Information report for A4A49_35242
Gene Details
|
|
Functional Annotation
- encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.
Homologous
- Actinidia chinensis: CEY00_Acc06634, CEY00_Acc21486
- Capsicum annuum: T459_33275, T459_33913
- Prunus avium: Pav_sc0001938.1_g060.1.mk
- Prunus persica: PRUPE_6G306600
- Sesamum indicum: SIN_1022787
- Solanum lycopersicum: Solyc10g006770.3, Solyc01g101030.3
- Solanum tuberosum: PGSC0003DMG400025001, PGSC0003DMG400018250
- Vitis vinifera: VIT_14s0060g00580
Gene Resources
- Pfam: PF14826 PF00557 PF08512 PF08644
- UniProt: A0A1J6IRN6
- EMBL: MJEQ01037189
- AlphaFoldDB: A0A1J6IRN6
- KEGG: nau:109228905
- OMA: DWCLSAR
- InterPro: IPR000994 , IPR011993 , IPR013719 , IPR013953 , IPR029148 , IPR029149 , IPR033825 , IPR036005 , IPR040258 , IPR048969
- PANTHER: PTHR13980 , PTHR13980:SF24
- SUPFAM: SSF55920
- Gene3D: 2.30.29.150 , 2.30.29.210 , 2.30.29.30 , 3.40.350.10 , 3.90.230.10
- OrthoDB: A0A1J6IRN6
- SMR: A0A1J6IRN6
- CDD: cd01091
- STRING: 49451.A0A1J6IRN6
Sequences
CDS Sequence
- >A4A49_35242
ATGGTTGAAGAGAGAAATGGAAATGGACCACCTTCAAATGGGAGTGTGGCAGGTGGAAATGCTTATACAATTGACTTGAATACTTTCAGTAGCCGACTGAAGGCCCTATATTCACAATGGCGCGAATATAAAGATGACTTTTGGGGTTCTTCTGATGTACTTGCTATAGCTACACCACCACCTTCGGAGGACTTGAGATACTTGAAATCCTCAGCTGTCAATATTTGGTTGCTAGGGTATGAGTTCCCTGAGACAATAATGGTTTTTGGAGATAAAGAGATACATTTTTTGTGTAGCCAGAAGAAGGCATCTTTGCTCAATGTTGTGAAATCCGCTGCTAAAGAGGCTGTGAATGTGGAGGTTGTCATGCATGTGAAGGGAAAAAGTGAAGATGGGACTGCTCAAATGGAAAATGTGCTCCGGGCTATCTGTATGCAGTCAAAGTCAGATGGTCGTGATTCAGTTATTGGATATATTGCAAGAGAGGCGCCTGAAGGAAAACTCTTGGAGATATGGACCGATAAGATGAGAAATTCAGGCCTTCCTCTTAGTGATATCACAAATGGCCTGGCTAACCTCTTTGCCGTGAAGGACCAGAGTGAGATAATAAACGTGAAGAAAGCTGCATATTTGACTGCTTCTGCAATGAAGAACTATGTTGTTCCAAAGCTTGAAAAAATTATTGATGAGGAGGATAAAGTAACTCATTCCTTATTGATGGATGACACAGAAAAGGCTATTCTGGAACCTACTAAAATCAAGGTGAAGCTGAAAGCTGAGAATGTCGACATATGTTACCCTCCAATCTTCCAGAGTGGTGGGAATTTCGATCTTAGACCTAGTGCTACAAGCAACGATGACCATTTGTACTATGATTCTGCCAGTGTGATCATATGTGCAGTTGGATCACGGTACAACAGCTACTGTTCAAATGTTGCCAGATCTTTTCTTATTGATTCAACTTCGAAGCAGACCAAGGCTTATGAGGTTCTTCTTAAAGCTCATGAGGCAGCAATTGGTGCATTGAAGGCGGGAAACAAGCTTAGTGCTGTGTATCAAGCAGCTCTTGCAGTAGTTGAGAGGGATGCTCCTGAATTGATTAACAACCTAACAAAATCTGCTGGGACTGGGATTGGTCTCGAGTTCCGGGAGTTGGGGCTGATCCTTAATGCGAAGAATGATAAGGTGCTGAGAGAGGGAATGGTTTTCAATGTGTCACTAGGTTTCCAGAATTTGCAAACTGAGACCAGCAAAGAAAAGAGTAGGAATTTTTCACTTTTGTTAGCAGATACAGTTATTGTCACAAACGATGGCCGTGAGGTGGTTACTCAGCTGAGCTCCAAAGCCTTGAAGGATGTAGCCTATTCATTCAATGAAGAGGAGGAAGAGGAGGAGGAGGTTAAAGTGAAAACTGAGTCAGATAGGAAGGAGTCATTGTATTCAAAGGCAACACTTAGATCAAACAACCAAGAAGAGCTCCGGAGGCAGCACCAGGCAGAACTTGCCCGTCAGAAGAATGAAGAAACTGCGCGTCGTCTTGCTGGTGGAGGGGCTTTATCTGGGAACAATAGGAGTGCTGCTAGGGCCTCAACTGACCTTGTTGCCTATAAGAGCATTAATGACCTACCACCTCCTAGGGAGATGATTATTCAGGTTGACCAGAAGAATGAAGCCATTCTTCTACCGATATATGGTACTATGGTTCCTTTCCATGTGGCTACTGTTAAGACTGTGTCGAGCCAGCAGGATACCAACCGCAACTGCTACATCCGTATCATTTTCAATGTTCCTGGTGCCCCTTTTACACCTGTTGATGCAAATGCTTTGAAGAATCAGGGTGCCATTTACCTGAAGGAAGTTTCTTTTCGTTCTAAGGATCCAAGGCACATAAGTGAAGTAGTTCAGCTGATTAAAACTCTAAGACGGAATGTTATGGCCAGGGAGTCTGAGAGAGCCGAAAGGGCAACTTTGGTGACTCAGGAAAAACTTGTACTTGCAGGGAATAAATTCAAGCCAGTTAGGCTGTCTGACTTATGGATTCGCCCCTCTTTTGGTGGTCGTGCAAGAAAGCTTCCGGGTACATTGGAAGCTCATGTCAATGGTTTCCGGTACTCAACCTCAAGACCAGATGAGCGTGTTGACATCATGTTTGGCAACATCAAGCATGCGTTTTTTCAGCCAGCAGAGAAGGAAATGATTACCCTTCTTCACGTTCATCTGCATAACCACATAATGGTAGGAAACAAGAAAACCAAGGATGTACAGTTCTATGTTGAGGTAATGGATGTGGTCCAAACACTTGGAGGTGGAAAGCGGTCTGCCTATGACCCAGATGAGATTGAGGAAGAACAGAGAGAAAGAGATCGAAAGAACAAAATCAACATGGACTTCCAAAATTTTGTGAACCGGGTGAATGATATGTGGAGCCAGCCTCAGTTTAAAGGACTCGACCTGGAGTTTGATCAACCTCTGAGAGAACTTGGGTTCCATGGAGTCCCTTATAAATCATCAGCATTCATTGTGCCAACCTCAAGCTGTTTGGTTGAGCTGATAGAGACCCCATTTCTTGTGATAACCCTTAGTGAAATTGAGATTGTGAACTTGGAGAGAGTTGGGTTTGGGCAGAAGAATTTTGATATGGCAATTATCTTCAAGGACTTCAAGCGTGATGTCATGCGCATAGATTCCATCCCGACCTCTGCACTTGATGGCATCAAGGAGTGGCTTGACACAACTGACATCAAATATTATGAGAGCAAGATGAATCTGAATTGGCGTGAAGTATTGAAGACCATAACTAGTGACCCTCAAAAGTTTATAGATGAAGGTGGCTGGGAATTTTTAAATATAGATGCTTCTGACTCAGAGTCTGGGTATTCAGAGGAATCAGATCAAGGTTATGAACCTTCAGATGCGGAACCTGAGTCAGATTCAGATGACGATGACTCTGATAGTGAATCTCTGGTAGATTCCGAGGAAGAAGAGGAAGAAGATGATGAGGACGACTCAGAGGATGAAAAAGGCAAAACATGGGAGGAGTTGGAGAAGGAGGCAAGCAACGCAGATAGGGAGAAGGGGAATGAATCCGATAGTGAGGACGAGAGGAGGAGAAAGAAGAACTTCGGGAAGTCACGAGCTGGTCCAACTTCTGCAGCTCCTAAGCGAACGAAGTTCAGGTAG
Protein Sequence
- >A4A49_35242
MVEERNGNGPPSNGSVAGGNAYTIDLNTFSSRLKALYSQWREYKDDFWGSSDVLAIATPPPSEDLRYLKSSAVNIWLLGYEFPETIMVFGDKEIHFLCSQKKASLLNVVKSAAKEAVNVEVVMHVKGKSEDGTAQMENVLRAICMQSKSDGRDSVIGYIAREAPEGKLLEIWTDKMRNSGLPLSDITNGLANLFAVKDQSEIINVKKAAYLTASAMKNYVVPKLEKIIDEEDKVTHSLLMDDTEKAILEPTKIKVKLKAENVDICYPPIFQSGGNFDLRPSATSNDDHLYYDSASVIICAVGSRYNSYCSNVARSFLIDSTSKQTKAYEVLLKAHEAAIGALKAGNKLSAVYQAALAVVERDAPELINNLTKSAGTGIGLEFRELGLILNAKNDKVLREGMVFNVSLGFQNLQTETSKEKSRNFSLLLADTVIVTNDGREVVTQLSSKALKDVAYSFNEEEEEEEEVKVKTESDRKESLYSKATLRSNNQEELRRQHQAELARQKNEETARRLAGGGALSGNNRSAARASTDLVAYKSINDLPPPREMIIQVDQKNEAILLPIYGTMVPFHVATVKTVSSQQDTNRNCYIRIIFNVPGAPFTPVDANALKNQGAIYLKEVSFRSKDPRHISEVVQLIKTLRRNVMARESERAERATLVTQEKLVLAGNKFKPVRLSDLWIRPSFGGRARKLPGTLEAHVNGFRYSTSRPDERVDIMFGNIKHAFFQPAEKEMITLLHVHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDMWSQPQFKGLDLEFDQPLRELGFHGVPYKSSAFIVPTSSCLVELIETPFLVITLSEIEIVNLERVGFGQKNFDMAIIFKDFKRDVMRIDSIPTSALDGIKEWLDTTDIKYYESKMNLNWREVLKTITSDPQKFIDEGGWEFLNIDASDSESGYSEESDQGYEPSDAEPESDSDDDDSDSESLVDSEEEEEEDDEDDSEDEKGKTWEELEKEASNADREKGNESDSEDERRRKKNFGKSRAGPTSAAPKRTKFR