Information report for A4U43_C01F26850
Gene Details
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Functional Annotation
- RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.
Homologous
- Beta vulgaris: BVRB_5g117920
- Capsicum annuum: T459_32871
- Glycine max: Glyma.17G085700, Glyma.05G040600
- Gossypium hirsutum: Gohir.A03G061700, Gohir.D03G104300
- Juglans regia: Jr02_02800, Jr09_03840
- Manihot esculenta: MANES_14G061800
- Musa acuminata: Ma02_g08420
- Nicotiana attenuata: A4A49_27879
- Populus trichocarpa: POPTR_015G082500v3
- Solanum tuberosum: PGSC0003DMG400026989
- Vitis vinifera: VIT_17s0000g09070
Gene Resources
- Pfam: PF00850
- UniProt: A0A5P1FUY6
- EMBL: CM007381
- AlphaFoldDB: A0A5P1FUY6
- OMA: NIPLMMV
- InterPro: IPR000286 , IPR003084 , IPR023696 , IPR023801 , IPR037138 , IPR050284
- PANTHER: PTHR10625 , PTHR10625:SF10
- SUPFAM: SSF52768
- Gene3D: 3.40.800.20
- CDD: cd09991
Sequences
gDNA Sequence
- >A4U43_C01F26850
CATGATATTCGGTCCTCAGGTTCAGAATCATAATACTCACCATTCCAAAGTTTTGGTTTCTGATCCATATCTTCATCTTCCTATATCAATCAAATCATATGATTTAGATGAAAAACACACAAAAGAGCCAGATAATCTGACAGTGAAGTAATACCTCCTCAGGAGGTTCTGTATTTGGTGGTCTCTCCTGGAACTGCACACTTGGAACATGTTGTATTTTTGAAAGGTGCTCAAGTAGCACAGTCCTGCATAAAGCAAGTCGTGTTGTTTGAGAGACAAAAGAACACAATTGAAGGAACAAAACTTTTTCTCTCTGAATATCTTTTCTAACAAACTTCAGAAGAGCAATGATGTAATTAAACTCAACACACCAAGAAGCTGATGAGGCAGATACAGAAAGAATGTTCAACGCAATTTGTTACCTCCAAATACCTTTTTCCAAACCCCTAAACCAGTATTATACTCACTTTGCATCTTCTACTGGAATTTTCCATTCGTAAAAGCAAAATGGCATTAGCTACTTGTTTCCATAATAAGGTATCTCTGACTGAGGACCAAGAAAAAGTCACTAGATTTACAGCATGAATTCTGGTTTCCTAGAAAGTAAATAAACTCTATAACATGATTGTTCCATGTAGAATGTCAATGTCTTTATAAACATGAGCAGCAAAGCAGTTCAGTCCAGTATGCTGTAAAAGAAAACCAGGGTAGCAGTTCATTAGATAAAAAAGCAACTGCTCAAGCAGGTGGAACACTGCTCTAACGAATTAATACAGTAATAATGTAATTGTAAGCTGCTGATTACCTAAATCTAGATCATTCTTTAACGAAGTTGATTTTTTCATAGAGAATGCCTAATACACATTTTAACTTTGCTATCATATGTATTCATTTCAGTTTCTAAAGTCAAATGATCGAAGGAGGCCACATTTTGAATGGAAGAATATCAAAGACAGACTATCTAACAGAAAAATATATTGAAAACAAAGTATATGTAACATTGTAGAATGTGTTTGCATATGATACAAGAAACAGAGCGATTAAAGTGGAAAAAAAGAAAGAAAGAAAGAACTAATGAGCACATGAAAAAGAGAAAGGTCAACAAATACCTCATTTTCTCCAGATCTTTTGCAGTGTTCTTATTTTCTGCAGGTGATGGTGCAACATGCAAAGTGTAGTCAGGACCAAAGTACTCATAATATTCATTATAAGGTAATTTGTTTTCCGGTTCCACTCCAACTGCAACTGCTGTCTATATACAACGTAAAATACAATAATTATATTCAGGACAGAACTACAAAAGAGGTTTAGAAATCCATCTGATATCTCACAAACCTCATAACACCAGCAGCGTGCAACATTACGAATTGTATAGCCTCCGCCACCCAAGACCATAAGTGGCACATTGAAAGATCTAAGGAACCGTAGACAATCTGCATGCCCTTTAACTGAAAGATTAAAACAACCTAACCTATCTCCAGCAAGGGAATCTGCGCCACATTGCAGGACAACTGCATCAGGCTGATACACCTCCATGACTTTTTGAATGACCGGTCGGAAAAGACCTTGAAAACTATTGTCATCCATCCCATCATTTAAAGGAACATTTAAAGCATAGTACTTTCCTGACCCATGGCCAACATCCTTGACATGCCCAGTCCCAGGAAAGAAGTCCCCGAATTTGTGGAACGAGACAGTCATGACTCTGTCAGTAGTGTAAAAAGCCTCCTCAACGCCATCTCCATGGTGGACATCTATGTCTACATATAGCACACGCTGACCATCAACAGAATCAGCTAAAAGTCCAAATATAGAAGACATCACAAAAATAGTGATCTGAACACTACTGAAACACATACAGAATAAATTACCCAGTAGAGAACATCAAATTAAGTGCATGGAGCTTTCCTCAGTTTGATTCCACAATGCAAGACCGGTAGAACTCAAGATACTAGACATGAATTTGTATAAATATGAGATGATGATGACAGTAAAGAAGACAAGAGGAAAGAAACAGACGAAGCCAAGCATGGAATAAGGAATACAATAAATTTTTTGAAGCATTGACAGCTCTTATATTGCCAATGTTACATTAAACGTTGGGCGCTTCTAGGCGTCGGACTTGGCGCCCAGCGCTTAGTCGCCTAGGCGGGCGCCTAGGCGGGCGCCTAAGCGGTTTCTGAGCGTTTTTTTTCTTTCTTCATTTAAGTGGTGGTCGATGAGGTTTTGCTGAAGGTCGGAGGAGGTAGTGGATATGTTCATATTTGGAGGTTAATGGAGTTTAGAGGACGTCTAGGCTACAACACATAAAATCACAATCAATGCCTACAGGGTGCAATCCACGTAAGCAGACAATGCTCCCCTAAACGCTCGTAAAATCTAGGTGGGCAGCCTAAATACCGCCTAGGCGCTAGGCGCTAGTTAGACGGCCTAGATACCGCCTAGGCCTAGGCGTACGCCTAAGCGGACTAGGCGGAGGTTTTTTAAAACAGTGTATATTGCAGAATCAGGAACCCACTTTTAAAAGATATGAGAATGATGCATGAACTGAAATCATCTTCACACCTCTAGAGGTAGGTGTACTGGTCAGGCTGCCAGCTGGAGGGATTTGTAAGTTCAAGTCCCTCTACCGCCAATTCTGGTGGCAACAGAATCTTTTCTGTTAATTAACCAGCCATTGCAGAGGAGGTTTTGATGCACCCAAAACACTGATTTTGTAGGTCCTAAGAGTGTTTCTTTTCCTATCGGGTGAATGGGAGGTGTAAGCACCACCTTCATGCTAGAAATTTTCCAACAAAAAAGTAGCACACTGCTGGGAAAGCAGTATTTGAAACATTCCATAACCCGGTAAAAATTTTACAAGAATTCTAACTGGCTGTCAATAATTGACATGAAAAATTTCCAGCTAAGGCAACCTTTCAGAAGAGGATTTGCCTCTAAAAATCAAAAGCAACCAGCTTGTAGAGGACCAACTTTGTTACTCAAGCTCATGCAACAACTAGCAGTCTACCAATATTATATACCAGCTTCATAATATGCAAGTCAAAATTAATGCCGTCCTAGGGATACTCCCCTAAATTTATAATTTTACATTTTAATTTTATGTGCACATATGTGTATTTATATTTATCATCTGCAGATGCCTGAATTCATAATCCTATTCATTTCTAAAAATTAAAATTAACCTAAATTGGCACAAGAAACATATTATGTTCCCATTGTAAATTCCTCCTGGTTATACTAATATACTATCAAAAATTTCAATTTACCTTCCATATCTTTATATTTGACAATTTCCCTCCGCATTTATAATTAAAATTTTAAGTTACACCTCAACTTTTTGTAAGGATTTTTTCTTAGTATATTGTCATATATACTATTTATTTGTAAATATGACAAAACCACCCTTAACTATACATATTTAAACCATTTAACCTATCTTCCTACTAGTAACACTTGCGCGCTACAGCGCTAGAATATCTTTTCTTAATAAATTGAAATTTCATTAAATAAAATAATGTAACCGTGAACACACAGAAGACAAGCAACACAACTCAATTCATTTGGAAACAAAAAGCAAGTTCCCTCCCTCTCCCCCACTCTGCCATTCAAAATCTCTCTTTCATAAGGTATTCCTTTTTCTTTTAATCCTAATAAACACATAAGTACAAGAAGCCGGCTACTGATTTCCCCCTCTTAGAAGTTAGAAGTAATCAGGTCTTATCTTCAATTGGAGATGGATCTCAAATCGACGAAGAGAAAGGAGCTTCAACCCTTCGCAAGAAGCATAGGTTTCCTACAAATGCCACAAATTCTCAGTTGATCAAGAGTCCCTCGTTGATATTACAGGAGGTTGATTTTACATGACAGACAAACAGGAGGATGATTTTGTTTGCCCCCACTTTTCCTTTTTTGGATATTTAGGGTTTTCAGTATTTGAACCTTACTGTTATTGTGTTCAAAGGGCAAGACAGCGGACGGCACAAACTGGGCGACGTGCCTCTCTCCCCCTCCCTTTTGAGATTTTTTTAAATTCAGGTCAATGTCAGGAATGAACAATGGGGCATAGTCTGCATAGATTGGGTCTGATTTAACCTATATACCTTTCAGATCTATCATATTGTATTCCGACACCAAACATTTCTGAATATTACACTGTCTTGGGATAGATATCGTAATATCAATTAAGAACGCCTAATTCTATAATTTTCACTAAGACAATGATATGCTCGGTGTTCAGTTCTTTTTCACATTACATTTTTTCCCCTGCTCCTCATTAAAAATATGAACTTTGACATTACACTGAAACCACTAAAAAGCCTAGATGAGCTTCAGAACTTTGGTTTGGGTTGGAGATACCTCTTTGGGATGTAAGAGCTTGGGCTTTAACTTGTCTTTGCTAAACCATAAGATGAGAATATTAGCTATACTAGGATGCCTTTATAATCCTCTGGCAACCTTGATTATTCTGACAAATAACTACCAGCTTTCGAGATTGTTGAAACAAACAGTCTCACATTCACATTATGAATTATTTCAAACATCAGGTATGCTTGTGTAAAAGCCCTTTTTAAGTCATTTACTTGATTTATGTGCTTTCTTTGTACTCTTAATGCCCGTCGTCTTCAGCAACTCAAACTGGCAATTTGAAATCGAAGAGCTCAAGACTCTACCCAACACTCCCAAATTACTGAGAAATATCTAACTCGCAGCAATCTTACCAACATTTCATCAACATACACAAAACTTACTCCTATTCTTTAACATTTCAAAAACATAGAATATAAACTAATTATACAAATTTAATTTCAAAAAAGTTAGTGTTTCTTAAAAAATGAATAAACCTTTTACTTTTGCAATTTCATGATAAATTTGGCAAACAGAGTTTCTTCAGCAGACAACCAATACAATAAAATCCATATCACATTGCATAAATTATACAGAACTAAACAGTTTGCACTTACAGTCGGTTTGGATACAAATGAGGGAAGGGAAGGGGAGTGATTGCCTTAAACCCAAGGGGAGGGAGCGGAAAGGAAAAGGGTGGAATGTATTCATTTATGTTTGAATAGACAACGAGAGGATGAGAGAGTACACTATAATATAATATATGTGTTTGTTTAGAGTGGGGGGTTGAAAGGGAAGGGAAGCTGCTTGACCAGTATGCCCTTTTAATAAAATAAGAAAGAACGCCTTTTGATTTTCTCATATAAAGCATTAAGCAATATTGAAATTTCAAGAAAATACCACTTAAAACCCCTCTCTTCCCCTCCCAATCCGTCTACTTCTAGAGGGTTGAGAAAGTGGCTGAATTTTCTAATTTTCATCCCTCTCCTCCCCTCCCATTGCCAACTAAAAAGTGTAAAGAAACACGATGTTAGAAGGGTCAGCAACTCAGCATTGTAGACCTCCCCCTCCCTCCCCCTCCCATCCTAAAAAAAACCTCTATCCAAACTCAGTGTTAGGGTTTTTGTTTAATTTACCTTGTGAAACTTGAGAAGCTCGAGAATCCCCAGCACGATATCATTAACATAGCAAAACCCCGACGCCTCGCACTTCTTGGCGTGATGCAATCCCCCGGCCCAATTGATGGCAATGTCCGCATCCTCCCTGTTCAGCTTCACCGCTGCCCCTATCGAGCCCCCGGCGCTCGCCTGGCAGAACTCGAACAGACCCTCGAAGACCGGGCAGTCGTCGCCGACGTTGAACCTCTTCAGCATCTTAGAATCGCGGTTGTCGGCTGTTGGCGTCGTCGGAGGAGGCGTCGGACGGGGAGGGAGGAGGGGGAGACGGAGGAGAGGAAGTCGACGTAGTCGTCGGAGTGGAACCGGCGGATGTCGGCGGCGGGAGGCGGGAAAGACGGGAGATCTGGAGGAGTTGGTGGAGGAGTAGTGGACGACGAGGGAGTGGGCCAT
CDS Sequence
- >A4U43_C01F26850
ATGGCCCACTCCCTCGTCGTCCACTACTCCTCCACCAACTCCTCCAGATCTCCCGTCTTTCCCGCCTCCCGCCGCCGACATCCGCCGGTTCCACTCCGACGACTACGTCGACTTCCTCTCCTCCGTCTCCCCCTCCTCCCTCCCCGTCCGACGCCTCCTCCGACGACGCCAACAGCCGACAACCGCGATTCTAAGATGCTGAAGAGGTTCAACGTCGGCGACGACTGCCCGGTCTTCGAGGGTCTGTTCGAGTTCTGCCAGGCGAGCGCCGGGGGCTCGATAGGGGCAGCGGTGAAGCTGAACAGGGAGGATGCGGACATTGCCATCAATTGGGCCGGGGGATTGCATCACGCCAAGAAGTGCGAGGCGTCGGGGTTTTGCTATGTTAATGATATCGTGCTGGGGATTCTCGAGCTTCTCAAGTTTCACAAGCGTGTGCTATATGTAGACATAGATGTCCACCATGGAGATGGCGTTGAGGAGGCTTTTTACACTACTGACAGAGTCATGACTGTCTCGTTCCACAAATTCGGGGACTTCTTTCCTGGGACTGGGCATGTCAAGGATGTTGGCCATGGGTCAGGAAAGTACTATGCTTTAAATGTTCCTTTAAATGATGGGATGGATGACAATAGTTTTCAAGGTCTTTTCCGACCGGTCATTCAAAAAGTCATGGAGGTGTATCAGCCTGATGCAGTTGTCCTGCAATGTGGCGCAGATTCCCTTGCTGGAGATAGGTTAGGTTGTTTTAATCTTTCAGTTAAAGGGCATGCAGATTGTCTACGGTTCCTTAGATCTTTCAATGTGCCACTTATGGTCTTGGGTGGCGGAGGCTATACAATTCGTAATGTTGCACGCTGCTGGTGTTATGAGACAGCAGTTGCAGTTGGAGTGGAACCGGAAAACAAATTACCTTATAATGAATATTATGAGTACTTTGGTCCTGACTACACTTTGCATGTTGCACCATCACCTGCAGAAAATAAGAACACTGCAAAAGATCTGGAGAAAATGAGGACTGTGCTACTTGAGCACCTTTCAAAAATACAACATGTTCCAAGTGTGCAGTTCCAGGAGAGACCACCAAATACAGAACCTCCTGAGGAGGAAGATGAAGATATGGATCAGAAACCAAAACTTTGGAATGGTGAGTATTATGATTCTGAACCTGAGGACCGAATATCATGA
Protein Sequence
- >A4U43_C01F26850
MAHSLVVHYSSTNSSRSPVFPASRRRHPPVPLRRLRRLPLLRLPLLPPRPTPPPTTPTADNRDSKMLKRFNVGDDCPVFEGLFEFCQASAGGSIGAAVKLNREDADIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKFHKRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDVGHGSGKYYALNVPLNDGMDDNSFQGLFRPVIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTLHVAPSPAENKNTAKDLEKMRTVLLEHLSKIQHVPSVQFQERPPNTEPPEEEDEDMDQKPKLWNGEYYDSEPEDRIS