Gene Details:
- Gene ID: A04p029650.1_BraROA
- Suggest Gene Name: HOMOLOGUE OF TRITHORAX 1 , SET DOMAIN PROTEIN 27
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P.;Encodes a trithorax group chromatin‐remodelling factor, an homologue of Arabidopsis Trithorax protein1 (ATX1)
Homologous
- Arabidopsis thaliana — AT2G31650
- Oryza sativa — LOC_Os09g04890
Sequences:
gDNA Sequence
- >A04p029650.1_BraROA
TGGCGTGCGTTGCGGATGAATCCCAGATCGAAATCGACATCCACGGCCGCCACGTCGAAGCTCCGTCTCGCTACGTGTACTCCGTCGCCTCGTCGTCGTGCAATGTCGCCGTCGGTTCCCACAGTCTGATGTCCAAGAAGGTGAAGGCCCGTAAGCTTCCGATGGTTGAGCGATTCGAGGTCGAAGGTAGCAGCGATGTTAGCGCTGATGGCGATTGTTGTCGCCCGGGTGATTACAAGCTGCTGCGTACTGAGATTGTTCGCGTCTACTGTCGCCGCCGTAAGAGGTCGCCGCGGGGGTCTGGGAACGCTGAAAGTTTGAAGCTTGATGAGAGAAATCAGAAGAGGAGAAGAATTGGTGAGGGTTCGAGTGGGCTAAGGAGTGGCTTGAGGGGTTGCAGTGGAGATAAGCAGAAGGAGGCGTCTAGAAGGAAGGGGAGCTCTGTTAAGAGTCAGGACAAGGTGTCTATTGCTTCTGGTTCAACTAAGAGATGGTTCAGGTTAGGGTTTATCTATATCACTTCTCTAACCACTGAAAGTCACTGACTTGTGAAATTTTCTAGAACTCTTGGTTTTGTATGATTAGAGAGAGTTTTGAATTTGCAGGTTGAGTTATGATGATGTGGATCCTAAAAGTTTCGTAGGGCTACAATGCAAGGCAAGTGTTAAACTAGATAATTGTCCGTTTTAAGCTATATTGCATTCCATTTTAACAATCAACTTTTGTTTAATCGCTAGGTTTTTTGGCCGCTGGATGCTTCTTGGTATACAGGTTCCATTGTTGAATACAGTTTAGAGAGAAAGCGTCACATTGTAAGTAGTTCTAGCTACTCTTTGAGTTTTGAGTTTGATTAATTTTGTGAGCTAGGGGATATTCAAAAGCTTGATCCTCTAACGGTGGTTGCATTCTTCTTTAGGTTAAATATGAGGATGGATCTAGTGAGGATCTAGTTCTCGATCGTGAAATGATCAAGTTTTTCGTTTCTCGTGAAGAGATGGAGCTGTTACATCTGAAGATTTGTACTAATGATGTGACTGTTGGTGTCCGTGATTACGAGGAGATGGTTGTATTGGCAGCTAATTTGGAGGATTCTCAAGATTTCGCGCCTGGAGACATTATATGGGCGAAACTATCTGGTTTGTACTTAACTGACTTCTTCTAATTCTGCATATCTTAGAAATCTTTTCTACGCTATCAGAAAACTACCTACTGACCTTCATGGCACTGTGTTTGCTTACCTTTTTCGACAGGTCATGCTATGTGGCCAGCAGTTATTGTGGACGAATCTGTTATTGGAGAGCGGAAAGGTCTAACCAACAAGGTATCTGGAGGGAGATCGATCTTGGTACAATTTTTTGGCACCCATGATTTTGCCAGGTTAGACAATGTCTTCTAAATATCTAAATATCTTGTTTTGCTACTGAATCGTTGAGATGAATGTTACGCATTATCAAAAGCTGAAGTTTAACATCCTTTTGTTGTATAGAATAAAGGTAAAACAAGCAACCTCGTTTCTCAAAGGGCTTCTCGCGCAATCTCACTTGAAGTGCAAACAACCTCGGTTTGAAGAGGGCATGCACGAAGCAAAAATGCAAGTCCCTCTCTTTTAACTTACATTCTACTTTCTCGATTTTCCAGTACTTCGTGCATTAACAATTAGGCCAATAATTATTTCCTTATGTTTCATGAAACATTTTGCCTGTCCTGAAAGTACCATTATTTTGCTTCACCCAGATATCTGAAGGAACATAGGCTTCCAGAAAGGATGACTCAACTTCAAAAAGGAGCTGATTCCGAAAGGACCAATAGTCCAGAAGAAGTCAGCTCAAACTCGGACATTGATCACATGAGTGATGGAGAAGTGTGGTTGAGACCAACAGAAACTGTAGATTTCCGGTATACAATAGGGGATCTGCAAATAATAAATCTCGGTAAGGCTTGGAACTTATAATATGGTGTATCATCCTTAGTGCTATGGTTAATTATTTTCAGTTGGCTATTGGAATGAACTCCATTATCATGAATTGACTTATGACTTTTGTCTTACAGGGAAAATTGTGACAGATTCTCAGTTTTTCAAGGATGAGAATCATATTTGGCCTGAAGGTTATACGGCTATGAGAAAGTACACATCCCTAAAAGGTAATTTGTTAATAAGTTTTTGACTTTTCCTTACTAATAAGGTATTTTCCATATTTGGTTGATTGAAATTAGTTCATAAATGGGCTGTTGCTTTTGGTTTTAAGCAGATCATAGCGCATATGCCTTGTACAAGATGGAAGTGCTCAGAGATGCCGAGTCGAAGACTCGCCCTCTGTTTAGAGTGACTGCAGATAGTGGAGAGCAAGTGAGTAGAAAACATCTAATTACTGTTTCCAACCTTCTATGTGTGTTCTATGTGTTTTGAGGTCCAGCGTGCATCTCTGGCTACCACTGATAACCTTTTTTGGCAGTTCAAAGGGCTTACTCCATCGGCCTGCTGGAATAAGGTATATAACAGGACAAGAAAGGTTCAGAGTGCTACTGATAGTCCTATTTTTGGGGATGAACTAAATGGATCAGACATGTTTGGTCTCTCCAACCCGGAAGTCATTAAACTTGTACAGGTATCTAGTCGTTGCATTTAAACTGATTTGTATGCTTCTAGTGATTGCACCTAATATGCGTTGCACCTTTATAACCCATCATCTAGCAGGGTTTATCAAAATCTAGACTATCGTCCAATGTTTCTATAAGCAAACATAGTTTGGGAAAGCGTCAAGATCATCTTACTGGTTATCGACCTGTTCGTGTTGACTGGAAAGATCTCGATAAGTGCAATGTCTGCCACATGGATGAGGTTAAGCATGCATCTTTTTGTTTCTCGATAGGAGATTTCAATCTTTTGCGCTTTAACAAGTTAGTTCTGAATTCTGATTTATATTTTTTTTCTGTCTGCAGGAGTATGAAAACAATTTGTTCCTGCAATGTGATAAATGTAGAATAATGGTATTGTTCATGCTCTGAGCTTTTCTCGTTAACATATGCCTCTTAGATCTACACTCTGTAGTGCTTTGTGTGACTCAAATTGAAATTGCTTGTCCACTACTAGGTCCATGCTGGATGCTATGGAGAGATAGAACCCTGTGATGGTGCTTTGTGGTTATGCAACTTATGCCGTCCTGGAGCTCCTGATATACATCCACGCTGTTGTCTTTGTCCTGTAGTAGGTAATTTGACCGTATCATTTAGCGTGTGGAGTATTTATGTCCTTTCATTAGTGTATAATAAAAACTTCTTTTAGGGGGTGTTATGAAGCCGACAACTGATGGGCGCTGGGCTCATCTAGCTTGTGCTATATGGATACCAGGTTCGATATTTATGATTTGTTGTTTTGTATAGATTAGTTTCTACTGAAGAAATAGATGGCATTTTACCATATTTGAAACTTGCTATTTCAACAGAAACGTGTCTATCTGATGTCAAGAAGATGGAACCGATTGATGGGGTGAATAAAATCAGTAAGGTTGGTGGTCATTTTTCTTTTTGTGTTTCCTTTACACCGTCACTGTGGGCTTTTCAGAAATCTTATTCCTCTTCCTTTTTTGCTGAATTCTTAAAACTAGGATCGCTGGAAACTAATGTGCACCATCTGTGCGGTATCTTATGGAGCTTGTATCCAAGTAAGATTTCTTTCTGTGATAATAGAAGCTAAATCGTTCTTATGCATTGTGATGGATTCCCGGTACACAATTATCTAGTTGAAATTGCCTAATGAAAATGCTGCCGATATTACTGGGTTTAAGTAGAAGAAATGCAGCATAATTTTCTGATCATTCCTGTAAATATTTTTGGTTGTGCTTCTGTAGTTGGTGACCTTTTACAGATAGTATCATATCAACTTGTTGGTTTTTTCTAAGAAGCGATGATGCATATATAGATTCATTTGGCAAGAATGTGTGTCATATGAGTTTTTCAGAGGAGATCTTAGTGCTTATTTACTTTTTGTTTATGTCCACTGGCCAAATCACATGCCCTTTTCTTATTGAACTAGATTTTTGAAATATTGCATTGTGATATCTTTTAAAGTTAAGTTATGTTTGCCATTTAGCATGTGTATGAGTTGTGTTCCAAACAACTGTATATGCCTTTGTTACTGTCAAAGGCCAGCGATGAGTTGATATAATGTTAAAAGTGACTACATTTTTTCAGTGTTCAAACGATTCTTGTCGTGTGGCATATCATCCACTTTGCGCGCGAGCTTCTGGTCTATGTGTTGAGGTACTTTCATATCTTGCACACAAGTGATACTCAAAACACAGCTAGTCCATAAGAGATGTTTTTAAATGATGATGGCTATCTTGACCGTCTATGTAGCTTGAGAGTGAGGATAAGATTTTTCTTCGACCAAAGGAGGATGAAGAAGCAGATCAGTGTATCCGCATGCGCTCATTCTGCAAGAGGCATCGACAAACATCAACTGCCTGCCTAGAATCAAAAGACATGATCAAACCCACTACGCATAAAAATTCCGACTATCTCCCACCACCTAATCCATCTTGCTGTGCTCGTACTGGTATGTAGCTACTGCGTCTATCTTTGGGTTCTAGGATTAAACTTTAGATTACACCATGTGTTTTTTTGTTTGTTAATCTTTCATGTTCTTACAAATCCTCTTGGAATAGTAGTTTCCTATTTTATATACAAACGTTTTTTATATATTTAATACAAAGGTTTAATCTTAAGCATTTTTCACATTCTTTTTCACTTTTAGTAATGTCCTACGTTTCAGCAGCATAGATGATCCATCTCAACATATTTTTGGTCTATTGTTGCAGAGCCTTATAATTTTCTTGGAAGAAGAGGGCGGAAGGAGCCTGAAGCTCTTGCGGCTGCTTCTTCAAAGCGGTTTTTTGTTGAGAATCAGCCATACCTTGTCGGTGGTTACTCTCGAAATGAGGTTTCAACCTATGAGTGCATTCGCGGATCAAAGGTGTCACAGATGAATACACCAACCAACATCGTTTCTATGGCTGAGAAATATAAATACATGAAGGAAACATACAAGAAGAGATTAACATTTGGTAAGCATTCGTTCTTCTTGAATTAGCAGCAAATCTTAAAAGGATATCACAGGTCTTTCAAAGTTATGCTGCGATCAAAAATAGTACGATGTCTGTAAGATCCTAAAAGTTCTTATTTTCTTTTCAGGGAAATCAGGAATTCATGGTTTTGGCATCTTTGGAAAGCTTCCGCATAGGGCTGGAGATATGGTGAGCATACTTAACCTGTACAGGAAGTTCCATCTTTGGAAAGTATCACTCAAGAAAATATTTGTATGATTTCGATGTAGGTGATTGAATACACCGGAGAACTTGTTAGACCTTCAATAGCTGACAAAAGAGAACGTCTTATCTACAATTCAATGGTGGTAAGCAGTTCTAACTATCTTTGTACATTTGTGTGCTGCATATATGGTAGATTCTATGAACAAAACTGGAAGAATGTATCAGCGGATTGATATGTAGCTTTATTCATCTATCTCTACATTATTTCATAACATTCCTCTAAAAGTATAAATCATGGATGATTTCATAAGTATCTGAGAAAGTTATTTGTTTCTTACGTGATAGGGTGCGGGTACTTATATGTTTAGAATTGATGACGAGCGGGTCATAGATGCTACGAGGGCAGGAAGCATTGCCCACCTGATTAATCACTCCTGTGTGGTATGTCTATGGCTCATCACTCTTAATGCTTGTATTCGATTGGGTTAACATCTACAGAAACTAAGCATTTTTATACTTACTTTTGTGCAGCCAAATTGCTACTCGAGGGTCATCAGTGTTAATGGAGATGAACACATTATCATTTTCGCAAAGAGGGATATAGCTAAATGGGAAGAGCTGACTTATGACTACAGGTTTCATTTTCATGCCATTTGGATCATATCTGAGATAATTCTATAATCATTTAGCTAACGCTTATCTTCTAACTTACAGGTTCTTGTCAGTCGATGAGCGGCTTTCATGTTCATGTGGCTTTCCAGGGTGTCGAGGTGTTGTTAATGATACAGTAGCTGAAGAACAACTGTCGAAGATTTATGTTCCTCGCTCTGATCTAATAGAGTGGACCGGATAA
CDS Sequence
- >A04p029650.1_BraROA
ATGGCGTGCGTTGCGGATGAATCCCAGATCGAAATCGACATCCACGGCCGCCACGTCGAAGCTCCGTCTCGCTACGTGTACTCCGTCGCCTCGTCGTCGTGCAATGTCGCCGTCGGTTCCCACAGTCTGATGTCCAAGAAGGTGAAGGCCCGTAAGCTTCCGATGGTTGAGCGATTCGAGGTCGAAGGTAGCAGCGATGTTAGCGCTGATGGCGATTGTTGTCGCCCGGGTGATTACAAGCTGCTGCGTACTGAGATTGTTCGCGTCTACTGTCGCCGCCGTAAGAGGTCGCCGCGGGGGTCTGGGAACGCTGAAAGTTTGAAGCTTGATGAGAGAAATCAGAAGAGGAGAAGAATTGGTGAGGGTTCGAGTGGGCTAAGGAGTGGCTTGAGGGGTTGCAGTGGAGATAAGCAGAAGGAGGCGTCTAGAAGGAAGGGGAGCTCTGTTAAGAGTCAGGACAAGGTGTCTATTGCTTCTGGTTCAACTAAGAGATGGTTCAGGTTGAGTTATGATGATGTGGATCCTAAAAGTTTCGTAGGGCTACAATGCAAGGCAAGTGTTTTTTGGCCGCTGGATGCTTCTTGGTATACAGGTTCCATTGTTGAATACAGTTTAGAGAGAAAGCGTCACATTGTTAAATATGAGGATGGATCTAGTGAGGATCTAGTTCTCGATCGTGAAATGATCAAGTTTTTCGTTTCTCGTGAAGAGATGGAGCTGTTACATCTGAAGATTTGTACTAATGATGTGACTGTTGGTGTCCGTGATTACGAGGAGATGGTTGTATTGGCAGCTAATTTGGAGGATTCTCAAGATTTCGCGCCTGGAGACATTATATGGGCGAAACTATCTGGTCATGCTATGTGGCCAGCAGTTATTGTGGACGAATCTGTTATTGGAGAGCGGAAAGGTCTAACCAACAAGGTATCTGGAGGGAGATCGATCTTGGTACAATTTTTTGGCACCCATGATTTTGCCAGAATAAAGGTAAAACAAGCAACCTCGTTTCTCAAAGGGCTTCTCGCGCAATCTCACTTGAAGTGCAAACAACCTCGATATCTGAAGGAACATAGGCTTCCAGAAAGGATGACTCAACTTCAAAAAGGAGCTGATTCCGAAAGGACCAATAGTCCAGAAGAAGTCAGCTCAAACTCGGACATTGATCACATGAGTGATGGAGAAGTGTGGTTGAGACCAACAGAAACTGTAGATTTCCGGTATACAATAGGGGATCTGCAAATAATAAATCTCGGGAAAATTGTGACAGATTCTCAGTTTTTCAAGGATGAGAATCATATTTGGCCTGAAGGTTATACGGCTATGAGAAAGTACACATCCCTAAAAGATCATAGCGCATATGCCTTGTACAAGATGGAAGTGCTCAGAGATGCCGAGTCGAAGACTCGCCCTCTGTTTAGAGTGACTGCAGATAGTGGAGAGCAACGTGCATCTCTGGCTACCACTGATAACCTTTTTTGGCAGTTCAAAGGGCTTACTCCATCGGCCTGCTGGAATAAGGTATATAACAGGACAAGAAAGGTTCAGAGTGCTACTGATAGTCCTATTTTTGGGGATGAACTAAATGGATCAGACATGTTTGGTCTCTCCAACCCGGAAGTCATTAAACTTGTACAGGGTTTATCAAAATCTAGACTATCGTCCAATGTTTCTATAAGCAAACATAGTTTGGGAAAGCGTCAAGATCATCTTACTGGTTATCGACCTGTTCGTGTTGACTGGAAAGATCTCGATAAGTGCAATGTCTGCCACATGGATGAGGAGTATGAAAACAATTTGTTCCTGCAATGTGATAAATGTAGAATAATGGTCCATGCTGGATGCTATGGAGAGATAGAACCCTGTGATGGTGCTTTGTGGTTATGCAACTTATGCCGTCCTGGAGCTCCTGATATACATCCACGCTGTTGTCTTTGTCCTGTAGTAGGGGGTGTTATGAAGCCGACAACTGATGGGCGCTGGGCTCATCTAGCTTGTGCTATATGGATACCAGAAACGTGTCTATCTGATGTCAAGAAGATGGAACCGATTGATGGGGTGAATAAAATCAGTAAGGATCGCTGGAAACTAATGTGCACCATCTGTGCGGTATCTTATGGAGCTTGTATCCAATGTTCAAACGATTCTTGTCGTGTGGCATATCATCCACTTTGCGCGCGAGCTTCTGGTCTATGTGTTGAGCTTGAGAGTGAGGATAAGATTTTTCTTCGACCAAAGGAGGATGAAGAAGCAGATCAGTGTATCCGCATGCGCTCATTCTGCAAGAGGCATCGACAAACATCAACTGCCTGCCTAGAATCAAAAGACATGATCAAACCCACTACGCATAAAAATTCCGACTATCTCCCACCACCTAATCCATCTTGCTGTGCTCGTACTGAGCCTTATAATTTTCTTGGAAGAAGAGGGCGGAAGGAGCCTGAAGCTCTTGCGGCTGCTTCTTCAAAGCGGTTTTTTGTTGAGAATCAGCCATACCTTGTCGGTGGTTACTCTCGAAATGAGGTTTCAACCTATGAGTGCATTCGCGGATCAAAGGTGTCACAGATGAATACACCAACCAACATCGTTTCTATGGCTGAGAAATATAAATACATGAAGGAAACATACAAGAAGAGATTAACATTTGGGAAATCAGGAATTCATGGTTTTGGCATCTTTGGAAAGCTTCCGCATAGGGCTGGAGATATGGTGATTGAATACACCGGAGAACTTGTTAGACCTTCAATAGCTGACAAAAGAGAACGTCTTATCTACAATTCAATGGTGGGTGCGGGTACTTATATGTTTAGAATTGATGACGAGCGGGTCATAGATGCTACGAGGGCAGGAAGCATTGCCCACCTGATTAATCACTCCTGTGTGCCAAATTGCTACTCGAGGGTCATCAGTGTTAATGGAGATGAACACATTATCATTTTCGCAAAGAGGGATATAGCTAAATGGGAAGAGCTGACTTATGACTACAGGTTCTTGTCAGTCGATGAGCGGCTTTCATGTTCATGTGGCTTTCCAGGGTGTCGAGGTGTTGTTAATGATACAGTAGCTGAAGAACAACTGTCGAAGATTTATGTTCCTCGCTCTGATCTAATAGAGTGGACCGGATAA
Protein Sequence
- >A04p029650.1_BraROA
MACVADESQIEIDIHGRHVEAPSRYVYSVASSSCNVAVGSHSLMSKKVKARKLPMVERFEVEGSSDVSADGDCCRPGDYKLLRTEIVRVYCRRRKRSPRGSGNAESLKLDERNQKRRRIGEGSSGLRSGLRGCSGDKQKEASRRKGSSVKSQDKVSIASGSTKRWFRLSYDDVDPKSFVGLQCKASVFWPLDASWYTGSIVEYSLERKRHIVKYEDGSSEDLVLDREMIKFFVSREEMELLHLKICTNDVTVGVRDYEEMVVLAANLEDSQDFAPGDIIWAKLSGHAMWPAVIVDESVIGERKGLTNKVSGGRSILVQFFGTHDFARIKVKQATSFLKGLLAQSHLKCKQPRYLKEHRLPERMTQLQKGADSERTNSPEEVSSNSDIDHMSDGEVWLRPTETVDFRYTIGDLQIINLGKIVTDSQFFKDENHIWPEGYTAMRKYTSLKDHSAYALYKMEVLRDAESKTRPLFRVTADSGEQRASLATTDNLFWQFKGLTPSACWNKVYNRTRKVQSATDSPIFGDELNGSDMFGLSNPEVIKLVQGLSKSRLSSNVSISKHSLGKRQDHLTGYRPVRVDWKDLDKCNVCHMDEEYENNLFLQCDKCRIMVHAGCYGEIEPCDGALWLCNLCRPGAPDIHPRCCLCPVVGGVMKPTTDGRWAHLACAIWIPETCLSDVKKMEPIDGVNKISKDRWKLMCTICAVSYGACIQCSNDSCRVAYHPLCARASGLCVELESEDKIFLRPKEDEEADQCIRMRSFCKRHRQTSTACLESKDMIKPTTHKNSDYLPPPNPSCCARTEPYNFLGRRGRKEPEALAAASSKRFFVENQPYLVGGYSRNEVSTYECIRGSKVSQMNTPTNIVSMAEKYKYMKETYKKRLTFGKSGIHGFGIFGKLPHRAGDMVIEYTGELVRPSIADKRERLIYNSMVGAGTYMFRIDDERVIDATRAGSIAHLINHSCVPNCYSRVISVNGDEHIIIFAKRDIAKWEELTYDYRFLSVDERLSCSCGFPGCRGVVNDTVAEEQLSKIYVPRSDLIEWTG