Information report for BnaA03G0408400ZS
Gene Details
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Functional Annotation
- Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.
Homologous
- Arabidopsis thaliana — AT5G61380
Gene Resources
- Pfam: PF06203 PF00072
- UniProt: A0A816VMC2
- EMBL: HG994357
- AlphaFoldDB: A0A816VMC2
- InterPro: IPR001789 , IPR010402 , IPR011006 , IPR045279
- PANTHER: PTHR43874 , PTHR43874:SF1
- SUPFAM: SSF52172
- PROSITE: PS50110 , PS51017
- Gene3D: 3.40.50.2300
- OrthoDB: A0A816VMC2
- SMR: A0A816VMC2
Sequences
gDNA Sequence
- >BnaA03G0408400ZS
GTCATCTCCTTGTCCTAAAAATATCCCCGCGCGTCCTACCAACGCGCACTGTCGGAGAAACTTCCAATCTCCGCCGTCCATTCTCATCAACGCCTTCAGATTACCATCGTCCATTTCCCCTTCTCAGCGTCTCATTATTTGACCCCTGATTGACAAAAACAAATATCTCTCTCTCTCTCGTGTTTTTCTCACTTCTTGTCGGAAAGGAAACTCTCTCTCCTCAATCTCACCGCCGGCGTTGCTTCGGATCGCCGGTGATTTTGTTTGAGCTGCTATCGATTGTTGATTTCAACACTTTACCGGAGATAAAGAGTTTGACTTTTTGTTCTTAGATTTAGTTTTTGTTTCAACGTTTCGATGGCTATAAGATTAGGTTGGGGAGATAAAAAGAGTAACTTTTGGTTTGTTGTTGTGAAATGAAGTGACTTTGAATAGACAAATTAGGCGACTTTGTAGGGACACTGTACCGAAACCCTAAGTTCTGGTTTGGCCATGGAAGTATCATAGCACTTTCTCTTGTCTGGGTTTTATTTGTCTTAATCTTTTGTATAACCCTCTTTTTTTTTAATTTTTAGTGGAAAATTAGTTTCTTTGATTAGATATTTTTGTGGGTTTTGTGGGGTTTTGTCTGTAAATCTGATCATGGATTTGAACGGAGAGTGTAAGGGAGGAGGAGGAGATGGGTTTATTGACAGAAGCAGAGTTAGGATTTTGCTTTGTGACAATGATCCCAATAGCTTGGGAGAGGTTTTCACCCTCCTTTCACAGTGTTCTTATCAAGGTATATTTTATATTCAGTTTGATGATGGATTTGAGTTTTTTTTTTACTCTTTGTACAATGAGTATTGTGGATGGCTGTTTTTGTAGTGACGTCAGTCAAATCAGCAAGGCAGGTGATTGATGCACTGAATGCAGAGGGGCCTGACATCGATATAATACTGGCGGAGATTGATCTCCCAATGGCCAAGGGTATGAAGATGCTAAGGTACATCACACGTGACAAAGATCTTCGGAGAATCCCTGTCATCAGTAAGTTCCATTTTCTTTTTAAGTATTCATTTACTTTCTCTACTTAGCAAAGTTTTTTTTTAAATGCATGAGGGTTTGCTGTATGATAACTAATCTTATGATATTTTTCAATTTAAGTGATGTCGAGGCAAGACGAGGTCCCTGTGGTGGTAAAGTGCTTGAAGCTAGGTGCAGCTGACTACCTTGTGAAGCCTCTTCGGACCAACGAGCTTCTCAACTTGTGGACACACATGTGGAGAAGAAGACGCATGGTTTGTTTTTTTTCTATCTTTAGTTCTCTCTATGCGGTTAACTGTCATATTCCTTGTTATATGATTGAGCGTGTGTGTGTGTGTGTTTGTTTTGGCAGCTAGGACTTGCTGAGAAGAACATGTTGAGCTATGAGTTCGATCTCGTGGGATCTGACCCAAGTGATCCAAATACAAACAGCACCAACCTCTTCTCTGATGACACAGATGAGAGAAGTATTAGGTCCACCAATCCGCAGAGAGGAAGTCATCAGGAAAAGGAGGTGAGATAGTATTATGAAAGTCTACAAGTCCTTTCAAAATAGGCAAATTAGCTAATTTTTCTTAGTTTGCGCTCAATGCTTTTGCTGGCAGTGGCCTGTTCCTACTGGTTCCGTTTGTGCTGGCGATGGTGCTGCTAATGGCACAGCCACGTCAACTCCTCCCGTTGCTGTTATAGAGCCCCCACTGAACCATCTTCCTGAGCCTCACCATGAGACTACCAAAAGAAATACTAATCCAGGTGAGATTGCATTGCTTTGATGTAGCACTTTCTAATAACGAGTCTAGCTTCTAATATAGACGGTTTTTGCAGCGCAATTTTCTTCAGTACCAAAGAAGAGTAGATTGAAGATTGGAGAGTCCTCCGCTTTCTTCACATATGTCAAGTCTACTGTCAATGGAAATGGCTCAGTTCATCCAGGTATGGCTGAGAAGCTTCAAGCGGTGGCAAGTGAGGTGATCAACAACGCCAAACAAACACGAGGAGGTAGAGAGACTGAGAAAAACAAAGCTCAAGGAGAGAACTTTGTGAACGGCACGCTTGAGCGGTCACGCACGCTTCCAACACCAATGGAACTTCATGGCAGTAGGAGTTACCAAGAAGTTCCAAATTCTATTGAGCGGTCACGCACGCTTCCACCACCAATGGAACTTCACGGTACTAGGAGTTGTTACCAAGAAGGATCTATGGATGATGCCCGGGTTGCTGCTGCTAAGGATTCATCTCAGTTCCCTGCGCAAAATGCATATCCTTACTATATGCATGGTGTCATGAACCAAGTTATGATGCAATCAGCAGCCATGATGCCTCAGTATGGTCATCATCAACATCCTCATTGCCCACCTAATCATCTGAATGGAATGACAGGGTTTCCTTATTACCACCACCACCCTATGAACACATCGTTACAGAACGGTCATGTGCCTTTACAGAATGGTCAGATGCCTCCTATGGTTCATCATCATCATTCTTGGCCACAGGTGGGAAACCACCCGTCTCCTAACGAGGTGAGAGTGACTAAGCTTGACAGAAGAGAGGAAGCGTTGCTTAAATTTAGACGTAAGAGGAACCAAAGGTGTTTTGATAAGAAGATTAGGTATGTGAATAGGAAGAAGCTTGCTGAGAGGAGGCCACGTGTTAAGGGTCAGTTTGTTAGGAAGATGAACGGCGTAAATGTTGACTTGAACGGGCAGCCTGAACCTGACTCTGCTGACTATGATGACGAGGAAGAGGAGGATGAAGAAGAAGAGGAGAATCGGGACTCGTCTCCTCAGGATGATGCTCTTGGGACTTGAGAAACATGGGAGAACTGAAAACCTTGTTTGGTTTTATGATGAGAAACTTTGCTTGATGATGATGATCTATTGACACGGAAGGAATGATGCTGCTGCTCATGTTGGCTTAGCAGAGCATTGAAAATCACTATGTAGGTGTGGCTTAGCTCGTTGATAAAACATAAGATGTGTTTGATCTTGTTCACTCACTTTCAGTGAGTTATGTATAAACCTTTCTTCTCCTTCCAGCATTTTCCTTGGATTTTATTTTTCCTTTTGTTCCCTCGTCTGTTTAAACATGTATGACCACTCCATGGAAAGGTATAAAGAGACA
CDS Sequence
- >BnaA03G0408400ZS
ATGGATTTGAACGGAGAGTGTAAGGGAGGAGGAGGAGATGGGTTTATTGACAGAAGCAGAGTTAGGATTTTGCTTTGTGACAATGATCCCAATAGCTTGGGAGAGGTTTTCACCCTCCTTTCACAGTGTTCTTATCAAGTGACGTCAGTCAAATCAGCAAGGCAGGTGATTGATGCACTGAATGCAGAGGGGCCTGACATCGATATAATACTGGCGGAGATTGATCTCCCAATGGCCAAGGGTATGAAGATGCTAAGGTACATCACACGTGACAAAGATCTTCGGAGAATCCCTGTCATCATGATGTCGAGGCAAGACGAGGTCCCTGTGGTGGTAAAGTGCTTGAAGCTAGGTGCAGCTGACTACCTTGTGAAGCCTCTTCGGACCAACGAGCTTCTCAACTTGTGGACACACATGTGGAGAAGAAGACGCATGCTAGGACTTGCTGAGAAGAACATGTTGAGCTATGAGTTCGATCTCGTGGGATCTGACCCAAGTGATCCAAATACAAACAGCACCAACCTCTTCTCTGATGACACAGATGAGAGAAGTATTAGGTCCACCAATCCGCAGAGAGGAAGTCATCAGGAAAAGGAGTGGCCTGTTCCTACTGGTTCCGTTTGTGCTGGCGATGGTGCTGCTAATGGCACAGCCACGTCAACTCCTCCCGTTGCTGTTATAGAGCCCCCACTGAACCATCTTCCTGAGCCTCACCATGAGACTACCAAAAGAAATACTAATCCAGCGCAATTTTCTTCAGTACCAAAGAAGAGTAGATTGAAGATTGGAGAGTCCTCCGCTTTCTTCACATATGTCAAGTCTACTGTCAATGGAAATGGCTCAGTTCATCCAGGTATGGCTGAGAAGCTTCAAGCGGTGGCAAGTGAGGTGATCAACAACGCCAAACAAACACGAGGAGGTAGAGAGACTGAGAAAAACAAAGCTCAAGGAGAGAACTTTGTGAACGGCACGCTTGAGCGGTCACGCACGCTTCCAACACCAATGGAACTTCATGGCAGTAGGAGTTACCAAGAAGTTCCAAATTCTATTGAGCGGTCACGCACGCTTCCACCACCAATGGAACTTCACGGTACTAGGAGTTGTTACCAAGAAGGATCTATGGATGATGCCCGGGTTGCTGCTGCTAAGGATTCATCTCAGTTCCCTGCGCAAAATGCATATCCTTACTATATGCATGGTGTCATGAACCAAGTTATGATGCAATCAGCAGCCATGATGCCTCAGTATGGTCATCATCAACATCCTCATTGCCCACCTAATCATCTGAATGGAATGACAGGGTTTCCTTATTACCACCACCACCCTATGAACACATCGTTACAGAACGGTCATGTGCCTTTACAGAATGGTCAGATGCCTCCTATGGTTCATCATCATCATTCTTGGCCACAGGTGGGAAACCACCCGTCTCCTAACGAGGTGAGAGTGACTAAGCTTGACAGAAGAGAGGAAGCGTTGCTTAAATTTAGACGTAAGAGGAACCAAAGGTGTTTTGATAAGAAGATTAGGTATGTGAATAGGAAGAAGCTTGCTGAGAGGAGGCCACGTGTTAAGGGTCAGTTTGTTAGGAAGATGAACGGCGTAAATGTTGACTTGAACGGGCAGCCTGAACCTGACTCTGCTGACTATGATGACGAGGAAGAGGAGGATGAAGAAGAAGAGGAGAATCGGGACTCGTCTCCTCAGGATGATGCTCTTGGGACTTGA
Protein Sequence
- >BnaA03G0408400ZS
MDLNGECKGGGGDGFIDRSRVRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYEFDLVGSDPSDPNTNSTNLFSDDTDERSIRSTNPQRGSHQEKEWPVPTGSVCAGDGAANGTATSTPPVAVIEPPLNHLPEPHHETTKRNTNPAQFSSVPKKSRLKIGESSAFFTYVKSTVNGNGSVHPGMAEKLQAVASEVINNAKQTRGGRETEKNKAQGENFVNGTLERSRTLPTPMELHGSRSYQEVPNSIERSRTLPPPMELHGTRSCYQEGSMDDARVAAAKDSSQFPAQNAYPYYMHGVMNQVMMQSAAMMPQYGHHQHPHCPPNHLNGMTGFPYYHHHPMNTSLQNGHVPLQNGQMPPMVHHHHSWPQVGNHPSPNEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKKLAERRPRVKGQFVRKMNGVNVDLNGQPEPDSADYDDEEEEDEEEEENRDSSPQDDALGT