Information report for A4A49_34164
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Actinidia chinensis: CEY00_Acc17948
- Capsicum annuum: T459_10648
- Citrullus lanatus: Cla97C06G128240
- Glycine max: Glyma.04G203000
- Juglans regia: Jr02_00090, Jr09_00040
- Lactuca sativa: gene-LSAT_4X85420
- Manihot esculenta: MANES_14G043200
- Musa acuminata: Ma06_g09860
- Populus trichocarpa: POPTR_015G109300v3
- Sesamum indicum: SIN_1010823
- Solanum lycopersicum: Solyc03g118020.3, Solyc03g118010.3
- Solanum tuberosum: PGSC0003DMG400014229
- Vitis vinifera: VIT_00s0283g00020, VIT_14s0068g00720
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: A0A1J6J0Y6
- EMBL: MJEQ01037185
- AlphaFoldDB: A0A1J6J0Y6
- KEGG: nau:109223489
- OMA: ARCADHH
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437 , IPR047395
- PANTHER: PTHR12302 , PTHR12302:SF2
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- OrthoDB: A0A1J6J0Y6
- SMR: A0A1J6J0Y6
- CDD: cd20443
- STRING: 49451.A0A1J6J0Y6
Sequences
CDS Sequence
- >A4A49_34164
ATGGCATCAACAGGATGGTTGAAGGGAAGAGTGAAAGCCGTTCCCTCGGGTGACAGTTTGGTGATAATGGGTAGTTCCAAGGCTGAAATTCCCCCTGAAAAATCTATTACCTTAGCATCTCTAATGGCTCCACGATTGGCACGTCGTGGTGGGGTGGATGAGCCATTTGCATGGCAAAGCAGAGAGTTCTTGAGGAAGCTTTGCATTGGAAAGGAGGTCACTTTCAAGGTGGAATATACTGTACCTTCCATAGGGAGGGAATATGGCACTGTTTTTCTTGGCGACAAGAATGTTTCCATGCTGGTTGTTGCTTCAGGCTGGGCCAAGGTCAGAGAGCAGGGCCAACAGAAAGATGCTAACCCCTATTTGAAATCTCTGCAAGATGCCGAAGAACAAGCTAAGCAACAAGGTCTAGGTCGTTGGAGTAGGGCACCTGGTGCTTCTGAGGCATCTATTAGGAATCTACCTCCATCTGCAATCGGTGATCCTAGTATCTTTGATGCAAGGGGCCTTTTGGAGGAAAGTAAAGGTAAGCTGATAGAAGCATTTGTTGAGCAGGTTCGTGATGGAAGTACACTCCGAGTGTACTTGCTTCCAGACTTCCAGTTCATCCAAGTGTTCGTTGCCGGAATACAGGCACCAACTATGGGAAGAAGAGCAACATCAGAAACTGTTGTTAATGCTAGTATTACCTCTGATGAACCAAACAGAGAATCAACTACTGAACCTCGTGCTACTCCGACAACAGCTCAGAGGCTGGCAGCCTCAGCAGCATCTGTATCAGAAGTTGCTCCTGATCCGTATGGCAGAGAAGCAAAGCATTTTACCGAAACTCGTGTGTTAAATAGAGATGTTCGGATTGTCCTGGAGGGTGTTGACAAGTTTAGCAATCTGATTGGCTCAGTGTACTATCCTGATGGAGAATCGGCAAAAAACCTGGGTTTGGAGCTTGTTGAAAATGGTTATGCTAAGTACGTTGATTGGAGTGCAAACATGCTTGAGGTGGAAGTCAAGAAGCAGTTGAAAGATGCTGAGCTTCAGGCCAAGAAGACTCGCCTAAGAATCTGGACGAACTATGTACCCCCAGCAACAAATTCCAAGGCTATTCATGACCAGAATTTCACAGGAAAGGTGGTTGAGGTTGTCAGCGGAGATTGTCTCATTATAGCTGATGATTCTCTGCCATTTGGACATCCATCAGCAGAACGAAGAGTCAATCTTTCAAGTATTAGGACTCCTAAAATGGGGAATCCTCGTAGAGATGAAAAACCTGCTCCCTATGCTCGTGAAGCAAAGGAATTTTTGAGAAATCGCCTTATCGGAAGACAGGTGCATGTTTCAATGGAGTACTCTCGGAAGGTCGGCATGGCAGATGGGCCTGGTGCTCCCGCCAGTGGCACAGATTCAAGGGTGATGGACTTTGGATCTGTATTCCTAGCATCAAAGGATGGGGATGATGCATCACCTGCTCCATCTGCTGCAGGCAACCAGTTGGCCGGAGTGAATGTTGCTGAACTTTTAGTTAGCCGTGGTTTTGCAACTGTTGTTAGACATCGTGATTTTGAAGAACGTTCAAACTATTATGATGCCCTTCTCTCAGCTGAATCACGCGCTATTTCTGGGAAAAAGGGGATGCATTCTCCTAAAGAACCTCCAGTGATGCATGTTACAGACCTGCTAGCAGGATCGGCAAAGAAAGCTAGAGACTTTTTGCCTTTCTTGCAGCGTAACAGGAGGATGTCTGCTGTTGTAGAATATGTCCTCAGTGGTCATAGATTCAAGCTTTTTATTCCCAAGGAGACTTGCAGCATTGCTTTCTCTATCTCTGGAGTGAGATGCCCAGGTCGTGATGAACCCTACTCTGAGGAAGCCATTGCCTTGATGAGGAGGAAGATAATGCAGAGGGATGTTGAGATCGAGGTAGAAACAGTTGATAGAACAGGTACCTTCTTGGGCACATTATGGGAATCGAGATCCAATGTGGCAGTGACTCTACTGGAAGCTGGTTTAGCAAGGCTTCAAATTTCTTTTGGTACTGATAGAATCCAAGATGCTCATCTCCTCATGCAAGCTGAACAGGCAGCCAAAAGGCAGAAATTGAAGGTGTGGGAGAATTATGTTGAGGGAGAGGAAGTTGCCAATGGTGGAGCAGCTGAAAAGCGCCAAAAAGAAGAGGTGAAGGTCACAGTCACCGAAGTTTTGGGAGGGGGTAAATTTTATGTGCAGTTGGTTTCCGACCAGAAAGTAGCTGCCATTCAGAAGCAGCTTGCTTCTCTAAATCTTCAAGAGGCTCCTGTAATTGGTGCCTTTAATCCAAAGAAAGGTGATATTGTTCTTGCTCAATTCAGTGCTGATAATTCATGGAACCGAGCAATGATTGTCAATGCCCCTCGTGGTGCTGTGGAATCTTCCAAAGACAAGTTTGAAGTTTTCTACATTGATTATGGAAACCAAGAAGTTGTTTCTTACAGTCAGTTGCGGCCTCTAGAAGCATCTGTTTCCTCCAGTCCTGGTCTAGCTCAGCTCTGCAGTCTTGCCCATGTTAAAGTTCCTGGGCTAGAGGATGATTATGGTCAGGAAGCAGCTTACCGGCTAAGTGAGCTTCTTCTAAGTGGACCAAAGGAATTCAGAGCTGCTATCGAGGAAAAAGACGCTTCAGGTGGAAAAGTCAAAGGTCAAGGAACAGGGACAGTCTTTTTGGTGACTTTGGTTGATCCTGAAACTGATGTCAGCATAAATGCTACCTTGCTTAAGGAAGGACTTGCTAGGATGGAGAAAAGGAGGAGGTGGGAGCCCAAGGACAAACAACAGGCTCTAGATGAGTTGGAGAAGTATCAAACAGAAGCACGACAGAAGAGACTTGCAATGTGGGAGTATGGAGATGTCGAGTCAGATGATGAGGATTCTGCTATCCCTGCTAAGAAAGCTGCTGGCAAACGGTGA
Protein Sequence
- >A4A49_34164
MASTGWLKGRVKAVPSGDSLVIMGSSKAEIPPEKSITLASLMAPRLARRGGVDEPFAWQSREFLRKLCIGKEVTFKVEYTVPSIGREYGTVFLGDKNVSMLVVASGWAKVREQGQQKDANPYLKSLQDAEEQAKQQGLGRWSRAPGASEASIRNLPPSAIGDPSIFDARGLLEESKGKLIEAFVEQVRDGSTLRVYLLPDFQFIQVFVAGIQAPTMGRRATSETVVNASITSDEPNRESTTEPRATPTTAQRLAASAASVSEVAPDPYGREAKHFTETRVLNRDVRIVLEGVDKFSNLIGSVYYPDGESAKNLGLELVENGYAKYVDWSANMLEVEVKKQLKDAELQAKKTRLRIWTNYVPPATNSKAIHDQNFTGKVVEVVSGDCLIIADDSLPFGHPSAERRVNLSSIRTPKMGNPRRDEKPAPYAREAKEFLRNRLIGRQVHVSMEYSRKVGMADGPGAPASGTDSRVMDFGSVFLASKDGDDASPAPSAAGNQLAGVNVAELLVSRGFATVVRHRDFEERSNYYDALLSAESRAISGKKGMHSPKEPPVMHVTDLLAGSAKKARDFLPFLQRNRRMSAVVEYVLSGHRFKLFIPKETCSIAFSISGVRCPGRDEPYSEEAIALMRRKIMQRDVEIEVETVDRTGTFLGTLWESRSNVAVTLLEAGLARLQISFGTDRIQDAHLLMQAEQAAKRQKLKVWENYVEGEEVANGGAAEKRQKEEVKVTVTEVLGGGKFYVQLVSDQKVAAIQKQLASLNLQEAPVIGAFNPKKGDIVLAQFSADNSWNRAMIVNAPRGAVESSKDKFEVFYIDYGNQEVVSYSQLRPLEASVSSSPGLAQLCSLAHVKVPGLEDDYGQEAAYRLSELLLSGPKEFRAAIEEKDASGGKVKGQGTGTVFLVTLVDPETDVSINATLLKEGLARMEKRRRWEPKDKQQALDELEKYQTEARQKRLAMWEYGDVESDDEDSAIPAKKAAGKR