Gene Details:

  • Gene ID: BnaA03G0408400ZS
  • Suggest Gene Name: TIMING OF CAB EXPRESSION 1
  • Description: putative flowering gene
  • Species: Brassica napus
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.

Homologous

Sequences:

gDNA Sequence
  • >BnaA03G0408400ZS
    GTCATCTCCTTGTCCTAAAAATATCCCCGCGCGTCCTACCAACGCGCACTGTCGGAGAAACTTCCAATCTCCGCCGTCCATTCTCATCAACGCCTTCAGATTACCATCGTCCATTTCCCCTTCTCAGCGTCTCATTATTTGACCCCTGATTGACAAAAACAAATATCTCTCTCTCTCTCGTGTTTTTCTCACTTCTTGTCGGAAAGGAAACTCTCTCTCCTCAATCTCACCGCCGGCGTTGCTTCGGATCGCCGGTGATTTTGTTTGAGCTGCTATCGATTGTTGATTTCAACACTTTACCGGAGATAAAGAGTTTGACTTTTTGTTCTTAGATTTAGTTTTTGTTTCAACGTTTCGATGGCTATAAGATTAGGTTGGGGAGATAAAAAGAGTAACTTTTGGTTTGTTGTTGTGAAATGAAGTGACTTTGAATAGACAAATTAGGCGACTTTGTAGGGACACTGTACCGAAACCCTAAGTTCTGGTTTGGCCATGGAAGTATCATAGCACTTTCTCTTGTCTGGGTTTTATTTGTCTTAATCTTTTGTATAACCCTCTTTTTTTTTAATTTTTAGTGGAAAATTAGTTTCTTTGATTAGATATTTTTGTGGGTTTTGTGGGGTTTTGTCTGTAAATCTGATCATGGATTTGAACGGAGAGTGTAAGGGAGGAGGAGGAGATGGGTTTATTGACAGAAGCAGAGTTAGGATTTTGCTTTGTGACAATGATCCCAATAGCTTGGGAGAGGTTTTCACCCTCCTTTCACAGTGTTCTTATCAAGGTATATTTTATATTCAGTTTGATGATGGATTTGAGTTTTTTTTTTACTCTTTGTACAATGAGTATTGTGGATGGCTGTTTTTGTAGTGACGTCAGTCAAATCAGCAAGGCAGGTGATTGATGCACTGAATGCAGAGGGGCCTGACATCGATATAATACTGGCGGAGATTGATCTCCCAATGGCCAAGGGTATGAAGATGCTAAGGTACATCACACGTGACAAAGATCTTCGGAGAATCCCTGTCATCAGTAAGTTCCATTTTCTTTTTAAGTATTCATTTACTTTCTCTACTTAGCAAAGTTTTTTTTTAAATGCATGAGGGTTTGCTGTATGATAACTAATCTTATGATATTTTTCAATTTAAGTGATGTCGAGGCAAGACGAGGTCCCTGTGGTGGTAAAGTGCTTGAAGCTAGGTGCAGCTGACTACCTTGTGAAGCCTCTTCGGACCAACGAGCTTCTCAACTTGTGGACACACATGTGGAGAAGAAGACGCATGGTTTGTTTTTTTTCTATCTTTAGTTCTCTCTATGCGGTTAACTGTCATATTCCTTGTTATATGATTGAGCGTGTGTGTGTGTGTGTTTGTTTTGGCAGCTAGGACTTGCTGAGAAGAACATGTTGAGCTATGAGTTCGATCTCGTGGGATCTGACCCAAGTGATCCAAATACAAACAGCACCAACCTCTTCTCTGATGACACAGATGAGAGAAGTATTAGGTCCACCAATCCGCAGAGAGGAAGTCATCAGGAAAAGGAGGTGAGATAGTATTATGAAAGTCTACAAGTCCTTTCAAAATAGGCAAATTAGCTAATTTTTCTTAGTTTGCGCTCAATGCTTTTGCTGGCAGTGGCCTGTTCCTACTGGTTCCGTTTGTGCTGGCGATGGTGCTGCTAATGGCACAGCCACGTCAACTCCTCCCGTTGCTGTTATAGAGCCCCCACTGAACCATCTTCCTGAGCCTCACCATGAGACTACCAAAAGAAATACTAATCCAGGTGAGATTGCATTGCTTTGATGTAGCACTTTCTAATAACGAGTCTAGCTTCTAATATAGACGGTTTTTGCAGCGCAATTTTCTTCAGTACCAAAGAAGAGTAGATTGAAGATTGGAGAGTCCTCCGCTTTCTTCACATATGTCAAGTCTACTGTCAATGGAAATGGCTCAGTTCATCCAGGTATGGCTGAGAAGCTTCAAGCGGTGGCAAGTGAGGTGATCAACAACGCCAAACAAACACGAGGAGGTAGAGAGACTGAGAAAAACAAAGCTCAAGGAGAGAACTTTGTGAACGGCACGCTTGAGCGGTCACGCACGCTTCCAACACCAATGGAACTTCATGGCAGTAGGAGTTACCAAGAAGTTCCAAATTCTATTGAGCGGTCACGCACGCTTCCACCACCAATGGAACTTCACGGTACTAGGAGTTGTTACCAAGAAGGATCTATGGATGATGCCCGGGTTGCTGCTGCTAAGGATTCATCTCAGTTCCCTGCGCAAAATGCATATCCTTACTATATGCATGGTGTCATGAACCAAGTTATGATGCAATCAGCAGCCATGATGCCTCAGTATGGTCATCATCAACATCCTCATTGCCCACCTAATCATCTGAATGGAATGACAGGGTTTCCTTATTACCACCACCACCCTATGAACACATCGTTACAGAACGGTCATGTGCCTTTACAGAATGGTCAGATGCCTCCTATGGTTCATCATCATCATTCTTGGCCACAGGTGGGAAACCACCCGTCTCCTAACGAGGTGAGAGTGACTAAGCTTGACAGAAGAGAGGAAGCGTTGCTTAAATTTAGACGTAAGAGGAACCAAAGGTGTTTTGATAAGAAGATTAGGTATGTGAATAGGAAGAAGCTTGCTGAGAGGAGGCCACGTGTTAAGGGTCAGTTTGTTAGGAAGATGAACGGCGTAAATGTTGACTTGAACGGGCAGCCTGAACCTGACTCTGCTGACTATGATGACGAGGAAGAGGAGGATGAAGAAGAAGAGGAGAATCGGGACTCGTCTCCTCAGGATGATGCTCTTGGGACTTGAGAAACATGGGAGAACTGAAAACCTTGTTTGGTTTTATGATGAGAAACTTTGCTTGATGATGATGATCTATTGACACGGAAGGAATGATGCTGCTGCTCATGTTGGCTTAGCAGAGCATTGAAAATCACTATGTAGGTGTGGCTTAGCTCGTTGATAAAACATAAGATGTGTTTGATCTTGTTCACTCACTTTCAGTGAGTTATGTATAAACCTTTCTTCTCCTTCCAGCATTTTCCTTGGATTTTATTTTTCCTTTTGTTCCCTCGTCTGTTTAAACATGTATGACCACTCCATGGAAAGGTATAAAGAGACA
CDS Sequence
  • >BnaA03G0408400ZS
    ATGGATTTGAACGGAGAGTGTAAGGGAGGAGGAGGAGATGGGTTTATTGACAGAAGCAGAGTTAGGATTTTGCTTTGTGACAATGATCCCAATAGCTTGGGAGAGGTTTTCACCCTCCTTTCACAGTGTTCTTATCAAGTGACGTCAGTCAAATCAGCAAGGCAGGTGATTGATGCACTGAATGCAGAGGGGCCTGACATCGATATAATACTGGCGGAGATTGATCTCCCAATGGCCAAGGGTATGAAGATGCTAAGGTACATCACACGTGACAAAGATCTTCGGAGAATCCCTGTCATCATGATGTCGAGGCAAGACGAGGTCCCTGTGGTGGTAAAGTGCTTGAAGCTAGGTGCAGCTGACTACCTTGTGAAGCCTCTTCGGACCAACGAGCTTCTCAACTTGTGGACACACATGTGGAGAAGAAGACGCATGCTAGGACTTGCTGAGAAGAACATGTTGAGCTATGAGTTCGATCTCGTGGGATCTGACCCAAGTGATCCAAATACAAACAGCACCAACCTCTTCTCTGATGACACAGATGAGAGAAGTATTAGGTCCACCAATCCGCAGAGAGGAAGTCATCAGGAAAAGGAGTGGCCTGTTCCTACTGGTTCCGTTTGTGCTGGCGATGGTGCTGCTAATGGCACAGCCACGTCAACTCCTCCCGTTGCTGTTATAGAGCCCCCACTGAACCATCTTCCTGAGCCTCACCATGAGACTACCAAAAGAAATACTAATCCAGCGCAATTTTCTTCAGTACCAAAGAAGAGTAGATTGAAGATTGGAGAGTCCTCCGCTTTCTTCACATATGTCAAGTCTACTGTCAATGGAAATGGCTCAGTTCATCCAGGTATGGCTGAGAAGCTTCAAGCGGTGGCAAGTGAGGTGATCAACAACGCCAAACAAACACGAGGAGGTAGAGAGACTGAGAAAAACAAAGCTCAAGGAGAGAACTTTGTGAACGGCACGCTTGAGCGGTCACGCACGCTTCCAACACCAATGGAACTTCATGGCAGTAGGAGTTACCAAGAAGTTCCAAATTCTATTGAGCGGTCACGCACGCTTCCACCACCAATGGAACTTCACGGTACTAGGAGTTGTTACCAAGAAGGATCTATGGATGATGCCCGGGTTGCTGCTGCTAAGGATTCATCTCAGTTCCCTGCGCAAAATGCATATCCTTACTATATGCATGGTGTCATGAACCAAGTTATGATGCAATCAGCAGCCATGATGCCTCAGTATGGTCATCATCAACATCCTCATTGCCCACCTAATCATCTGAATGGAATGACAGGGTTTCCTTATTACCACCACCACCCTATGAACACATCGTTACAGAACGGTCATGTGCCTTTACAGAATGGTCAGATGCCTCCTATGGTTCATCATCATCATTCTTGGCCACAGGTGGGAAACCACCCGTCTCCTAACGAGGTGAGAGTGACTAAGCTTGACAGAAGAGAGGAAGCGTTGCTTAAATTTAGACGTAAGAGGAACCAAAGGTGTTTTGATAAGAAGATTAGGTATGTGAATAGGAAGAAGCTTGCTGAGAGGAGGCCACGTGTTAAGGGTCAGTTTGTTAGGAAGATGAACGGCGTAAATGTTGACTTGAACGGGCAGCCTGAACCTGACTCTGCTGACTATGATGACGAGGAAGAGGAGGATGAAGAAGAAGAGGAGAATCGGGACTCGTCTCCTCAGGATGATGCTCTTGGGACTTGA
Protein Sequence
  • >BnaA03G0408400ZS
    MDLNGECKGGGGDGFIDRSRVRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYEFDLVGSDPSDPNTNSTNLFSDDTDERSIRSTNPQRGSHQEKEWPVPTGSVCAGDGAANGTATSTPPVAVIEPPLNHLPEPHHETTKRNTNPAQFSSVPKKSRLKIGESSAFFTYVKSTVNGNGSVHPGMAEKLQAVASEVINNAKQTRGGRETEKNKAQGENFVNGTLERSRTLPTPMELHGSRSYQEVPNSIERSRTLPPPMELHGTRSCYQEGSMDDARVAAAKDSSQFPAQNAYPYYMHGVMNQVMMQSAAMMPQYGHHQHPHCPPNHLNGMTGFPYYHHHPMNTSLQNGHVPLQNGQMPPMVHHHHSWPQVGNHPSPNEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKKLAERRPRVKGQFVRKMNGVNVDLNGQPEPDSADYDDEEEEDEEEEENRDSSPQDDALGT