Gene Details:

  • Gene ID: BnaA03G0208700ZS
  • Suggest Gene Name: PHYTOCHROME INTERACTING FACTOR 4
  • Description: putative flowering gene
  • Species: Brassica napus
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.

Homologous

Sequences:

gDNA Sequence
  • >BnaA03G0208700ZS
    TGGAACACCAAGGTTGGAGTTTTGAGGAGAATTACAATCTGTTCAATAATAGAAGATTTATAAGGTAATATAATGTTTAATCTATTTATTCATTAATTAAAAAGGACTATACAATAGTCCCTGAGTGTGTATATGTGTAGGCCACAAGATGAACTAGTAGAGTTGTTATGGCGAGATGGGCAAGTGGTTCAGCAGAGCCAAACTCATAGAGATCAAACTCAAGCTCAAGTTCAAGCTCAGAAACAGGATCAAGAAACCCTAAGATCCAACACTTTTCTTGAAGACCAAGAAACCGTCTCTTGGATCCAATACCCTCTAGATGAAGATCCATTTGAATCCGAAGACTTCACCTCACCTTTCTTCTCAACTATAGATCCCGTCCAGAGACCGGCTTCAGAGACGGTTAAGCACGAGGCCGGTCCTGTCCCTCCTGATCAAGTCATGCCTCCTCCTAAGTTTAGGCTAACGGGTTCATCATCAGGAGTCAGGGAACTAGGAAAAGAACAGTACTCGGTGATGACCGTTGGACCGAGCCACTGCGGGAGCAACCAATCTCAAACCGATCTCGATGTCTCATTGACTCATGATCCAAGTAAAACAATCGATGAGAGGCTCTACTCGAACGAAAATTCATCATCAGGTGGCTCCTCTGGCTGCAGCCTTGGCAAGAACAACAAAGAAATAGCTTGTGGAAGAAGCATCACAGCAGACCGTAAGAGAAAACATATAATGGACACTGATGAATCTGTGTCTCAGTCAGATGTATGCTTATTTTTTAACTCATGATGATAAGTTCTTGAAACGTTTTCTTAGTCCATTTCTCATTGTTCTTGAAACGTTTTACAGGCTATCGGTAATAACAAGTCGAACCAACGATCAGGATCAACCCGAAGAAGTCGAGCAGCTGAAGTTCATAATCTTTCCGAAAGGGTATTTTTCTCAATTCGTCTAATTAATTTTTTTTCATCGTAAATGTATTTTTTGCTATTACCAAATTTAAACTAATAGCATTTCAATAAATTTCATTATTATTTATTATAAACTAAAACATCTATTTTATCGGAGGGTGTATAATGTATTCAGCCAAAGATAATATATACTAAACTCTGTTTCTTTTGTTAATTAAATTAGAGGAGGAGAGATAGGATCAATGAGAGAATGAAGGCTTTGCAAGAACTAATACCTAACTGCATAAAAGTAAGTTATAAACTTGAATCTGATATGGGGACTAATTGATTAAGTTAAAAAGAATTTGGTGTCACTCGGGTTTGTTTTTCTTGTAGATTGATAAAGCTTCAATTTTGGAAGAAGCCATAGATTATTTGAAGTCACTTCAGTTACAGCTCCAAGTTATGTGGATGGGGAGTGGAATGGCTGGTGCTGCAGCGACTCCTATTATGTTCCCTGGGGTACAGCCTCCTCCACCGTTCATCCGTCAGCTGCAAAGCCCGGTACTGTTGCCACGATTTCCGGTTATGGACGGGTCTGCTATTCAGAACAATCCTGGTTAG
CDS Sequence
  • >BnaA03G0208700ZS
    ATGGAACACCAAGGTTGGAGTTTTGAGGAGAATTACAATCTGTTCAATAATAGAAGATTTATAAGGCCACAAGATGAACTAGTAGAGTTGTTATGGCGAGATGGGCAAGTGGTTCAGCAGAGCCAAACTCATAGAGATCAAACTCAAGCTCAAGTTCAAGCTCAGAAACAGGATCAAGAAACCCTAAGATCCAACACTTTTCTTGAAGACCAAGAAACCGTCTCTTGGATCCAATACCCTCTAGATGAAGATCCATTTGAATCCGAAGACTTCACCTCACCTTTCTTCTCAACTATAGATCCCGTCCAGAGACCGGCTTCAGAGACGGTTAAGCACGAGGCCGGTCCTGTCCCTCCTGATCAAGTCATGCCTCCTCCTAAGTTTAGGCTAACGGGTTCATCATCAGGAGTCAGGGAACTAGGAAAAGAACAGTACTCGGTGATGACCGTTGGACCGAGCCACTGCGGGAGCAACCAATCTCAAACCGATCTCGATGTCTCATTGACTCATGATCCAAGTAAAACAATCGATGAGAGGCTCTACTCGAACGAAAATTCATCATCAGGTGGCTCCTCTGGCTGCAGCCTTGGCAAGAACAACAAAGAAATAGCTTGTGGAAGAAGCATCACAGCAGACCGTAAGAGAAAACATATAATGGACACTGATGAATCTGTGTCTCAGTCAGATGCTATCGGTAATAACAAGTCGAACCAACGATCAGGATCAACCCGAAGAAGTCGAGCAGCTGAAGTTCATAATCTTTCCGAAAGGAGGAGGAGAGATAGGATCAATGAGAGAATGAAGGCTTTGCAAGAACTAATACCTAACTGCATAAAAATTGATAAAGCTTCAATTTTGGAAGAAGCCATAGATTATTTGAAGTCACTTCAGTTACAGCTCCAAGTTATGTGGATGGGGAGTGGAATGGCTGGTGCTGCAGCGACTCCTATTATGTTCCCTGGGGTACAGCCTCCTCCACCGTTCATCCGTCAGCTGCAAAGCCCGGTACTGTTGCCACGATTTCCGGTTATGGACGGGTCTGCTATTCAGAACAATCCTGGTTAG
Protein Sequence
  • >BnaA03G0208700ZS
    MEHQGWSFEENYNLFNNRRFIRPQDELVELLWRDGQVVQQSQTHRDQTQAQVQAQKQDQETLRSNTFLEDQETVSWIQYPLDEDPFESEDFTSPFFSTIDPVQRPASETVKHEAGPVPPDQVMPPPKFRLTGSSSGVRELGKEQYSVMTVGPSHCGSNQSQTDLDVSLTHDPSKTIDERLYSNENSSSGGSSGCSLGKNNKEIACGRSITADRKRKHIMDTDESVSQSDAIGNNKSNQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPNCIKIDKASILEEAIDYLKSLQLQLQVMWMGSGMAGAAATPIMFPGVQPPPPFIRQLQSPVLLPRFPVMDGSAIQNNPG