Gene Details:
- Gene ID: A4A49_15718
- Suggest Gene Name: ACTIN-RELATED PROTEIN 6, SUPPRESSOR OF FRIGIDA3, EARLY IN SHORT DAYS 1
- Description: putative flowering gene
- Species: Nicotiana attenuata
- Source: Putative flowering gene from PlantCFG
Protein Features:
- Pfam: PF00022
Functional Descriptions:
- Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature through incorporation of variant histone H2A.Z into chromatin.
Homologous
- Arabidopsis thaliana — AT3G33520
Sequences:
CDS Sequence
- >A4A49_15718
ATGGACGAGAAATTCCTTATAGATGATGTAAAAGAGAAACTCTGCTTTGTGTCTTTGGATGTTGCCAGGGACTTGCAGATTGCTAGGAAACCGGGAAATGACAATTTGTTTAGGTGCACCTCCAAAGCAGCAGGAGGACAAACGGATAAGCTGCGGAGCAACGATGGATCAAGAAGAATTGATCTGACAAAAAATGAATTTGGGTTGACAAATGAGCGGTTCCTCGTCCCAGAGATGATGTTTCGTCCAGCTGACTTGGGACTGAATCAGGCTGGACTTGCAGAGTGCATTGTTAGAGCTATCAGTTCCTGCCATTCTCATCTTCAACCTCTTCTCTATGAGAGCATCATTTTGACGGGAGGCACTACTCTATTCCCTCATTTTGCTCAAAGACTAGAAATGGACCTTCGGCCACTTGTCCCATATAAATACCGTTTAAAGATTACGACTCAAGAAGATCCTATACTAGGTGTTTGGCGTGGAGGATCACTCTTGGCATCAAGTCCTGATTTTGATGCAATGTGTGTCACCAAAGCTGAATATGAGGAGCTGGGATCAGCTAGATGTCGAAAGAGATTCTTCCACTAA
Protein Sequence
- >A4A49_15718
MDEKFLIDDVKEKLCFVSLDVARDLQIARKPGNDNLFRCTSKAAGGQTDKLRSNDGSRRIDLTKNEFGLTNERFLVPEMMFRPADLGLNQAGLAECIVRAISSCHSHLQPLLYESIILTGGTTLFPHFAQRLEMDLRPLVPYKYRLKITTQEDPILGVWRGGSLLASSPDFDAMCVTKAEYEELGSARCRKRFFH