Gene Details:
- Gene ID: BnaA03G0534800ZS
- Suggest Gene Name: HOMEOBOX GENE 1
- Description: putative flowering gene
- Species: Brassica napus
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM.
Homologous
- Arabidopsis thaliana — AT4G32980
Sequences:
gDNA Sequence
- >BnaA03G0534800ZS
TATTTGTTCCTTTCTTGGGTCATCATTATGGACTTTGGTATCCTACGACTTCCTCCATTGCCTTGAAGTTGAGTGTTGTTCAGCTTCCTCTTGTTCATTTCTGCGTACATCTCTTCTATCATGGGCTTCCATAGCCTAACCCGCGCATTTATAAACCAGTTTGATACCTTTACTCACACACAAACAACAAACAAGTCACACTTCATCTCTAGCTGCATGGATTTGTGTAACTAAACACACGTGCGACTAAAGTCTTGAAGCTTGAGTTAGATGCATTACCTGACTTCTTGTCAATCCACTTCGTATAGCAAGAAGATGTTTCTCTGAATCCGTTGGGTAACTACAATCAAAAGTATACATCAAGATCATCAATTCTAGTTAACATTGTCATCATAAAGTAGAGTTAGTGAAGAGTCACAAGATTCTTACGGGTGAAGAAAGTTTTGGAACATCCAAGTCCTTAGAACCGAGACTGATTTCTCAGGCAAGCCTCGTTGCGGTCTCCATATCTGATGGTTCTTATGCTTCAGCTGCTGAAGAAGGCAATGCTGGTGGATGATTGAGTTTTCTTGAGACTTCTCTTTGCCTCTCTCTAAAACTGATCCCATCATAAGTATCTTCTTGCTGATTCTCTCCCTCAGGTTCTTGTATAGGAACGAGATGGTTTGGAGTGCAAACCGGGTGTGTAGCTGCGGGTCTAACTCGGTTGCTGCATGGAAAGCTGATACAACTGTATGAATCTCGTCAACGCAATGACTATATCTATCATCCACCTGAAGACAAATCGCAACTCAAAAACTTAAAACAAAATCATTCTCCAGCTTATGTATAATATGTGTGAATATATACCATTTGAAGTAGATCCAAGAGCTGGGTTCTCTTTGCTTCTAGTGCTCGTCTTTGATCAAAACCTCCTTCAAGAAACTCGTTTCGAATCTCAAAACGTGAAGTAAATGCTGAATCAGAAGCCACCGACTCAGTTCCTCGAGATGAAATATAGCATTGAGGATTATTCTCTAAGCCGTGGAGGGAGTATGTAGCGAATTGAGATAGTATTTCTTGAACAGAGTGAAGATACTTTGAGCCAAATATAACATGAGAGACGTTATTATAAATGTCTTTGCTGCTGGAAGAAGCTTGCTCTGAGGTCATTTTAGTAGCAGCATAAGGACTTATCTCTGAGCACTCATCAGAAGCATCTTCTTCAGCAAATGTAGATGTTATTGGTTCACTAGGACCAACAACACCTTGTGCACATGAATATGGATGAAATCCACTATTTTCTCCAGGACTCCACATGTTGTTTGAGTAATCATCGTATGGTCTTAAATGATCCAAATGATGAAGTGGAGGAAGAGGAGGAGCCATGACCTCAAAGCTTTCGATATGGCGGGTTTCTTGAACATTGATAGAGCTTGAAGTAGATGATAAGTACCTGTTAGTGAGAAAAGAATTGAAAATATCATATCCACCCATTTGTAGAGGATCTGGTCTCATGGAATTCCATGGAAGCATTGTTGAAAAAGAAGTGGAATCATCTCTTGAAGGTATCAAATCCATGAGAAGATTGTTTTGGTTAGTCATGACATTATCCATAGAACTAAAAGTGTTGTCGTTGTCCAT
CDS Sequence
- >BnaA03G0534800ZS
ATGGACAACGACAACACTTTTAGTTCTATGGATAATGTCATGACTAACCAAAACAATCTTCTCATGGATTTGATACCTTCAAGAGATGATTCCACTTCTTTTTCAACAATGCTTCCATGGAATTCCATGAGACCAGATCCTCTACAAATGGGTGGATATGATATTTTCAATTCTTTTCTCACTAACAGGTACTTATCATCTACTTCAAGCTCTATCAATGTTCAAGAAACCCGCCATATCGAAAGCTTTGAGGTCATGGCTCCTCCTCTTCCTCCACTTCATCATTTGGATCATTTAAGACCATACGATGATTACTCAAACAACATGTGGAGTCCTGGAGAAAATAGTGGATTTCATCCATATTCATGTGCACAAGGTGTTGTTGGTCCTAGTGAACCAATAACATCTACATTTGCTGAAGAAGATGCTTCTGATGAGTGCTCAGAGATAAGTCCTTATGCTGCTACTAAAATGACCTCAGAGCAAGCTTCTTCCAGCAGCAAAGACATTTATAATAACGTCTCTCATGTTATATTTGGCTCAAAGTATCTTCACTCTGTTCAAGAAATACTATCTCAATTCGCTACATACTCCCTCCACGGCTTAGAGAATAATCCTCAATGCTATATTTCATCTCGAGGAACTGAGTCGGTGGCTTCTGATTCAGCATTTACTTCACGTTTTGAGATTCGAAACGAGTTTCTTGAAGGAGGTTTTGATCAAAGACGAGCACTAGAAGCAAAGAGAACCCAGCTCTTGGATCTACTTCAAATGGTGGATGATAGATATAGTCATTGCGTTGACGAGATTCATACAGTTGTATCAGCTTTCCATGCAGCAACCGAGTTAGACCCGCAGCTACACACCCGGTTTGCACTCCAAACCATCTCGTTCCTATACAAGAACCTGAGGGAGAGAATCAGCAAGAAGATACTTATGATGGGATCAGTTTTAGAGAGAGGCAAAGAGAAGTCTCAAGAAAACTCAATCATCCACCAGCATTGCCTTCTTCAGCAGCTGAAGCATAAGAACCATCAGATATGGAGACCGCAACGAGGCTTGCCTGAGAAATCAGTCTCGGTTCTAAGGACTTGGATGTTCCAAAACTTTCTTCACCCTTACCCAACGGATTCAGAGAAACATCTTCTTGCTATACGAAGTGGATTGACAAGAAGTCAGGTATCAAACTGGTTTATAAATGCGCGGGTTAGGCTATGGAAGCCCATGATAGAAGAGATGTACGCAGAAATGAACAAGAGGAAGCTGAACAACACTCAACTTCAAGGCAATGGAGGAAGTCGTAGGATACCAAAGTCCATAATGATGACCCAAGAAAGGAACAAATAG
Protein Sequence
- >BnaA03G0534800ZS
MDNDNTFSSMDNVMTNQNNLLMDLIPSRDDSTSFSTMLPWNSMRPDPLQMGGYDIFNSFLTNRYLSSTSSSINVQETRHIESFEVMAPPLPPLHHLDHLRPYDDYSNNMWSPGENSGFHPYSCAQGVVGPSEPITSTFAEEDASDECSEISPYAATKMTSEQASSSSKDIYNNVSHVIFGSKYLHSVQEILSQFATYSLHGLENNPQCYISSRGTESVASDSAFTSRFEIRNEFLEGGFDQRRALEAKRTQLLDLLQMVDDRYSHCVDEIHTVVSAFHAATELDPQLHTRFALQTISFLYKNLRERISKKILMMGSVLERGKEKSQENSIIHQHCLLQQLKHKNHQIWRPQRGLPEKSVSVLRTWMFQNFLHPYPTDSEKHLLAIRSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKLNNTQLQGNGGSRRIPKSIMMTQERNK