Information report for BnaA03G0310300ZS
Gene Details
|
|
Functional Annotation
- This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.
Homologous
- Brassica oleracea: XP_013622990.1, XP_013622989.1, Bo3g061400, XP_013586534.1, XP_013586533.1, Bo5g141290, XP_013620212.1, XP_013620144.1, XP_013620050.1
- Brassica rapa: XP_009134989.1, Bra001264, XP_009147048.1, XP_009147047.1, Bra029666
- Raphanus raphanistrum: RrC508_p5
Sequences
gDNA Sequence
- >BnaA03G0310300ZS
AAGAAGAATCGGCTCTGTTTCTAAGGATCTGTGTGTGTTTGGCTTTAAAGTTTTAGGATTCCACTTGAGAAGATAAGTAGTTCAGAAGATCTTGTCTTATACGGTGAGTTCTTTTCCTCCTTTCTCTCTCTGTCTTTTTAGGTTTTTTTGTAGTGTTCTTATTTTGATGTTAGCGTTTTATCACTGTTTCTGTCTGAAGGGTTGATCCCTCTGTTGTCTATATGTGTTGTGTTGCAATTGGATCTTCGATCTCTTCATGTTTTCTTTTGATTATTGGATTTTTAAGCTTTGTTCGTATGAGGATGATGATTGTGATGATAAAAAAGCTTAATTATTTATAAGAGTTATTGAGTTTTGAACTATAAATAAGTGAAAAAAAAACTGTAGATTTACTGACCTTTTGTGGGTTTTGGTCTCTGGCTATTGATATGAAATCTCTGACTACTGATCAGTGTTAAATGTTAATAGTAATCTCATTATTTTGATAAAAAAAAGTAATCTCATGATTATGCTTCTCCGTTGATTATTAATTCTCAACCTGTTTATAGACATAGTTCACAAACCTATATTCAGACATTCCATCTATGTCTTCTTCAAGGCTTTGCTATTATAAACCAAGTCTCTTTGTCCTTTATCTAATTAAAGAATACTTTTATTTTTACAGCAGAAATTAAAATCTGGTAAAGAAGATGGGTTACATGTGTGACTTCTGTGGTGACCAAAGATCAATGGTGTACTGCCGATCAGATTCAGCTTGTCTCTGCCTCTCCTGTGACCGGAGTGTTCATTCAGCAAACGCATTATCCAAACGACATTCTCGTACTCTTGTCTGCGAGAGATGCAATGCACAGCCTGCCACAGTTAGGTGTGTTGAAGAAAGAGTCTCACTCTGTCAAAACTGTGATTGGTCAGGCCACAACAACAACTCTACTTCTTCAAATGATCACAAGAGGCAAACCATAAGCTGCTACTCTGGTTGTCCTTCAAGCTCAGAGCTCGCCTCTATCTTGTCTTTTTGCTCGGAATTAGCAGGAGAATCGGCTTGTGAACAAGAGATGGGTATGATGAATATAGACGATGATGGTCAGACCAAAGAAAACTGTAATGAGGATAAGAAAGATGAAACCAGTTCTGCAGCACAAGCAACAAATGCATCATTTGCTAAGGTAACTTAATTTTCTTTCATCGTTAGCTCAACTAGAAAAGACCATGGCCATTGTGTCAGAGGTCCCCGGCTCAAATTACCTCTGAGAAAAAACTAATTAATATTACATGTTGTGGTTTCGGATCGGGGGATTACAAGCTTTGGCCCCCAACCTCATGATATTAAAAAAAAATACCCTCTAAAAAATTATCATGTTTCTTTTAACTAAAACCTCAAGTTCTTGTTATGGTTTGAAGGATGTTGGAGTGTGTGAAGATGACTTTTATGGGAACTTGGGTATGGATGAAGTTGACTTGGCTCTTGATAACTACGAAGAGCTCTTTGGAACAGCCTTTAACACCTCGGTACATCTCTTTGGACAAGGTGGAGTCGATAGTCTTTTCCAGAAACATCAACAAGCAGCTGCTCCTGAGGTATGTTTCCATGATTTATAAGCAAACAATTAAAGAAAGAGATTGCATCTTTGTGTGATTCTAATGATGATATTTGTTAATCCAGGGAGGGAATCTGGTGCAGCCAGCTGAGAGTAATGATGACTCGTTCATGAGTTCTAAAACGGAGCCAATCATTTGCTACACGTCTAAGCCAGCACATTCAAACATATCTTTCTCTGGAGTCACAGGAGAAAGCAGTGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCGTGCAGCTCACGGGTGAGCCACCATGGCATCCCCAAACATCACAGTCAGTAACCCGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTACGTTAACCTTTATTCAATACATGCATCAATGAAGTAAGTTGAGTGTTTTCTAAAATGAGAGATTGTGGTTTTTGTTTAGGTTTGATAAGAGAGTGAGGTATGCTTCTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTGTTAAAGCTGGTGAGGCTTATGACTACGACCCACTCACCCCAACCAGAAGCTATTGAGTGGATTCTTCTCCTTGAGAGGTAAACAATGTTAGATAAACATGGCGGAAAATCGAAACAAGAAAGGTTTTTGACTTATGGAGAGAGAGTTCTCAAGTCAGAAACAGGACTGATCTCTGGTTTGAGAAGTTACTAAGCTGATGATTAGTGTAAGCAATCATTCATTCTTGGGATTTAATCGGTTTTTTGGCCTCAAAAGCTTCAATTTCCATGAGTTTTGTTGTTCTCTTGGTAGTTAAAAAGTCAGGGAGATTTAGTTTAAGATTAAACAAATATGATTGTATATGACTTTCTTTCAATTTGTATGTATGCTCATAAATGATCTCTTTGTTATTTGCTCTATGGATTCTTGTAAATTAAAGACAGTATCCTGAACCTATCAGTCAAAGTTATGTGATAACACAAAGTCTCTAGGTTCACGTTTGACGTTTGTTGCAG
CDS Sequence
- >BnaA03G0310300ZS
ATGGGTTACATGTGTGACTTCTGTGGTGACCAAAGATCAATGGTGTACTGCCGATCAGATTCAGCTTGTCTCTGCCTCTCCTGTGACCGGAGTGTTCATTCAGCAAACGCATTATCCAAACGACATTCTCGTACTCTTGTCTGCGAGAGATGCAATGCACAGCCTGCCACAGTTAGGTGTGTTGAAGAAAGAGTCTCACTCTGTCAAAACTGTGATTGGTCAGGCCACAACAACAACTCTACTTCTTCAAATGATCACAAGAGGCAAACCATAAGCTGCTACTCTGGTTGTCCTTCAAGCTCAGAGCTCGCCTCTATCTTGTCTTTTTGCTCGGAATTAGCAGGAGAATCGGCTTGTGAACAAGAGATGGGTATGATGAATATAGACGATGATGGTCAGACCAAAGAAAACTGTAATGAGGATAAGAAAGATGAAACCAGTTCTGCAGCACAAGCAACAAATGCATCATTTGCTAAGGATGTTGGAGTGTGTGAAGATGACTTTTATGGGAACTTGGGTATGGATGAAGTTGACTTGGCTCTTGATAACTACGAAGAGCTCTTTGGAACAGCCTTTAACACCTCGGTACATCTCTTTGGACAAGGTGGAGTCGATAGTCTTTTCCAGAAACATCAACAAGCAGCTGCTCCTGAGGGAGGGAATCTGGTGCAGCCAGCTGAGAGTAATGATGACTCGTTCATGAGTTCTAAAACGGAGCCAATCATTTGCTACACGTCTAAGCCAGCACATTCAAACATATCTTTCTCTGGAGTCACAGGAGAAAGCAGTGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCGTGCAGCTCACGGGTGAGCCACCATGGCATCCCCAAACATCACAGTCAGTAACCCGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTTTGATAAGAGAGTGAGGTATGCTTCTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTGTTAAAGCTGGTGAGGCTTATGACTACGACCCACTCACCCCAACCAGAAGCTATTGA
Protein Sequence
- >BnaA03G0310300ZS
MGYMCDFCGDQRSMVYCRSDSACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNNSTSSNDHKRQTISCYSGCPSSSELASILSFCSELAGESACEQEMGMMNIDDDGQTKENCNEDKKDETSSAAQATNASFAKDVGVCEDDFYGNLGMDEVDLALDNYEELFGTAFNTSVHLFGQGGVDSLFQKHQQAAAPEGGNLVQPAESNDDSFMSSKTEPIICYTSKPAHSNISFSGVTGESSAGDFQECGASSSVQLTGEPPWHPQTSQSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLTPTRSY