Gene Details:

  • Gene ID: A04p029650.1_BraROA
  • Suggest Gene Name: HOMOLOGUE OF TRITHORAX 1 , SET DOMAIN PROTEIN 27
  • Description: putative flowering gene
  • Species: Brassica rapa ro18
  • Source: Putative flowering gene from PlantCFG

Protein Features:

Functional Descriptions:

  • Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P.;Encodes a trithorax group chromatin‐remodelling factor, an homologue of Arabidopsis Trithorax protein1 (ATX1)

Homologous

Sequences:

gDNA Sequence
  • >A04p029650.1_BraROA
    TGGCGTGCGTTGCGGATGAATCCCAGATCGAAATCGACATCCACGGCCGCCACGTCGAAGCTCCGTCTCGCTACGTGTACTCCGTCGCCTCGTCGTCGTGCAATGTCGCCGTCGGTTCCCACAGTCTGATGTCCAAGAAGGTGAAGGCCCGTAAGCTTCCGATGGTTGAGCGATTCGAGGTCGAAGGTAGCAGCGATGTTAGCGCTGATGGCGATTGTTGTCGCCCGGGTGATTACAAGCTGCTGCGTACTGAGATTGTTCGCGTCTACTGTCGCCGCCGTAAGAGGTCGCCGCGGGGGTCTGGGAACGCTGAAAGTTTGAAGCTTGATGAGAGAAATCAGAAGAGGAGAAGAATTGGTGAGGGTTCGAGTGGGCTAAGGAGTGGCTTGAGGGGTTGCAGTGGAGATAAGCAGAAGGAGGCGTCTAGAAGGAAGGGGAGCTCTGTTAAGAGTCAGGACAAGGTGTCTATTGCTTCTGGTTCAACTAAGAGATGGTTCAGGTTAGGGTTTATCTATATCACTTCTCTAACCACTGAAAGTCACTGACTTGTGAAATTTTCTAGAACTCTTGGTTTTGTATGATTAGAGAGAGTTTTGAATTTGCAGGTTGAGTTATGATGATGTGGATCCTAAAAGTTTCGTAGGGCTACAATGCAAGGCAAGTGTTAAACTAGATAATTGTCCGTTTTAAGCTATATTGCATTCCATTTTAACAATCAACTTTTGTTTAATCGCTAGGTTTTTTGGCCGCTGGATGCTTCTTGGTATACAGGTTCCATTGTTGAATACAGTTTAGAGAGAAAGCGTCACATTGTAAGTAGTTCTAGCTACTCTTTGAGTTTTGAGTTTGATTAATTTTGTGAGCTAGGGGATATTCAAAAGCTTGATCCTCTAACGGTGGTTGCATTCTTCTTTAGGTTAAATATGAGGATGGATCTAGTGAGGATCTAGTTCTCGATCGTGAAATGATCAAGTTTTTCGTTTCTCGTGAAGAGATGGAGCTGTTACATCTGAAGATTTGTACTAATGATGTGACTGTTGGTGTCCGTGATTACGAGGAGATGGTTGTATTGGCAGCTAATTTGGAGGATTCTCAAGATTTCGCGCCTGGAGACATTATATGGGCGAAACTATCTGGTTTGTACTTAACTGACTTCTTCTAATTCTGCATATCTTAGAAATCTTTTCTACGCTATCAGAAAACTACCTACTGACCTTCATGGCACTGTGTTTGCTTACCTTTTTCGACAGGTCATGCTATGTGGCCAGCAGTTATTGTGGACGAATCTGTTATTGGAGAGCGGAAAGGTCTAACCAACAAGGTATCTGGAGGGAGATCGATCTTGGTACAATTTTTTGGCACCCATGATTTTGCCAGGTTAGACAATGTCTTCTAAATATCTAAATATCTTGTTTTGCTACTGAATCGTTGAGATGAATGTTACGCATTATCAAAAGCTGAAGTTTAACATCCTTTTGTTGTATAGAATAAAGGTAAAACAAGCAACCTCGTTTCTCAAAGGGCTTCTCGCGCAATCTCACTTGAAGTGCAAACAACCTCGGTTTGAAGAGGGCATGCACGAAGCAAAAATGCAAGTCCCTCTCTTTTAACTTACATTCTACTTTCTCGATTTTCCAGTACTTCGTGCATTAACAATTAGGCCAATAATTATTTCCTTATGTTTCATGAAACATTTTGCCTGTCCTGAAAGTACCATTATTTTGCTTCACCCAGATATCTGAAGGAACATAGGCTTCCAGAAAGGATGACTCAACTTCAAAAAGGAGCTGATTCCGAAAGGACCAATAGTCCAGAAGAAGTCAGCTCAAACTCGGACATTGATCACATGAGTGATGGAGAAGTGTGGTTGAGACCAACAGAAACTGTAGATTTCCGGTATACAATAGGGGATCTGCAAATAATAAATCTCGGTAAGGCTTGGAACTTATAATATGGTGTATCATCCTTAGTGCTATGGTTAATTATTTTCAGTTGGCTATTGGAATGAACTCCATTATCATGAATTGACTTATGACTTTTGTCTTACAGGGAAAATTGTGACAGATTCTCAGTTTTTCAAGGATGAGAATCATATTTGGCCTGAAGGTTATACGGCTATGAGAAAGTACACATCCCTAAAAGGTAATTTGTTAATAAGTTTTTGACTTTTCCTTACTAATAAGGTATTTTCCATATTTGGTTGATTGAAATTAGTTCATAAATGGGCTGTTGCTTTTGGTTTTAAGCAGATCATAGCGCATATGCCTTGTACAAGATGGAAGTGCTCAGAGATGCCGAGTCGAAGACTCGCCCTCTGTTTAGAGTGACTGCAGATAGTGGAGAGCAAGTGAGTAGAAAACATCTAATTACTGTTTCCAACCTTCTATGTGTGTTCTATGTGTTTTGAGGTCCAGCGTGCATCTCTGGCTACCACTGATAACCTTTTTTGGCAGTTCAAAGGGCTTACTCCATCGGCCTGCTGGAATAAGGTATATAACAGGACAAGAAAGGTTCAGAGTGCTACTGATAGTCCTATTTTTGGGGATGAACTAAATGGATCAGACATGTTTGGTCTCTCCAACCCGGAAGTCATTAAACTTGTACAGGTATCTAGTCGTTGCATTTAAACTGATTTGTATGCTTCTAGTGATTGCACCTAATATGCGTTGCACCTTTATAACCCATCATCTAGCAGGGTTTATCAAAATCTAGACTATCGTCCAATGTTTCTATAAGCAAACATAGTTTGGGAAAGCGTCAAGATCATCTTACTGGTTATCGACCTGTTCGTGTTGACTGGAAAGATCTCGATAAGTGCAATGTCTGCCACATGGATGAGGTTAAGCATGCATCTTTTTGTTTCTCGATAGGAGATTTCAATCTTTTGCGCTTTAACAAGTTAGTTCTGAATTCTGATTTATATTTTTTTTCTGTCTGCAGGAGTATGAAAACAATTTGTTCCTGCAATGTGATAAATGTAGAATAATGGTATTGTTCATGCTCTGAGCTTTTCTCGTTAACATATGCCTCTTAGATCTACACTCTGTAGTGCTTTGTGTGACTCAAATTGAAATTGCTTGTCCACTACTAGGTCCATGCTGGATGCTATGGAGAGATAGAACCCTGTGATGGTGCTTTGTGGTTATGCAACTTATGCCGTCCTGGAGCTCCTGATATACATCCACGCTGTTGTCTTTGTCCTGTAGTAGGTAATTTGACCGTATCATTTAGCGTGTGGAGTATTTATGTCCTTTCATTAGTGTATAATAAAAACTTCTTTTAGGGGGTGTTATGAAGCCGACAACTGATGGGCGCTGGGCTCATCTAGCTTGTGCTATATGGATACCAGGTTCGATATTTATGATTTGTTGTTTTGTATAGATTAGTTTCTACTGAAGAAATAGATGGCATTTTACCATATTTGAAACTTGCTATTTCAACAGAAACGTGTCTATCTGATGTCAAGAAGATGGAACCGATTGATGGGGTGAATAAAATCAGTAAGGTTGGTGGTCATTTTTCTTTTTGTGTTTCCTTTACACCGTCACTGTGGGCTTTTCAGAAATCTTATTCCTCTTCCTTTTTTGCTGAATTCTTAAAACTAGGATCGCTGGAAACTAATGTGCACCATCTGTGCGGTATCTTATGGAGCTTGTATCCAAGTAAGATTTCTTTCTGTGATAATAGAAGCTAAATCGTTCTTATGCATTGTGATGGATTCCCGGTACACAATTATCTAGTTGAAATTGCCTAATGAAAATGCTGCCGATATTACTGGGTTTAAGTAGAAGAAATGCAGCATAATTTTCTGATCATTCCTGTAAATATTTTTGGTTGTGCTTCTGTAGTTGGTGACCTTTTACAGATAGTATCATATCAACTTGTTGGTTTTTTCTAAGAAGCGATGATGCATATATAGATTCATTTGGCAAGAATGTGTGTCATATGAGTTTTTCAGAGGAGATCTTAGTGCTTATTTACTTTTTGTTTATGTCCACTGGCCAAATCACATGCCCTTTTCTTATTGAACTAGATTTTTGAAATATTGCATTGTGATATCTTTTAAAGTTAAGTTATGTTTGCCATTTAGCATGTGTATGAGTTGTGTTCCAAACAACTGTATATGCCTTTGTTACTGTCAAAGGCCAGCGATGAGTTGATATAATGTTAAAAGTGACTACATTTTTTCAGTGTTCAAACGATTCTTGTCGTGTGGCATATCATCCACTTTGCGCGCGAGCTTCTGGTCTATGTGTTGAGGTACTTTCATATCTTGCACACAAGTGATACTCAAAACACAGCTAGTCCATAAGAGATGTTTTTAAATGATGATGGCTATCTTGACCGTCTATGTAGCTTGAGAGTGAGGATAAGATTTTTCTTCGACCAAAGGAGGATGAAGAAGCAGATCAGTGTATCCGCATGCGCTCATTCTGCAAGAGGCATCGACAAACATCAACTGCCTGCCTAGAATCAAAAGACATGATCAAACCCACTACGCATAAAAATTCCGACTATCTCCCACCACCTAATCCATCTTGCTGTGCTCGTACTGGTATGTAGCTACTGCGTCTATCTTTGGGTTCTAGGATTAAACTTTAGATTACACCATGTGTTTTTTTGTTTGTTAATCTTTCATGTTCTTACAAATCCTCTTGGAATAGTAGTTTCCTATTTTATATACAAACGTTTTTTATATATTTAATACAAAGGTTTAATCTTAAGCATTTTTCACATTCTTTTTCACTTTTAGTAATGTCCTACGTTTCAGCAGCATAGATGATCCATCTCAACATATTTTTGGTCTATTGTTGCAGAGCCTTATAATTTTCTTGGAAGAAGAGGGCGGAAGGAGCCTGAAGCTCTTGCGGCTGCTTCTTCAAAGCGGTTTTTTGTTGAGAATCAGCCATACCTTGTCGGTGGTTACTCTCGAAATGAGGTTTCAACCTATGAGTGCATTCGCGGATCAAAGGTGTCACAGATGAATACACCAACCAACATCGTTTCTATGGCTGAGAAATATAAATACATGAAGGAAACATACAAGAAGAGATTAACATTTGGTAAGCATTCGTTCTTCTTGAATTAGCAGCAAATCTTAAAAGGATATCACAGGTCTTTCAAAGTTATGCTGCGATCAAAAATAGTACGATGTCTGTAAGATCCTAAAAGTTCTTATTTTCTTTTCAGGGAAATCAGGAATTCATGGTTTTGGCATCTTTGGAAAGCTTCCGCATAGGGCTGGAGATATGGTGAGCATACTTAACCTGTACAGGAAGTTCCATCTTTGGAAAGTATCACTCAAGAAAATATTTGTATGATTTCGATGTAGGTGATTGAATACACCGGAGAACTTGTTAGACCTTCAATAGCTGACAAAAGAGAACGTCTTATCTACAATTCAATGGTGGTAAGCAGTTCTAACTATCTTTGTACATTTGTGTGCTGCATATATGGTAGATTCTATGAACAAAACTGGAAGAATGTATCAGCGGATTGATATGTAGCTTTATTCATCTATCTCTACATTATTTCATAACATTCCTCTAAAAGTATAAATCATGGATGATTTCATAAGTATCTGAGAAAGTTATTTGTTTCTTACGTGATAGGGTGCGGGTACTTATATGTTTAGAATTGATGACGAGCGGGTCATAGATGCTACGAGGGCAGGAAGCATTGCCCACCTGATTAATCACTCCTGTGTGGTATGTCTATGGCTCATCACTCTTAATGCTTGTATTCGATTGGGTTAACATCTACAGAAACTAAGCATTTTTATACTTACTTTTGTGCAGCCAAATTGCTACTCGAGGGTCATCAGTGTTAATGGAGATGAACACATTATCATTTTCGCAAAGAGGGATATAGCTAAATGGGAAGAGCTGACTTATGACTACAGGTTTCATTTTCATGCCATTTGGATCATATCTGAGATAATTCTATAATCATTTAGCTAACGCTTATCTTCTAACTTACAGGTTCTTGTCAGTCGATGAGCGGCTTTCATGTTCATGTGGCTTTCCAGGGTGTCGAGGTGTTGTTAATGATACAGTAGCTGAAGAACAACTGTCGAAGATTTATGTTCCTCGCTCTGATCTAATAGAGTGGACCGGATAA
CDS Sequence
  • >A04p029650.1_BraROA
    ATGGCGTGCGTTGCGGATGAATCCCAGATCGAAATCGACATCCACGGCCGCCACGTCGAAGCTCCGTCTCGCTACGTGTACTCCGTCGCCTCGTCGTCGTGCAATGTCGCCGTCGGTTCCCACAGTCTGATGTCCAAGAAGGTGAAGGCCCGTAAGCTTCCGATGGTTGAGCGATTCGAGGTCGAAGGTAGCAGCGATGTTAGCGCTGATGGCGATTGTTGTCGCCCGGGTGATTACAAGCTGCTGCGTACTGAGATTGTTCGCGTCTACTGTCGCCGCCGTAAGAGGTCGCCGCGGGGGTCTGGGAACGCTGAAAGTTTGAAGCTTGATGAGAGAAATCAGAAGAGGAGAAGAATTGGTGAGGGTTCGAGTGGGCTAAGGAGTGGCTTGAGGGGTTGCAGTGGAGATAAGCAGAAGGAGGCGTCTAGAAGGAAGGGGAGCTCTGTTAAGAGTCAGGACAAGGTGTCTATTGCTTCTGGTTCAACTAAGAGATGGTTCAGGTTGAGTTATGATGATGTGGATCCTAAAAGTTTCGTAGGGCTACAATGCAAGGCAAGTGTTTTTTGGCCGCTGGATGCTTCTTGGTATACAGGTTCCATTGTTGAATACAGTTTAGAGAGAAAGCGTCACATTGTTAAATATGAGGATGGATCTAGTGAGGATCTAGTTCTCGATCGTGAAATGATCAAGTTTTTCGTTTCTCGTGAAGAGATGGAGCTGTTACATCTGAAGATTTGTACTAATGATGTGACTGTTGGTGTCCGTGATTACGAGGAGATGGTTGTATTGGCAGCTAATTTGGAGGATTCTCAAGATTTCGCGCCTGGAGACATTATATGGGCGAAACTATCTGGTCATGCTATGTGGCCAGCAGTTATTGTGGACGAATCTGTTATTGGAGAGCGGAAAGGTCTAACCAACAAGGTATCTGGAGGGAGATCGATCTTGGTACAATTTTTTGGCACCCATGATTTTGCCAGAATAAAGGTAAAACAAGCAACCTCGTTTCTCAAAGGGCTTCTCGCGCAATCTCACTTGAAGTGCAAACAACCTCGATATCTGAAGGAACATAGGCTTCCAGAAAGGATGACTCAACTTCAAAAAGGAGCTGATTCCGAAAGGACCAATAGTCCAGAAGAAGTCAGCTCAAACTCGGACATTGATCACATGAGTGATGGAGAAGTGTGGTTGAGACCAACAGAAACTGTAGATTTCCGGTATACAATAGGGGATCTGCAAATAATAAATCTCGGGAAAATTGTGACAGATTCTCAGTTTTTCAAGGATGAGAATCATATTTGGCCTGAAGGTTATACGGCTATGAGAAAGTACACATCCCTAAAAGATCATAGCGCATATGCCTTGTACAAGATGGAAGTGCTCAGAGATGCCGAGTCGAAGACTCGCCCTCTGTTTAGAGTGACTGCAGATAGTGGAGAGCAACGTGCATCTCTGGCTACCACTGATAACCTTTTTTGGCAGTTCAAAGGGCTTACTCCATCGGCCTGCTGGAATAAGGTATATAACAGGACAAGAAAGGTTCAGAGTGCTACTGATAGTCCTATTTTTGGGGATGAACTAAATGGATCAGACATGTTTGGTCTCTCCAACCCGGAAGTCATTAAACTTGTACAGGGTTTATCAAAATCTAGACTATCGTCCAATGTTTCTATAAGCAAACATAGTTTGGGAAAGCGTCAAGATCATCTTACTGGTTATCGACCTGTTCGTGTTGACTGGAAAGATCTCGATAAGTGCAATGTCTGCCACATGGATGAGGAGTATGAAAACAATTTGTTCCTGCAATGTGATAAATGTAGAATAATGGTCCATGCTGGATGCTATGGAGAGATAGAACCCTGTGATGGTGCTTTGTGGTTATGCAACTTATGCCGTCCTGGAGCTCCTGATATACATCCACGCTGTTGTCTTTGTCCTGTAGTAGGGGGTGTTATGAAGCCGACAACTGATGGGCGCTGGGCTCATCTAGCTTGTGCTATATGGATACCAGAAACGTGTCTATCTGATGTCAAGAAGATGGAACCGATTGATGGGGTGAATAAAATCAGTAAGGATCGCTGGAAACTAATGTGCACCATCTGTGCGGTATCTTATGGAGCTTGTATCCAATGTTCAAACGATTCTTGTCGTGTGGCATATCATCCACTTTGCGCGCGAGCTTCTGGTCTATGTGTTGAGCTTGAGAGTGAGGATAAGATTTTTCTTCGACCAAAGGAGGATGAAGAAGCAGATCAGTGTATCCGCATGCGCTCATTCTGCAAGAGGCATCGACAAACATCAACTGCCTGCCTAGAATCAAAAGACATGATCAAACCCACTACGCATAAAAATTCCGACTATCTCCCACCACCTAATCCATCTTGCTGTGCTCGTACTGAGCCTTATAATTTTCTTGGAAGAAGAGGGCGGAAGGAGCCTGAAGCTCTTGCGGCTGCTTCTTCAAAGCGGTTTTTTGTTGAGAATCAGCCATACCTTGTCGGTGGTTACTCTCGAAATGAGGTTTCAACCTATGAGTGCATTCGCGGATCAAAGGTGTCACAGATGAATACACCAACCAACATCGTTTCTATGGCTGAGAAATATAAATACATGAAGGAAACATACAAGAAGAGATTAACATTTGGGAAATCAGGAATTCATGGTTTTGGCATCTTTGGAAAGCTTCCGCATAGGGCTGGAGATATGGTGATTGAATACACCGGAGAACTTGTTAGACCTTCAATAGCTGACAAAAGAGAACGTCTTATCTACAATTCAATGGTGGGTGCGGGTACTTATATGTTTAGAATTGATGACGAGCGGGTCATAGATGCTACGAGGGCAGGAAGCATTGCCCACCTGATTAATCACTCCTGTGTGCCAAATTGCTACTCGAGGGTCATCAGTGTTAATGGAGATGAACACATTATCATTTTCGCAAAGAGGGATATAGCTAAATGGGAAGAGCTGACTTATGACTACAGGTTCTTGTCAGTCGATGAGCGGCTTTCATGTTCATGTGGCTTTCCAGGGTGTCGAGGTGTTGTTAATGATACAGTAGCTGAAGAACAACTGTCGAAGATTTATGTTCCTCGCTCTGATCTAATAGAGTGGACCGGATAA
Protein Sequence
  • >A04p029650.1_BraROA
    MACVADESQIEIDIHGRHVEAPSRYVYSVASSSCNVAVGSHSLMSKKVKARKLPMVERFEVEGSSDVSADGDCCRPGDYKLLRTEIVRVYCRRRKRSPRGSGNAESLKLDERNQKRRRIGEGSSGLRSGLRGCSGDKQKEASRRKGSSVKSQDKVSIASGSTKRWFRLSYDDVDPKSFVGLQCKASVFWPLDASWYTGSIVEYSLERKRHIVKYEDGSSEDLVLDREMIKFFVSREEMELLHLKICTNDVTVGVRDYEEMVVLAANLEDSQDFAPGDIIWAKLSGHAMWPAVIVDESVIGERKGLTNKVSGGRSILVQFFGTHDFARIKVKQATSFLKGLLAQSHLKCKQPRYLKEHRLPERMTQLQKGADSERTNSPEEVSSNSDIDHMSDGEVWLRPTETVDFRYTIGDLQIINLGKIVTDSQFFKDENHIWPEGYTAMRKYTSLKDHSAYALYKMEVLRDAESKTRPLFRVTADSGEQRASLATTDNLFWQFKGLTPSACWNKVYNRTRKVQSATDSPIFGDELNGSDMFGLSNPEVIKLVQGLSKSRLSSNVSISKHSLGKRQDHLTGYRPVRVDWKDLDKCNVCHMDEEYENNLFLQCDKCRIMVHAGCYGEIEPCDGALWLCNLCRPGAPDIHPRCCLCPVVGGVMKPTTDGRWAHLACAIWIPETCLSDVKKMEPIDGVNKISKDRWKLMCTICAVSYGACIQCSNDSCRVAYHPLCARASGLCVELESEDKIFLRPKEDEEADQCIRMRSFCKRHRQTSTACLESKDMIKPTTHKNSDYLPPPNPSCCARTEPYNFLGRRGRKEPEALAAASSKRFFVENQPYLVGGYSRNEVSTYECIRGSKVSQMNTPTNIVSMAEKYKYMKETYKKRLTFGKSGIHGFGIFGKLPHRAGDMVIEYTGELVRPSIADKRERLIYNSMVGAGTYMFRIDDERVIDATRAGSIAHLINHSCVPNCYSRVISVNGDEHIIIFAKRDIAKWEELTYDYRFLSVDERLSCSCGFPGCRGVVNDTVAEEQLSKIYVPRSDLIEWTG