Information report for BnaA03G0112400ZS
Gene Details
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Functional Annotation
- Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization.;Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Actinidia chinensis: CEY00_Acc12139
- Brassica oleracea: Bo3g019340, Bo2g032410, Bo7g114310
- Brassica rapa: Bra006824, Bra020445, Bra011173
- Gossypium hirsutum: Gohir.A05G004280, Gohir.D05G005000
- Vitis vinifera: VIT_18s0001g07650
Gene Resources
- Pfam: PF00041 PF07227
- UniProt: A0A816V1I3
- EMBL: HG994357
- AlphaFoldDB: A0A816V1I3
- OMA: LFVITPC
- InterPro: IPR032881 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF7
- SMR: A0A816V1I3
Sequences
gDNA Sequence
- >BnaA03G0112400ZS
TGTTCATTTTATACATGTTCTTTAAGAGAATGAGAGCTTCATGGTTTTGCATTTTGGCTGTTTAAATATTTTAATTTTGGAATAAAATAATTTGAAAAATAAAAATCTGAGCTTTATCGATCCCTTGTTTTTTTCATAGAACTTTGTTGTGAACTTGTGATGGGTTCTTAACTTTTAACTTATGTTTTATTCTTTGTCGGAAAACTTATCTGCAGCTCTCAAAGATCTGGCGTTTTGATAGTAATGTGGGCCCAGAAGAAGACATGGATCCTTCTTCATTTCAAGGTACGAGTTCTTCTTCATGTCGACGTGAACGTCTTTTGTCTTCTCACTGTTCTACTTTCATGCGTTTATTGGTTGATGCTTTTAGTAGGTCGCTAACACGACGTCGTTTTAATTGTCGGAACTGTTTCATATATGAACTTAAACGCTTTATTTCTCGCATTGGATTCGTCGTTCGTCGTCATTGTTGAAATTTTTGGTTCATGGGTTGTTGAGACTTATCGTTTTCGTTGACAAAGTTTTTAAACTTTGAATGATCTTTTACCCATTAAAAATCACAAATCGATCCCCCTTTTTGTTCTTCTTCCCACACTTGTTCTAGGGTTAAAGTGTTGTGCTTTTCCCTTTGCAGGTGTCGTGTGCACTGAGTTTCCTAAAAAGAAAGGTTTGAGTGTAAGCGAGAGAAGAGAACTGATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCGGAGCTTTTAAACTCGTGGAGCCGGGACGAGATTATGAAGATCATATGCGCGGAGATGGGTAAAGAGAGGAAGTACACTGGTCTAGCCAAACCAAAACTCATTCAAAACCTACTGAACCTCGTCTCTCGTCCTCTCGGTGAAACCTCTTGTCTTGACCGTAAAATCTCGAGGAGGAAGAGACAGAAGACGACTACTAGTTACATCATCTGCTGCGAGAATTTAGCTTGTAGAGCTGCGCTCGGAAGTGAAGATACCTTTTGTAGAAGATGTTCTTGCTGTGTTTGTCAGAACTTTGATGATAACAAAGATCCGAGTCTATGGATTGCTTGTGAGGGTTGTGGTTTGTCTTGTCATTTGGAGTGTGCTTTCAAGGAAGATGGGTATGGGATTGGGTGTAATGATGATGTAAGAGGTCTTGATGGTAGGTTTCATTGCGTGTTTTGTGGCAAAGATAATGATTTGCTTGGGTAAGATTCTTGTAAGAAATATGAAAAAGACATCTGTTTGGAGAGTGTAGTGTAATAATATGTGTGTGAACTTACAGATGCTGGAGGAAGCAAGTGAAGGTGGCGAAAGAGACTAGGCGTGTAGATGTTCTTTGTTACCGTGTTTGCTTAGGACAGAAGATGTTGAGAGGTACAAGGAGGTATCAGAATCTGTTGGAACTCATGGATGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTAGTGAGTTGGGAGATGAAGATGGCTCGAGGTATCGTCAATAGATTTGATTCGGGATCACAAGTTCAGAAGCTGTGCTCTCTTGCAATGGAAGCTCTTGACAAAATGGTCTCACCACCACCAGAATCTGTTTCAAGACAAGGTTAGTTTTCTGCTTAGACATTACTTTTGTTTTGAAGTGTGTTCTGACTTTAGTTCTGGTTAGGTGACAAGATGAGCGCGAGAGTAGAAGAGGTTCAAGCAAGATCAGTCAATGTGAGATTAGACTCCGAGGAGCCGTCTTCTTCTTCGCAAAACCGGGTCACAGGTGTGAAGGATGATGGAGAGGAAGCAGGGAACAGGCAACGCCATTTGACGAACTCTAGCAGTGGACTTTGTAGTAGTAATCCATCTTTGGCTGAAGATGAATCCAACAATGTCAGTAAAAGCTGCTGCAAAGAAAATAGTGACAATAACAACGCTGAACACTATAGTGCAGGAGAAGTAGAATCTGAGATTGAAGAGGAGAGGGTCTTAAAAAGGAAAGTCAACGAGATAGAGAGAAGAGACTTGTTTGTAATAACACCCTGCAAGAGAGACGCATTTAACGGCAAGCAAGGAGGGAATAAAAGATCCAAATCAAGAACATCAACCAAGAAACCTGAGACCAATGTAGCAGAAAATGGAGTAGGAGGAGATAAAGACTTGGGTCATGTAGTGAAGACCACTAGATGTTTAGAGCAAGAAGGGCATATAGACAAGAGTTTCAGGGAAAGTTTCTTGACATGGTATAGCTTAAGAGCTACTCATAGAGAAGTTAAAGTAGTGAAGGTTTTTGTAGAGACTTTCAAGGATGATCTGTCTTCTTTGGGACAACAGCTTGTGGATACATTCTCAGAATGTATACAGAGCAAGAGATCATCAACAACTGGTGTTGTACCTGCTGGAATCTGCCTCAAGTTCTGGCATTAA
CDS Sequence
- >BnaA03G0112400ZS
ATGTTCATTTTATACATGTTCTTTAAGAGAATGAGAGCTTCATGGTTTTGCATTTTGGCTCTCTCAAAGATCTGGCGTTTTGATAGTAATGTGGGCCCAGAAGAAGACATGGATCCTTCTTCATTTCAAGGTGTCGTGTGCACTGAGTTTCCTAAAAAGAAAGGTTTGAGTGTAAGCGAGAGAAGAGAACTGATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCGGAGCTTTTAAACTCGTGGAGCCGGGACGAGATTATGAAGATCATATGCGCGGAGATGGGTAAAGAGAGGAAGTACACTGGTCTAGCCAAACCAAAACTCATTCAAAACCTACTGAACCTCGTCTCTCGTCCTCTCGGTGAAACCTCTTGTCTTGACCGTAAAATCTCGAGGAGGAAGAGACAGAAGACGACTACTAGTTACATCATCTGCTGCGAGAATTTAGCTTGTAGAGCTGCGCTCGGAAGTGAAGATACCTTTTGTAGAAGATGTTCTTGCTGTGTTTGTCAGAACTTTGATGATAACAAAGATCCGAGTCTATGGATTGCTTGTGAGGGTTGTGGTTTGTCTTGTCATTTGGAGTGTGCTTTCAAGGAAGATGGGTATGGGATTGGGTGTAATGATGATGTAAGAGGTCTTGATGGTAGGTTTCATTGCGTGTTTTGTGGCAAAGATAATGATTTGCTTGGATGCTGGAGGAAGCAAGTGAAGGTGGCGAAAGAGACTAGGCGTGTAGATGTTCTTTGTTACCGTGTTTGCTTAGGACAGAAGATGTTGAGAGGTACAAGGAGGTATCAGAATCTGTTGGAACTCATGGATGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTAGTGAGTTGGGAGATGAAGATGGCTCGAGGTATCGTCAATAGATTTGATTCGGGATCACAAGTTCAGAAGCTGTGCTCTCTTGCAATGGAAGCTCTTGACAAAATGGTCTCACCACCACCAGAATCTGTTTCAAGACAAGGTGACAAGATGAGCGCGAGAGTAGAAGAGGTTCAAGCAAGATCAGTCAATGTGAGATTAGACTCCGAGGAGCCGTCTTCTTCTTCGCAAAACCGGGTCACAGGTGTGAAGGATGATGGAGAGGAAGCAGGGAACAGGCAACGCCATTTGACGAACTCTAGCAGTGGACTTTGTAGTAGTAATCCATCTTTGGCTGAAGATGAATCCAACAATGTCAGTAAAAGCTGCTGCAAAGAAAATAGTGACAATAACAACGCTGAACACTATAGTGCAGGAGAAGTAGAATCTGAGATTGAAGAGGAGAGGGTCTTAAAAAGGAAAGTCAACGAGATAGAGAGAAGAGACTTGTTTGTAATAACACCCTGCAAGAGAGACGCATTTAACGGCAAGCAAGGAGGGAATAAAAGATCCAAATCAAGAACATCAACCAAGAAACCTGAGACCAATGTAGCAGAAAATGGAGTAGGAGGAGATAAAGACTTGGGTCATGTAGTGAAGACCACTAGATGTTTAGAGCAAGAAGGGCATATAGACAAGAGTTTCAGGGAAAGTTTCTTGACATGGTATAGCTTAAGAGCTACTCATAGAGAAGTTAAAGTAGTGAAGGTTTTTGTAGAGACTTTCAAGGATGATCTGTCTTCTTTGGGACAACAGCTTGTGGATACATTCTCAGAATGTATACAGAGCAAGAGATCATCAACAACTGGTGTTGTACCTGCTGGAATCTGCCTCAAGTTCTGGCATTAA
Protein Sequence
- >BnaA03G0112400ZS
MFILYMFFKRMRASWFCILALSKIWRFDSNVGPEEDMDPSSFQGVVCTEFPKKKGLSVSERRELIHALSKQPEEASELLNSWSRDEIMKIICAEMGKERKYTGLAKPKLIQNLLNLVSRPLGETSCLDRKISRRKRQKTTTSYIICCENLACRAALGSEDTFCRRCSCCVCQNFDDNKDPSLWIACEGCGLSCHLECAFKEDGYGIGCNDDVRGLDGRFHCVFCGKDNDLLGCWRKQVKVAKETRRVDVLCYRVCLGQKMLRGTRRYQNLLELMDEAVKKLEGDVGPLVSWEMKMARGIVNRFDSGSQVQKLCSLAMEALDKMVSPPPESVSRQGDKMSARVEEVQARSVNVRLDSEEPSSSSQNRVTGVKDDGEEAGNRQRHLTNSSSGLCSSNPSLAEDESNNVSKSCCKENSDNNNAEHYSAGEVESEIEEERVLKRKVNEIERRDLFVITPCKRDAFNGKQGGNKRSKSRTSTKKPETNVAENGVGGDKDLGHVVKTTRCLEQEGHIDKSFRESFLTWYSLRATHREVKVVKVFVETFKDDLSSLGQQLVDTFSECIQSKRSSTTGVVPAGICLKFWH