Information report for BGIOSGA012029
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Arabidopsis thaliana — AT3G49600
Gene Resources
- Pfam: PF00443
- UniProt: A2XDG4
- EMBL: CM000128
- AlphaFoldDB: A2XDG4
- OMA: GSCEEMP
- InterPro: IPR000626 , IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50053 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- SMR: A2XDG4
- CDD: cd01795 , cd02668
- STRING: 39946.A2XDG4
- HOGENOM: CLU_010287_0_0_1
Sequences
CDS Sequence
- >BGIOSGA012029
ATGAGCAGGCCAAACACACGAAATAAGAGCAAGAGGCCGCGGGCTGATGACTGCGAGAGCCCGTCTGCTGTTTTCAAGAAGATACATTCCACTGGAGCAATCACAAAAGGCGATATTAAACAACTTTATATGGTGTGGAAACCTGTTTGTCATGGTTGCCATGGGAACTCCAAGGACTCACCCAATTGTTTCTGCGGGTTGATCCCTGCTGCTAATGGGGTGAGGAAATCTGGCCTGTGGCAGAGAACAAACGAGATCATTCGCGCCCTTGGTCCTAACCCGTCGACGGATCTTCGTGACTCCACTGAGACGCCTGCTGGATTGACTAACCTGGGCGCTACCTGTTATGCAAACAGCATACTGCAGTGCCTTTACATGAACACCTCCTTCCGCTTGGGCATTTTCTCTCTAGAGCCCGACATCTTGAAGATGCACCCTGTGCTGGATCAGCTTGCTCGGTTATTCGCTCAGCTACACTCCAGCAAAATGGCTTTCATTGATTCGGCACCTTTTATAAAAACCTTGGAATTAGATAATGGTGTCCAGCAGGACAGCCATGAATTCCTCACATTATTTTTGTCTTTGCTCGAGGGTTCACTAAGTCATTCCAAGGTTCCAGGGGCTAGAACCATTGTGCAGCATTTGTTCCGTGGAAGTGTGTCCCATGTTACTCGGTGCTCATCATGTGGAAGGGATTCCGAAGCATCTTCAAAGATGGAAGACTTTTACGAACTGGAGCTTAACATTAAAGGTTTAAATAATCTAGAACAAAGTTTGGATGACTATTTGAGTACTGAGGCACTGGATGGAGAGAACCAGTACTTCTGTGAGTCATGTCAGAAAAGGGTAGATGCCACTCGTTGCATAAAACTTCGCTCACTTCCTCCTGTTGTTAATTTTCAGCTGAAACGCTATGTATTCCTCCCAAAGACAACAACAAAGAAAAAGATTTCTTCGGCATTCAGTTTCCCAGGACAGCTAGATATGGGGAAGCGGTTATCCAATCCTTCATCTAGTTATACGTATGGCCTGTCTGCTATTTTGATCCACAAGGGTAGTGCTGCCAATAGTGGGCACTATGTAGCACATGTAAAGGACGAAAGCAATGGTCAATGGTGGGAGTTTGATGATGAGCATGTATCCAAGCTTGGTCTTCATCCCTTTGGTGAAAAACCAGGCAAATCATCCAATAAAACTGATCAGAAACCCCAGGGTAGTTCTACAGCGGATTCTGTTACGAATGATGACAACAATAGCTGTCATGAGGCTGCATTCACTTCTACTATGGAAGAGATGTTTTCTTCTACAGATGCTTATATGCTGATGTACAAACGCATTGCTAAGGATGAGAATGGTATCGAAAGCAATAATATAAGCAGTAATAATTCACTCCCACACCATTTTGTGGATGAAATTGATGAACGTAATACATCATATGTAAAGGAATGTGAAGAATACGAAAGCAAGAAAGACGTCCATTTGGCATATATAACAGAGAGGCGCCAAGAAGTAAAATCTGTTCTGACAGAAGCGCCTGCAACTCCAGAGGAGGATTCTTATTTTTGGATTTCAACAGATTGGCTTCGCCAATGGGCGGACAACGTTAATCCTCCCTCACCTATTATAACTGGAGTTCGTGTCCACAGCTCTATTGACAACAGTCCGATTCAATGTGAACATGGAAAAGTTCCAGCGTCAAAAGTTACATCCATGAAACGACTATCAGCTGGAGCTTGGCATAAGCTATTTTCTAAATATGGAGGGGGGCCAACATTGAGCAGTGATGATTTTTGCATGGAGTGCCTTAAGGATGGAGCAAAAAATTCAGTATCTGCAGATGTTTATCGTGATCGGAAGGCATCATTAAGAAGTATTGCAGAAGCAGCGCTTGCTGGAAATAATCCAGATGGTCCTTTGTACTTTGTTTCCAGGCCATGGTTGACCCAATGGTTGCGCAGAAAAAATGTGGATATCCCTTCAGATGCTGACAGTGGACCAACAATTGCTCTAACGTGCACCCATGGAAATCTTCTTCCGGAACATGCTTCAGGCGCAAAGCGGGTCACTGTGCCAGAGGACCTATGGTTATTTCTCTATGAAACCAGTGGAATGAAGATTGATGATATTGTGACTTTTCCGTCAGATAGTCAACCATGCGGAATTTGTAGCCAGCAATTATCAGTTGTTGCTTCTGTTGAGGATAATCTTAGAGCGGTGAAACTCAAGCAACGACAAAGCCATGAAAAGTTAACTTCTGGGAAAAGTCTTGCACTTCATCCTGGGCAAAAATATTATTTAGTTCCTTCCTCATGGTTGTCAGAGTGGAGAGCTTACATTACAGCGACTGGGAAAAATATTTCTTCGTTACCAGAACCTCAATCTCTTGAAGTTACCATCAATTCACTAATCTGTGAAAAGCATTCAAGATTGTTGCAAAGGCCCTTGGATCTAGTTTGCAAGCGTGGGACTATCACTCAGAAAGCATCAAATACTGATGGATTAACAATGATATCAGAATCTGATTGGATTTTATTCTCTGAAGAGTGGAATGTAGCACATGGAAAAGGTTTATGTGCTGAAATTGTTTTTAGCAAGAGCTCTCAAGATAACCTGCAGTCATCTGAAGCAGTGCCAATTTTGGTTGAAGATCTGGACCAGTCAACAAATGATTTAAGCAATGACTTGGGGGGCAGAGAACCCTATGTCAGAACTGATCCTGAGGTTTGTGAAGAATGTATTGGAGAAAAAGAGAGCTGTGCATTGGTTGAGAAGCTCAATTATCAGAATGAAGATATCCAGGTTTATCTTGTCCGTGGTAAAGAAGCGCCAAAGTCAATTAGAGAGGCATCGGCAGCTGTTCCTGTACCAGATCGTAGGACTTCAAAGCGTTCCCGGAGAACAACCTCAGGAAATTCGATCAGTTTGAAAGTCTCTGGTTCTACAACCGTATATCAGTTGAAACTCATGATATGGGAATCTTTAGGGATTGTTAAGGAGAACCAGGAGCTTCACAAAGGCTCTGTTGAGATTGAAGATGATTTTGCTACTCTTGCTGACAAGTGTATTTTTCCTGGAGATGTTCTATGGGTTAAAGATTCCGAAATCTACGAGAACCGTGACATAGCAGATGAAATTTCGGAGCAGAAGGTTGTAGTACAGACTGAGGAAGGCTTTCGTGGGACTCTGTTGACATCTAGTGCTTCAGCTCAGCTTTGCCAGGATATATCATTTAGCGATTGA
Protein Sequence
- >BGIOSGA012029
MSRPNTRNKSKRPRADDCESPSAVFKKIHSTGAITKGDIKQLYMVWKPVCHGCHGNSKDSPNCFCGLIPAANGVRKSGLWQRTNEIIRALGPNPSTDLRDSTETPAGLTNLGATCYANSILQCLYMNTSFRLGIFSLEPDILKMHPVLDQLARLFAQLHSSKMAFIDSAPFIKTLELDNGVQQDSHEFLTLFLSLLEGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSAFSFPGQLDMGKRLSNPSSSYTYGLSAILIHKGSAANSGHYVAHVKDESNGQWWEFDDEHVSKLGLHPFGEKPGKSSNKTDQKPQGSSTADSVTNDDNNSCHEAAFTSTMEEMFSSTDAYMLMYKRIAKDENGIESNNISSNNSLPHHFVDEIDERNTSYVKECEEYESKKDVHLAYITERRQEVKSVLTEAPATPEEDSYFWISTDWLRQWADNVNPPSPIITGVRVHSSIDNSPIQCEHGKVPASKVTSMKRLSAGAWHKLFSKYGGGPTLSSDDFCMECLKDGAKNSVSADVYRDRKASLRSIAEAALAGNNPDGPLYFVSRPWLTQWLRRKNVDIPSDADSGPTIALTCTHGNLLPEHASGAKRVTVPEDLWLFLYETSGMKIDDIVTFPSDSQPCGICSQQLSVVASVEDNLRAVKLKQRQSHEKLTSGKSLALHPGQKYYLVPSSWLSEWRAYITATGKNISSLPEPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQKASNTDGLTMISESDWILFSEEWNVAHGKGLCAEIVFSKSSQDNLQSSEAVPILVEDLDQSTNDLSNDLGGREPYVRTDPEVCEECIGEKESCALVEKLNYQNEDIQVYLVRGKEAPKSIREASAAVPVPDRRTSKRSRRTTSGNSISLKVSGSTTVYQLKLMIWESLGIVKENQELHKGSVEIEDDFATLADKCIFPGDVLWVKDSEIYENRDIADEISEQKVVVQTEEGFRGTLLTSSASAQLCQDISFSD