Information report for A4U43_C01F580
Gene Details
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Functional Annotation
- Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Actinidia chinensis: CEY00_Acc12139
- Juglans regia: Jr11_25360
- Musa acuminata: Ma04_g02200, Ma05_g19340, Ma09_g13240, Ma03_g04950
- Prunus avium: Pav_sc0000359.1_g500.1.mk
- Prunus persica: PRUPE_1G084700
- Saccharum spontaneum: Sspon.04G0018260-1P
- Setaria italica: SETIT_016427mg
- Setaria viridis: SEVIR_4G262600v2, SEVIR_1G084900v2
- Vitis vinifera: VIT_18s0001g07650
- Zea mays: GRMZM2G425774, GRMZM2G166162
Gene Resources
- Pfam: PF07227
- UniProt: A0A5P1FKP0
- EMBL: CM007381
- AlphaFoldDB: A0A5P1FKP0
- OMA: RINLCFR
- InterPro: IPR032881 , IPR044514
- PANTHER: PTHR46286 , PTHR46286:SF2
- OrthoDB: A0A5P1FKP0
Sequences
gDNA Sequence
- >A4U43_C01F580
CACAGTTGCTTGCGAGGTTTTTTGCTGCTAACTTCCTCCCCAAAGGTATGGACTAACTGCTCCGCAAGACTATGAGGATCATCAGAAAATGTGTCAATAAACACACCAACTAGCATTGCATTCTTTATTGTTGCCCGGATACTGAGCCATGTGAGAAACTCCATCCTGAAGTTTTTCTCTATATACCCATCACATTCCAACTTTCTAATCGCATTTACGGTCTTCCTGAACACTGTATCTATATAATTCTCTTCATTTTTCACTGTTTGCAGTGCACCATGCTCAAGTTTCCCATCAGCTGAATTATCATTCTCTCTCTGGTTCTCAGGCAACTCATTCAAGTCTATCATCACTGTTTTCTTCCTCTCAGACTTGTCTTCTTTTAGCACTGAAACTTGAGCACTGATACCTAGTTCCGGGTTACTTTCATTAGTTGCTTGAGCTTCACAATTCTGATCTTTTAGCACTGAAACTTGAGCACTGATACCTACTTCCGGGTTACTTTCATTAGTTGCTTGAGCTTCACAATTCTGAGGTTCAATTGCCTCATTTGTTGGTTCAGCTTCACAATTCTGGGTCTCCGTCCCGACATTTGCTGCTTCAGCTTCTCTATTCTGGGGTTTTATTGCCTCACTTGTTGCACCAGCTTCACAATGCTGTAATTCAATGTGATTGAACCGTGGAGGTGTGAGAGGCAGCGAGTCCAATAAATTTATTGCATGAGAACAAAGGGTTAGGACTTCATCATAAACAGGAAGGCGCCGGACTAGTGAATGAGACATATTGAATGGAAGGTTGTTTAGTACTCCAACTTCATCCTCCAACTTCCTCTTAATAGAGCCTACAGCCTCGTGGAGGTTTAGGTACTTCTCAGTTGAGCTGAGGATCTTGTGGCTCAGGTAGATCCTGCTGCAGAGATCATTCACTCTTCGGACATCCTTTGCCTCCATCAGCAACTTTCTACAACAACTGCAGGGGAACACAGATAATTATAAATAAAAATATACAATAAAGCCCTCTGAAGGTTATCTAAAAGCAGAAATGAGGATAGAAGTAAAACAAATATGGTCTCAAGCTGAATAAGAAAACAGCCAGTCGATGTGATAATCACCAGTGTAGAGTAGTTTTCCAATAATTTCTTCGTAACTATTACTATGCAAAGGTGATCAATTAATTAAATTAAACTGGAAATGAATAAGAAACAAGAGAAGGTATCTGGCCATGGGAGCACCATTCCAGAGCACCCTTCCCGAAACTATGGAACATATAAAAGGACGTCATCAGATCTTTTGAAGTATAACGTGTCGAACAACATTCTATCCCTTTTCGGATAAAACATGATTGATTACTAGACCACATGGCAGTAAGAAGGCTATGCATGCTCAAGACAGAACCACAGTAAGACAACTGACGGGAGCATGGTTGTTTGTTCTGTGAAGATAATAAAGGGCCTTCCGCTTCTTTTTTATTAGTTGGATAACGACTTAAAAGGGAAAAAATCTGCACTAGCATGAAACAAGAATCCAGGTTGATATTTAGGACTTCTGAGACTACTAAGAACTTCAGTCCATCTGCCAAAATATTCAAAGAAGTGGACAAGACACCAAATTCAAAATAACTGAGAGCTCAGGGCTAGATACTGAAGTTACCTGATCAGATCATTCACATTTCCACAATTTCCACACTGGTAGCTCCCATCTAGCTTTGTGCCTCTTCTTTTTAAATCTTTGCCTTCCCTTTCATCCTTAAGGGCACACTCAAGATGACAAGATAAGCCGCATGTATTATCCTGTGAACTAGTCTTCGACTCACATACTAACCAAAAACTTGGATTCTTATTTTCATCATAGTTGCTACACATGTAACATGAACACCGCTTGCAAAAATTATCCATTAACTTCATTTCAGCCCTGCAGGCTGAGTTATCACAATATTTAACCGAAGGCAGGGGAGACGGGTTGCAACTCTTTCTTTTGCTTCTAACCGAAGTTGGAGCATTAAGTGGAGGTAAAGGCAGGGTTGAGGATGGAGCAACAAGATCAGTAGAAGCAACTGCATGATTTTCATTTTCACTGATCTTATCAGAGATGATACCACAAAGGTGATTTATAAGCAGTCGCTTAGGTATACTGGTAAATTTTCTCTCCCTTCCGTTCTCAATATTGATGAGCTCTATTATCTCATTTCTTTTCAAGGAACGAAGTCTCTCTTGTGCTTTTTCAGAGCTGTGACAGAGCTGTTCAATAAATTCTTCCTTCTCTTCCTGAGTCATTTCTGGGAATTTGCTAGGACTAAGTATATACTCTGAAAATTAAAGTATATTAGTCCAAAAGTGACTGGAGAATATTTAAGGCTATAAGCACGCAATAACAACAGATAAATAGTAAAATATGATACAAACTATCCTTTCCACTCTAGCTCTCTAGAAGAGTCTCTGCAATGTATTGGGCATGAGTTTCAACCATAACAAATCTATACCAAAATGAATATCATAAATTTTGAGACCCATTTAACAAATTGGCAAATCTTCACTCAGAGAAGCTCTAAGCTAAAGACACTTGAGCCATATAATGAGTGTAACCCTTGTATAGTCATGAACTAGAAATCCCCAAAGGATGAAGATGTTCAAGTATACCGACTTGACATAGTGCATAACAATGGGAAGGATGTTACTGAGCTTTTTAAAAACAATTTTCCTAAGAACTTTAAATTTTAAAACCATAAACAATGTCACTTTGTACAACATGTTCTTATTTCACTGCATGTTCTGTCAAACAACTTTCTTGATTATATGCACGCAGAATAGAAATGGAGCAAAATTAAGGAAATTGGTTACTGATATTTATTAAAAACACTCATAGATAAGCCACCAAAATATAAGTGGAATCTAACACCCAACCAGCAACTATTTAACCTCCTACTCATTCCAAAAGCACATATATGATACAAGAAATGTAAGGCCATTAATTGTTTTGTAAGAAAAAAATGGAATGCCATGTTAAGTTGAAAATAAACAAGAATACCATGGCAGATTTCAGTTGCTAAAAGTATCAAGTTACGAAAGCCCATGAATATAATTGATATAAGTGATCTTAAAGGTCTCTACACAAAAGATAATCTTCCAATGCCCATTAAAAAAATCACTTTTTTCACCAACACAAATACAATCTAATTTTACTATTTAAGACACTTACCGCAGCAACTATCAACACCAATGGGAGAAAAAAAGCTGCAAAAGTAGAGACTTATGCGAATGTTAAAGACCTACCAGGGAACCTAAGTCCCATTGAAGATGAAGCCTGTTCAGTCGTCATCAT
CDS Sequence
- >A4U43_C01F580
ATGATGACGACTGAACAGGCTTCATCTTCAATGGGACTTAGGTTCCCTGAGTATATACTTAGTCCTAGCAAATTCCCAGAAATGACTCAGGAAGAGAAGGAAGAATTTATTGAACAGCTCTGTCACAGCTCTGAAAAAGCACAAGAGAGACTTCGTTCCTTGAAAAGAAATGAGATAATAGAGCTCATCAATATTGAGAACGGAAGGGAGAGAAAATTTACCAGTATACCTAAGCGACTGCTTATAAATCACCTTTGTGGTATCATCTCTGATAAGATCAGTGAAAATGAAAATCATGCAGTTGCTTCTACTGATCTTGTTGCTCCATCCTCAACCCTGCCTTTACCTCCACTTAATGCTCCAACTTCGGTTAGAAGCAAAAGAAAGAGTTGCAACCCGTCTCCCCTGCCTTCGGTTAAATATTGTGATAACTCAGCCTGCAGGGCTGAAATGAAGTTAATGGATAATTTTTGCAAGCGGTGTTCATGTTACATGTGTAGCAACTATGATGAAAATAAGAATCCAAGTTTTTGGTTAGTATGTGAGTCGAAGACTAGTTCACAGGATAATACATGCGGCTTATCTTGTCATCTTGAGTGTGCCCTTAAGGATGAAAGGGAAGGCAAAGATTTAAAAAGAAGAGGCACAAAGCTAGATGGGAGCTACCAGTGTGGAAATTGTGGAAATGTGAATGATCTGATCAGTTGTTGTAGAAAGTTGCTGATGGAGGCAAAGGATGTCCGAAGAGTGAATGATCTCTGCAGCAGGATCTACCTGAGCCACAAGATCCTCAGCTCAACTGAGAAGTACCTAAACCTCCACGAGGCTGTAGGCTCTATTAAGAGGAAGTTGGAGGATGAAGTTGGAGTACTAAACAACCTTCCATTCAATATGTCTCATTCACTAGTCCGGCGCCTTCCTGTTTATGATGAAGTCCTAACCCTTTGTTCTCATGCAATAAATTTATTGGACTCGCTGCCTCTCACACCTCCACGGTTCAATCACATTGAATTACAGCATTGTGAAGCTGGTGCAACAAGTGAGGCAATAAAACCCCAGAATAGAGAAGCTGAAGCAGCAAATGTCGGGACGGAGACCCAGAATTGTGAAGCTGAACCAACAAATGAGGCAATTGAACCTCAGAATTGTGAAGCTCAAGCAACTAATGAAAGTAACCCGGAAGTAGGTATCAGTGCTCAAGTTTCAGTGCTAAAAGATCAGAATTGTGAAGCTCAAGCAACTAATGAAAGTAACCCGGAACTAGGTATCAGTGCTCAAGTTTCAGTGCTAAAAGAAGACAAGTCTGAGAGGAAGAAAACAGTGATGATAGACTTGAATGAGTTGCCTGAGAACCAGAGAGAGAATGATAATTCAGCTGATGGGAAACTTGAGCATGGTGCACTGCAAACAGTGAAAAATGAAGAGAATTATATAGATACAGTGTTCAGGAAGACCGTAAATGCGATTAGAAAGTTGGAATGTGATGGGTATATAGAGAAAAACTTCAGGATGGAGTTTCTCACATGGCTCAGTATCCGGGCAACAATAAAGAATGCAATGCTAGTTGGTGTGTTTATTGACACATTTTCTGATGATCCTCATAGTCTTGCGGAGCAGTTAGTCCATACCTTTGGGGAGGAAGTTAGCAGCAAAAAACCTCGCAAGCAACTGTGA
Protein Sequence
- >A4U43_C01F580
MMTTEQASSSMGLRFPEYILSPSKFPEMTQEEKEEFIEQLCHSSEKAQERLRSLKRNEIIELINIENGRERKFTSIPKRLLINHLCGIISDKISENENHAVASTDLVAPSSTLPLPPLNAPTSVRSKRKSCNPSPLPSVKYCDNSACRAEMKLMDNFCKRCSCYMCSNYDENKNPSFWLVCESKTSSQDNTCGLSCHLECALKDEREGKDLKRRGTKLDGSYQCGNCGNVNDLISCCRKLLMEAKDVRRVNDLCSRIYLSHKILSSTEKYLNLHEAVGSIKRKLEDEVGVLNNLPFNMSHSLVRRLPVYDEVLTLCSHAINLLDSLPLTPPRFNHIELQHCEAGATSEAIKPQNREAEAANVGTETQNCEAEPTNEAIEPQNCEAQATNESNPEVGISAQVSVLKDQNCEAQATNESNPELGISAQVSVLKEDKSERKKTVMIDLNELPENQRENDNSADGKLEHGALQTVKNEENYIDTVFRKTVNAIRKLECDGYIEKNFRMEFLTWLSIRATIKNAMLVGVFIDTFSDDPHSLAEQLVHTFGEEVSSKKPRKQL