Gene Details:

  • Gene ID: A4U43_C01F1950
  • Suggest Gene Name: ATU2AF35B
  • Description: putative flowering gene
  • Species: Asparagus officinalis
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.

Homologous

Sequences:

gDNA Sequence
  • >A4U43_C01F1950
    CATTCGCCCTTCTCTTCTCTTTCTCTGTTCCATTGCTCAATCCTTGCCCTCCGCTCCTCACTTCCCTCCCTGACTGGGCTCCTTGCTCTCCTAGGGCTGGCTTCCCGCCGCCTATCCCTATCATTGTGATACCTCCCATGNNNNNNNNNNCTCCCATGCCTGCCTCCACTTCTTCCACCACCACCTCTACGATAATCTCCGTTGTCTCGGTAATCCCTACGTCGTGGGCTCCGACTCCTGCTCCGGCTTCGCCGCCCATGAGACTTCCGATAGCGACCAAAGAGCTTCTTCCTTAGCTCTCTACCAATCTGCTTCACATGCATGAAATTGCAATAACCTCCACGGTTACAACTGTCCTCTTCAAACTGCCGGCAAGTTGCCTCTCGGAAGTCAGTGACTGGTGAGAAATCAGCAATTATTGGGCGACCAGAATAGAACCTCCCTTGCAAAGCTCGAAGAGCAGCGGCTGCCTGATCCTCCTCCTTGAACTGAGCGTAAACATTTCCAACCATGTGATCAGCAAGATTGTCACATATGTTGAGGGTCTCAAGCTCACCAAACTTACTGAGTTCTTCAAAGATATCTTCATAGAAATCCTCAAAGTGTTCTTGGATCTTGGCAGGGTCAATAGCCTGGCCCTGGGAGTCCACACCAGGGGTGATACTATCAGGGCGTTGGTACATGTTGGAAAGTACGAGGGTAGGAGAGATCGTGGGGCGGTTATGAAGCCGTGAACACCGGTCACCAT
CDS Sequence
  • >A4U43_C01F1950
    ATGGTGACCGGTGTTCACGGCTTCATAACCGCCCCACGATCTCTCCTACCCTCGTACTTTCCAACATGTACCAACGCCCTGATAGTATCACCCCTGGTGTGGACTCCCAGGGCCAGGCTATTGACCCTGCCAAGATCCAAGAACACTTTGAGGATTTCTATGAAGATATCTTTGAAGAACTCATTCAAGGAGGAGGATCAGGCAGCCGCTGCTCTTCGAGCTTTGCAAGGGAGGTTCTATTCTGGTCGCCCAATAATTGCTGATTTCTCACCAGTCACTGACTTCCGAGAGGCAACTTGCCGGCAGTTTGAAGAGGACAGTTGTAACCGTGGAGGTTATTGCAATTTCATGCATGTGAAGCAGATTGGTAGAGAGCTAAGGAAGAAGCTCTTTGGTCGCTATCGGAAGTCTCATGGGCGGCGAAGCCGGAGCAGGAGTCGGAGCCCACGACGTAGGGATTACCGAGACAACGGAGATTATCGTAGAGGTGGTGGTGGAAGAAGTGGAGGCAGGCATGGGAGNNNNNNNNNNCATGGGAGGTATCACAATGATAGGGATAGGCGGCGGGAAGCCAGCCCTAGGAGAGCAAGGAGCCCAGTCAGGGAGGGAAGTGAGGAGCGGAGGGCAAGGATTGAGCAATGGAACAGAGAAAGAGAAGAGAAGGGCGAATGA
Protein Sequence
  • >A4U43_C01F1950
    MVTGVHGFITAPRSLLPSYFPTCTNALIVSPLVWTPRARLLTLPRSKNTLRISMKISLKNSFKEEDQAAAALRALQGRFYSGRPIIADFSPVTDFREATCRQFEEDSCNRGGYCNFMHVKQIGRELRKKLFGRYRKSHGRRSRSRSRSPRRRDYRDNGDYRRGGGGRSGGRHGXXXXHGRYHNDRDRRREASPRRARSPVREGSEERRARIEQWNREREEKGE