTGAGTTGAGAGTAACTTTTTATTACAGGGAGGTAGCTCGTATTCTTCAGTATACTCAAGTCGTGGACTGGGTGGTAGTAGTTACTCAGGTGGTGGTGGTGGTCCAGGATCATACTACTGAAGTGAGTTAGTGGTCATCTTTTGGTTCCTTCTTCATAACAAGTTTTAGGTTGTCTCTTGTGGTGCATTGTTTTGTTACTTGGAACGCCATCTAAGCAATGTGATTATGGAACAAATGGATTTACCAAGTGATTAAATTTGTAAATGGAACAGGTTTCGCCAGGAAGGAGGTTTGACCTATGCAAAGTTATGCAGGAGATAAGCAATTTGGTTGCAGGGCTATAAACCTGGGGGAGACTGTCGGAATAGAGAGTAGTAATAATGGATAATGAATTGGCTTCTTGTTTTAAGTGGCTTGCATCTTCAACTGCATTTGTATTTGAATCTGTTTTAGATGGTGTGACAAGCTTCAGTTATATAAACATGTTTTTTTGTTTTTTTATATATAGTAAAACTCTATTTGAGATTTATCATTTTTTATTTATTAATAAAGTTATCTTTTTAT
CDS Sequence
- >BnaA05G0047300ZS
ATGCCACCAAAGGTTGTCAAGAGAGGAGGAGGAGCCGCCGCGAGACGAGGCGGTAGGGTCACGAGATCGGCTGTCAAGGCTCAGAATCCGCCAATTGAATCCGCCGATGACGGAGAGACATCCGTCTCCGATGCTGTGGATGCGAAGGAAGAGACGCCGGAGGAGGAGGTGGATAAATCTATCGAGGAAGAGAATCAATTAGACGAGTCGAAGCAATTGGATGATCTCGAAGCTGCGGCGAATCCAAACGACGTCGTTCCGCCTCAAAAGGAGACTGTGGATGATTTGGGGAAAGATGAAAGATTGGATTTAGATGACAATGAGCCAGAGTACGACGCCGATGAGTACGGCGGGGAGGAGGAGTTTGAGGAGAGGGAGGAGGAGTATCATGAGTTGGTTAATCAGGAGGAGGATGAGTTTGAGGCCGAGGTAGAAGGTGAGGAGATTGGAGATCTTCAGGAGAGCGAAGGCGATGCTGAAGAAGAAGCCAAGCTTGGAGAAGCTGGCCATGTGGGAGAGGAAGAGGAGTATGATGATGTTCTCAATGATAGGCGTAAGAGTAAGGAGTTTGAGATCTTTGTTGGGAGCTTGGACAAGGGAGCTACGGAGGAGGATTTGAAGAAAGTGTTTGGTCACGTTGGGGAGGTGACTGAGGTTAGGATTGTGAAGAATCCGCAGACGAATAAGAGCAAAGGTTATGCTTTCCTGCGTTTTGCTACTGTGGAACAAGCGAAACGAGCTGTTAAAGAGCTTAAAAGCCCAATGATCAATGGTAAAAAGTGTGGTGTAACTGCAAGCCAAGATAATGATACTCTCCTCATTGCTAACATATGCAAGACATGGACCTCAGAAGCTTTGAGGGAGAAGCTGAAACACTATGGCGTTGAGAGTATGGATGAGATTGCTTTGGTAGAGGACAGCAACAATGCCAACATGAACCGAGGGTATGCGTTTTTGGATTTCGCATCTCGCTCGGATGCCGTGGATGCTCACAAACGCCTTATAAGGAAGGAAGTGGTGTTTGGACTTGAAAAGCCTGCAAAGGTTTCTTTTGCAGATTCCTTCTTGGATCCGGAAGATGAGATGATGGCGCAGGTTAAGACTATCTTCATTGATGGACTGTCAACATCATGGAGTGAAGAGCATGTTAGAGACCTTTTGAAAAGATATGGCAAACTTGAGAAAATTGAGCTTGCGCGCAATATGCCATCAGCCAGGAGGAAAGACTTTGGTTTTGTAACTTTCGATACCCATGAGGCTGCTGTGACTTGTGCCAAAGCAATCAACAACTCAGAACTAGGCGAAGGAGAGGACAAGGCAAAAGTGAGGGCACGCTTGTCTAGACCACTTCATGGAGCAGGCAAAGGCAGGCAGCCCAGTCGCTCAGACCACCGGTCTAGTAGGCATGGGAGTAGACGATCTGGAAGGAGTTCACTGGCTCGTCTGCCACCTCGTAGCTCTAGAGGCGTTGGACCTCGAGCCCCACCTCCTAGTAGTGCAAAGAGAGTTAGTGGATCAAGAGGAAGACGTCCACGACCACCTCTACCTCCACCTGCAAGAGCTAGGCCCTCTAGGCCCTTGCCACCACCTGCAAGATCCAGGCCATTACCACCATCTGCAAGATCCAGGCCCTTGCCACCACCTGCTAGGTCTTATGACAGAAGACCTCCAGTTCCTCCGTATCCAAAGGCTAGCTTGAAGAGGGACTATGGTCGGCGTGAGGATCTTCTTCCTCCGAGAAGCAGACCAGCTGTGAGCTATAGTAGCTCCAGGCTTTCTCCTGAGAGGCATCTGTCTTACAGAGATGATTATGCACCTCGTGGGTCTGGTTATTCAGATATTCCTAGAGATTCTTCTCGCTTAGAAATGAGGAGGCCGTACGGGGAAGACCTTTACAGTCCGAGGTTTGAAAGACCTCCTCCAAGTTACAGTGAAGGGAGATCTCGTGCTTATGATGAGCCTCTTCCTGGATCAAAGCGACCATATTCTGCATTGGATGACATTCCTCCCCGTTATGCTGACGTCGATGCTCGTCATTCAAGAGCTCGTCTGGACTATGATCTTGGCCCATCTCAGTATGGAGAATCATATGGGGACCGGATTCCTAGATCTAGTTTAGGATATGGAAGCAGCCGAAATGCAATGACAAGTCATGACTCGCGTGGTCCATATAGCAGCAGTCGTCAGGGAATGGATTATGGAGGAGGTTCGTATAGTAGCAGCGATGTAGGAGGAATATACTCATCAAGCTATGGTAGTGAACCACCCAGAAGAGATGTAAGTTCAAGCTATGGTAGTGACATACCCCCCAGAAGAGATGGAGGTAGCTCGTATTCTTCAGTATACTCAAGTCGTGGACTGGGTGGTAGTAGTTACTCAGGTGGTGGTGGTGGTCCAGGATCATACTACTGA
Protein Sequence
- >BnaA05G0047300ZS
MPPKVVKRGGGAAARRGGRVTRSAVKAQNPPIESADDGETSVSDAVDAKEETPEEEVDKSIEEENQLDESKQLDDLEAAANPNDVVPPQKETVDDLGKDERLDLDDNEPEYDADEYGGEEEFEEREEEYHELVNQEEDEFEAEVEGEEIGDLQESEGDAEEEAKLGEAGHVGEEEEYDDVLNDRRKSKEFEIFVGSLDKGATEEDLKKVFGHVGEVTEVRIVKNPQTNKSKGYAFLRFATVEQAKRAVKELKSPMINGKKCGVTASQDNDTLLIANICKTWTSEALREKLKHYGVESMDEIALVEDSNNANMNRGYAFLDFASRSDAVDAHKRLIRKEVVFGLEKPAKVSFADSFLDPEDEMMAQVKTIFIDGLSTSWSEEHVRDLLKRYGKLEKIELARNMPSARRKDFGFVTFDTHEAAVTCAKAINNSELGEGEDKAKVRARLSRPLHGAGKGRQPSRSDHRSSRHGSRRSGRSSLARLPPRSSRGVGPRAPPPSSAKRVSGSRGRRPRPPLPPPARARPSRPLPPPARSRPLPPSARSRPLPPPARSYDRRPPVPPYPKASLKRDYGRREDLLPPRSRPAVSYSSSRLSPERHLSYRDDYAPRGSGYSDIPRDSSRLEMRRPYGEDLYSPRFERPPPSYSEGRSRAYDEPLPGSKRPYSALDDIPPRYADVDARHSRARLDYDLGPSQYGESYGDRIPRSSLGYGSSRNAMTSHDSRGPYSSSRQGMDYGGGSYSSSDVGGIYSSSYGSEPPRRDVSSSYGSDIPPRRDGGSSYSSVYSSRGLGGSSYSGGGGGPGSYY