Gene Details:
- Gene ID: A04p023660.1_BraROA
- Suggest Gene Name: SU(VAR)3-9-RELATED PROTEIN 5
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes a SET-domain protein SUVR5 that mediates H3K9me2 deposition and silencing at stimulus response genes in a DNA methylation-independent manner.
Homologous
- Arabidopsis thaliana — AT2G23740
Sequences:
gDNA Sequence
- >A04p023660.1_BraROA
TGGAAGTTATGTCTTGTTCGAGCTCACAAGGCGCTGAACAAGTTGAAACTCATGGTGGTCTTACAATGGATGAAATGCTACTTGACGTTGATGTTGAGGAGGCAGCAGTTAATGAATCGGTTTTAAATCCTGAGCTGGATGGTTTGAACGCAGAGAAGCATAGTACCACCGATGTAGTTATCGAAGAAACTGAAAATCTTGGTGGTGATAATGTGGAAGGAGAGTCATCATCTCCTTCTGAGCCTAAATGGCTGCAACAAGATGAACCAGTAGCTTTGTGGGTGAAGGTACTAATCATATCTCTTTCTCTGAGTTTTAAGTTCATATGGTTTTTTAATGTGTTTGGTGTTATTAGTGGAGAGGGAAATGGCAAGCTGGAATCAGATGCGCGAGAGCAGATTGGCCATTGACGACTTTAAGAGGGAAACCAACTCATGATAGAAAAAAGTACTATGTGATCTTTTTCCCACATACAAAGAACTACTCGTGGGCGGATATGCAGCTTGTTAGATCCATCTACGAGTTCCCTGATCCTATTGCATATAAGTCACACAAAGTTGGAGTTAAAATGGTTAAAGATCTTACCGTTGCTCGACGCAACATTATGAGGAAGCTTACCATTGGAATGCTCAATATAGTTGACCAGTTTCACTCAGAGGTATATAAAGCTTGAAACTTATATATTTGAAGCTTCAGAGTGCATTTTTGGTTTCAGCTCTTTGGATGTTGCAGGTTGTTGTTGAGTCAGGTAACGATATAATATTCTGGAAAGAGTTTGCAATGGAGGCTTCTAGAAGCACAAGTTATCAAGAACTTGGAAGAATGCTTGTGAAGCTTCATAGTGTAAGAAGCTCTTGTTAGGCCTTATATTCACTTTCTGTAGTCATCTCTTGACTTTGTGTTATGTTTGTTCAGATGATTTTGCAACGATACATGGATCCAAACTGGCTCGAAAACTCGTTTCCTTCATGGGCACAGAGATGTAATGATGCAATGAACGCCGAGAGTGTTGAGTTGCTGAAAGAGGTAAATGGCTGATATTGTCATCTGATATATATTGTTCAGACGTTTTTTTTTTGTCTTAACCAAGTCTGCTTTTATCTGGTTTTGTGTATAGGAATTTGACAATTGTATCCAATGGAACCAAGTCAAATCCATTTCTGATCCTCAGATGCAACTAATGGTGTTGTCAGAATGGAAAACATGGAAGCATGACGTTACAAAATGGTTCTCAATATCACGCCGTAGCGTTGCAGAAGTAGCACATGAGGATAGTAACAAAAGCATCTTCAACTCAGATGTCCAGGCCAGCCACAAAAGACCAAAACTCGAGATTCGACGTGCTGAGACAACAAACACATCATCACAGATGGAACCTGATACTTCGCCACAAGAGAACACAAATGCTCCTGTGGTGGTGATGAAAGATGAAGATGTGATTATGAACACACCAGTGAATGGTACGGACCTGTGGGACGGCATTGTTGTTGAAGCAAGCGGTTCACAGCTCGTGAAAACAAGAGAGACGAATGATTTGTCACTCACAGTTGTGAAGAAACCGTTTGGTTCTGGAAACAAGAGTCAGCAGTGTACAGCCTTCATTGAATCAAAAGGAAGACAATGTGTGAGATGGGCCAACGAGGGAGATATCTATTGCTGTGTGCATTTAGCTTCGCGTTTCGCCACCAAAGCTATAAAGAGCGAAGCGTCTCCTGCTGCTGCTGAAGCACCAATGTGTGGAGGAGTTACCGTTCTCGGCACCAAATGCAAACACAGATCTCTACCTGGAATGCTGTACTGCAAGAAACACCGTCCTCACACAGAGATGGTGGTGATGACACCTGATAACAACTCCTCATCTCATCTTCTGGTTAAAAGAAAGGCTGCGGAGATGATAGAAGCAACTCAATATCAAGATGTAGTAGTGGTGCCTCCTCCTCCTTTTGTGCCCAATGGAACCACCACTAGCTTCACTGAGATGCTTGAACATTGCAGCAACGAGGATAGCTTGTGCGTGGGTTCTTGCTCAGAGAACAGCTACGTTCCTTGCAACGAGTTCGCCACAAAGCACACGCTATACTGCGAACAGCACCTTCCCAACTGGCTCAAGCGCGCTAGGAACGGGAAGAGCCGGATCATATCGAAAGAAGTGTTTGTAGATCTTCTAAGGAGCTGCTCCTCGCGCGAGGAGAAGCTGCCTCTGCATCAAGCTTGTGATGTTTTCTACAAGCTCTTCAAGAGTCTCTTATCTTTGAGAAACTCCGTCCCGGTTGACCAACAGCTCGAGTGGGCGATATCAGAAGCTTCGAGAGACGCTGACGCTGGAGTTGGGAGGTTCTTGATGAAGCTAGTGTCCCATGAAAAGGAGAGATTAGCTAGGATATGGGGTTTCAACGCTTATGGAGAAGAAGATGCATCAGAATCTCCTCTTGCCATCACCAATGGTAAAGGAGAAGAGACAAGAGACGAAGAGAAATGGTCGTTCGTTGGATTCGCTTGTGCTATCTGTTTAGATTCTTTCGTGAAGCCAAAGCTTCTGGAAGCTCACGTGGAGGAGAGGCATCACGTGCAGTTCGCGGAGAAGTGCATGCTTCTTCAGTGTATACCTTGTGGCAGCAACTTTGGAGATAAAGAACAGCTGCTCGTACATGTTCAAGCCGTGCATCCTTCTGAATGCAAGACGCTAACAGTTGCTTCTGAGTCTCAAAACCACCCTGAAGCAAGTAACTCACAGATCGTTGTAAGCCAAAACATAGAGAGTACAAGTGGTGGTGTACATAGATATGTATGCAAGTTCTGTGGGTTGAAATTTAATTTATTACCTGACCTTGGGCGTCACCATCAGGCGGAACACATGGGAGGACTAGTTACCTCTCGTGGACCGAAGAAAGGGTTAAGGTTTAACAGTACCTACAGGATGAAGTCTGGTAGGCTAAGCCGTCCGAATAAATTCAAGAAGAGTCTTGGAGCAGTCTCATATAGTAGGATTAGAAACCGAGCTGGTGTGAACATGAAGAGGAGGATAATGCAAGATTCTACTAAATCAAAAACTGAATCATCACCGCCTCCGAGTGATAGTACGAACTTTGATAGATCAGAAGATGCTCATTGCTCTGTGGTTTCCAACATATTGTTCTCGAAGATTAAGAAAGCGAAACTTCGTCCTAATAACCAAGATATCTTGTCTGCTGCTCGCTCGGCTTGCTGTAAGGTGAGCCTTGAGAACTCGATGGAGGCTAAATTCGGTGTTTTGCCTGAGAGAGTCTATCTCAAGGCGGCGAAGCTCTGTGGCGAGCATGGTGTGCAAGTGATATGGCATCTGAAAGGTTACATATGCTCCAACGGGTGTAAGCCTTCTAAAGAACCAAATCTTCTATCTCCCTTGATCCCGCGACAAGAGAACGATCGATCCGAGATAGCTGAAGACGCTGGAGAAGCTTCTGATAACGGTTTGGAAGTGGACGAGTGTCATTGTATCATGGAGGCTCATCACTTTACTAAGAGACCGTTTGGAAAGACTAATGTTCTGTGCAATGACATAAGCTTTGGTAAGGAACCAGTTCCGGTGTCTTGCGTCGTGGATGAGGATCTTTTGAAGCAGTGTGAGAAGAAGCCATGGGAATGTTTTACTTATGTTACAAAACCAATGCTTAATCCTTCAGTGGATCTTTCAAAGGAGGTACCTCATCTGTCCTAATCTGAAACAAGATTGTGTCTTCTCTGTTGTAACATTGTTTGTTTGTCTGTCCATGCAGAAACTGCAACTAAAGTGTGGCTGTCCTGGTTCAGTGTGCTCGCCTGTGACTTGTGATCACGTGTACCTTTTCGGTAACGATTTTGAGGAATCTAGAGACATATATGGGAAGTCCATGAGGTGTAGATTCCCGTATGATGACAAAGAACGTATCATTCTGGAGGTAGTTTTTTTTTAGATCTTGTTAATATCATATCCATTACATGTGGTTCAACTAATGATTGTTTCTGGAAATGTTGTAGGAGGGTTATCCTGTTTACGAATGCAATGAGCTCTGTGGATGCTCTAGAACATGTCATAATCGTGTTCTGCAAAATGGAATTCGCACTAAACTTGAAGTTTTTAGGACAGAGAACAAGGTGTGATTCTTTATGAGCCAATCATCCTCTTTATCTGTCTTTGCTTCGATTCCAGTATCCATGTCTGATTGATCAACACAGGGATGGGGAATACGAGCTTGTGAGCATATACTACGTGGCACATTCGTCTGCGAATACATTGGAGAAGTTCTTGATCAGCAAGAGGCAAAAAAGAGACGAACTGAGTACATAGCATTTTCTTAATCTTCTCCCATGTTTGTCTTCTTGCTTGGAACTGAAGTTAAAATCCTGCTTTTGATAACCATAGGTATGGAGAAGATGGTTGCAGCTACATACATGATGTTGATGCTAACATCAACGACATTGGTAGATTAATTGAAGGAGAGACTGATTATGTTATTGATGCTACTACTCATGGAAACGTCTCTAGATTCATCAATCACAGGTGAATCTTAAGTCCCACCAATTCTTTTTTTTTGCATCATTCTACAACTTGACTTGTGATTTTAATCTTTTTTTTTTTCATTTCTAGCTGCTCTCCGAATCTTGTAACGTACCAAGTTGTTGTGGAAAGCATGGAGTCATCTCTTGCTCATATCGGTTTATACGCCAGTACAGATGTAAAACTCTCGTCCTCTTCTCTATTTGCTTGAAAGAAGTTTCTAAACTGTTGGACCTTAATTGATCTTTTTCTCCTTAACAGATAGCTGCAGGAGATGAGATCACGCGAGACTATGGACGCAGACCGGTAACATCTGGACAAGAAAGTGGACATCCATGCCATTGTAGAGCTACAAACTGCAGAGGTTGTTTCTTTTAG
CDS Sequence
- >A04p023660.1_BraROA
ATGGAAGTTATGTCTTGTTCGAGCTCACAAGGCGCTGAACAAGTTGAAACTCATGGTGGTCTTACAATGGATGAAATGCTACTTGACGTTGATGTTGAGGAGGCAGCAGTTAATGAATCGGTTTTAAATCCTGAGCTGGATGGTTTGAACGCAGAGAAGCATAGTACCACCGATGTAGTTATCGAAGAAACTGAAAATCTTGGTGGTGATAATGTGGAAGGAGAGTCATCATCTCCTTCTGAGCCTAAATGGCTGCAACAAGATGAACCAGTAGCTTTGTGGGTGAAGTGGAGAGGGAAATGGCAAGCTGGAATCAGATGCGCGAGAGCAGATTGGCCATTGACGACTTTAAGAGGGAAACCAACTCATGATAGAAAAAAGTACTATGTGATCTTTTTCCCACATACAAAGAACTACTCGTGGGCGGATATGCAGCTTGTTAGATCCATCTACGAGTTCCCTGATCCTATTGCATATAAGTCACACAAAGTTGGAGTTAAAATGGTTAAAGATCTTACCGTTGCTCGACGCAACATTATGAGGAAGCTTACCATTGGAATGCTCAATATAGTTGACCAGTTTCACTCAGAGGTTGTTGTTGAGTCAGGTAACGATATAATATTCTGGAAAGAGTTTGCAATGGAGGCTTCTAGAAGCACAAGTTATCAAGAACTTGGAAGAATGCTTGTGAAGCTTCATAGTATGATTTTGCAACGATACATGGATCCAAACTGGCTCGAAAACTCGTTTCCTTCATGGGCACAGAGATGTAATGATGCAATGAACGCCGAGAGTGTTGAGTTGCTGAAAGAGGAATTTGACAATTGTATCCAATGGAACCAAGTCAAATCCATTTCTGATCCTCAGATGCAACTAATGGTGTTGTCAGAATGGAAAACATGGAAGCATGACGTTACAAAATGGTTCTCAATATCACGCCGTAGCGTTGCAGAAGTAGCACATGAGGATAGTAACAAAAGCATCTTCAACTCAGATGTCCAGGCCAGCCACAAAAGACCAAAACTCGAGATTCGACGTGCTGAGACAACAAACACATCATCACAGATGGAACCTGATACTTCGCCACAAGAGAACACAAATGCTCCTGTGGTGGTGATGAAAGATGAAGATGTGATTATGAACACACCAGTGAATGGTACGGACCTGTGGGACGGCATTGTTGTTGAAGCAAGCGGTTCACAGCTCGTGAAAACAAGAGAGACGAATGATTTGTCACTCACAGTTGTGAAGAAACCGTTTGGTTCTGGAAACAAGAGTCAGCAGTGTACAGCCTTCATTGAATCAAAAGGAAGACAATGTGTGAGATGGGCCAACGAGGGAGATATCTATTGCTGTGTGCATTTAGCTTCGCGTTTCGCCACCAAAGCTATAAAGAGCGAAGCGTCTCCTGCTGCTGCTGAAGCACCAATGTGTGGAGGAGTTACCGTTCTCGGCACCAAATGCAAACACAGATCTCTACCTGGAATGCTGTACTGCAAGAAACACCGTCCTCACACAGAGATGGTGGTGATGACACCTGATAACAACTCCTCATCTCATCTTCTGGTTAAAAGAAAGGCTGCGGAGATGATAGAAGCAACTCAATATCAAGATGTAGTAGTGGTGCCTCCTCCTCCTTTTGTGCCCAATGGAACCACCACTAGCTTCACTGAGATGCTTGAACATTGCAGCAACGAGGATAGCTTGTGCGTGGGTTCTTGCTCAGAGAACAGCTACGTTCCTTGCAACGAGTTCGCCACAAAGCACACGCTATACTGCGAACAGCACCTTCCCAACTGGCTCAAGCGCGCTAGGAACGGGAAGAGCCGGATCATATCGAAAGAAGTGTTTGTAGATCTTCTAAGGAGCTGCTCCTCGCGCGAGGAGAAGCTGCCTCTGCATCAAGCTTGTGATGTTTTCTACAAGCTCTTCAAGAGTCTCTTATCTTTGAGAAACTCCGTCCCGGTTGACCAACAGCTCGAGTGGGCGATATCAGAAGCTTCGAGAGACGCTGACGCTGGAGTTGGGAGGTTCTTGATGAAGCTAGTGTCCCATGAAAAGGAGAGATTAGCTAGGATATGGGGTTTCAACGCTTATGGAGAAGAAGATGCATCAGAATCTCCTCTTGCCATCACCAATGGTAAAGGAGAAGAGACAAGAGACGAAGAGAAATGGTCGTTCGTTGGATTCGCTTGTGCTATCTGTTTAGATTCTTTCGTGAAGCCAAAGCTTCTGGAAGCTCACGTGGAGGAGAGGCATCACGTGCAGTTCGCGGAGAAGTGCATGCTTCTTCAGTGTATACCTTGTGGCAGCAACTTTGGAGATAAAGAACAGCTGCTCGTACATGTTCAAGCCGTGCATCCTTCTGAATGCAAGACGCTAACAGTTGCTTCTGAGTCTCAAAACCACCCTGAAGCAAGTAACTCACAGATCGTTGTAAGCCAAAACATAGAGAGTACAAGTGGTGGTGTACATAGATATGTATGCAAGTTCTGTGGGTTGAAATTTAATTTATTACCTGACCTTGGGCGTCACCATCAGGCGGAACACATGGGAGGACTAGTTACCTCTCGTGGACCGAAGAAAGGGTTAAGGTTTAACAGTACCTACAGGATGAAGTCTGGTAGGCTAAGCCGTCCGAATAAATTCAAGAAGAGTCTTGGAGCAGTCTCATATAGTAGGATTAGAAACCGAGCTGGTGTGAACATGAAGAGGAGGATAATGCAAGATTCTACTAAATCAAAAACTGAATCATCACCGCCTCCGAGTGATAGTACGAACTTTGATAGATCAGAAGATGCTCATTGCTCTGTGGTTTCCAACATATTGTTCTCGAAGATTAAGAAAGCGAAACTTCGTCCTAATAACCAAGATATCTTGTCTGCTGCTCGCTCGGCTTGCTGTAAGGTGAGCCTTGAGAACTCGATGGAGGCTAAATTCGGTGTTTTGCCTGAGAGAGTCTATCTCAAGGCGGCGAAGCTCTGTGGCGAGCATGGTGTGCAAGTGATATGGCATCTGAAAGGTTACATATGCTCCAACGGGTGTAAGCCTTCTAAAGAACCAAATCTTCTATCTCCCTTGATCCCGCGACAAGAGAACGATCGATCCGAGATAGCTGAAGACGCTGGAGAAGCTTCTGATAACGGTTTGGAAGTGGACGAGTGTCATTGTATCATGGAGGCTCATCACTTTACTAAGAGACCGTTTGGAAAGACTAATGTTCTGTGCAATGACATAAGCTTTGGTAAGGAACCAGTTCCGGTGTCTTGCGTCGTGGATGAGGATCTTTTGAAGCAGTGTGAGAAGAAGCCATGGGAATGTTTTACTTATGTTACAAAACCAATGCTTAATCCTTCAGTGGATCTTTCAAAGGAGAAACTGCAACTAAAGTGTGGCTGTCCTGGTTCAGTGTGCTCGCCTGTGACTTGTGATCACGTGTACCTTTTCGGTAACGATTTTGAGGAATCTAGAGACATATATGGGAAGTCCATGAGGTGTAGATTCCCGTATGATGACAAAGAACGTATCATTCTGGAGGAGGGTTATCCTGTTTACGAATGCAATGAGCTCTGTGGATGCTCTAGAACATGTCATAATCGTGTTCTGCAAAATGGAATTCGCACTAAACTTGAAGTTTTTAGGACAGAGAACAAGGGATGGGGAATACGAGCTTGTGAGCATATACTACGTGGCACATTCGTCTGCGAATACATTGGAGAAGTTCTTGATCAGCAAGAGGCAAAAAAGAGACGAACTGAGTATGGAGAAGATGGTTGCAGCTACATACATGATGTTGATGCTAACATCAACGACATTGGTAGATTAATTGAAGGAGAGACTGATTATGTTATTGATGCTACTACTCATGGAAACGTCTCTAGATTCATCAATCACAGCTGCTCTCCGAATCTTGTAACGTACCAAGTTGTTGTGGAAAGCATGGAGTCATCTCTTGCTCATATCGGTTTATACGCCAGTACAGATATAGCTGCAGGAGATGAGATCACGCGAGACTATGGACGCAGACCGGTAACATCTGGACAAGAAAGTGGACATCCATGCCATTGTAGAGCTACAAACTGCAGAGGTTGTTTCTTTTAG
Protein Sequence
- >A04p023660.1_BraROA
MEVMSCSSSQGAEQVETHGGLTMDEMLLDVDVEEAAVNESVLNPELDGLNAEKHSTTDVVIEETENLGGDNVEGESSSPSEPKWLQQDEPVALWVKWRGKWQAGIRCARADWPLTTLRGKPTHDRKKYYVIFFPHTKNYSWADMQLVRSIYEFPDPIAYKSHKVGVKMVKDLTVARRNIMRKLTIGMLNIVDQFHSEVVVESGNDIIFWKEFAMEASRSTSYQELGRMLVKLHSMILQRYMDPNWLENSFPSWAQRCNDAMNAESVELLKEEFDNCIQWNQVKSISDPQMQLMVLSEWKTWKHDVTKWFSISRRSVAEVAHEDSNKSIFNSDVQASHKRPKLEIRRAETTNTSSQMEPDTSPQENTNAPVVVMKDEDVIMNTPVNGTDLWDGIVVEASGSQLVKTRETNDLSLTVVKKPFGSGNKSQQCTAFIESKGRQCVRWANEGDIYCCVHLASRFATKAIKSEASPAAAEAPMCGGVTVLGTKCKHRSLPGMLYCKKHRPHTEMVVMTPDNNSSSHLLVKRKAAEMIEATQYQDVVVVPPPPFVPNGTTTSFTEMLEHCSNEDSLCVGSCSENSYVPCNEFATKHTLYCEQHLPNWLKRARNGKSRIISKEVFVDLLRSCSSREEKLPLHQACDVFYKLFKSLLSLRNSVPVDQQLEWAISEASRDADAGVGRFLMKLVSHEKERLARIWGFNAYGEEDASESPLAITNGKGEETRDEEKWSFVGFACAICLDSFVKPKLLEAHVEERHHVQFAEKCMLLQCIPCGSNFGDKEQLLVHVQAVHPSECKTLTVASESQNHPEASNSQIVVSQNIESTSGGVHRYVCKFCGLKFNLLPDLGRHHQAEHMGGLVTSRGPKKGLRFNSTYRMKSGRLSRPNKFKKSLGAVSYSRIRNRAGVNMKRRIMQDSTKSKTESSPPPSDSTNFDRSEDAHCSVVSNILFSKIKKAKLRPNNQDILSAARSACCKVSLENSMEAKFGVLPERVYLKAAKLCGEHGVQVIWHLKGYICSNGCKPSKEPNLLSPLIPRQENDRSEIAEDAGEASDNGLEVDECHCIMEAHHFTKRPFGKTNVLCNDISFGKEPVPVSCVVDEDLLKQCEKKPWECFTYVTKPMLNPSVDLSKEKLQLKCGCPGSVCSPVTCDHVYLFGNDFEESRDIYGKSMRCRFPYDDKERIILEEGYPVYECNELCGCSRTCHNRVLQNGIRTKLEVFRTENKGWGIRACEHILRGTFVCEYIGEVLDQQEAKKRRTEYGEDGCSYIHDVDANINDIGRLIEGETDYVIDATTHGNVSRFINHSCSPNLVTYQVVVESMESSLAHIGLYASTDIAAGDEITRDYGRRPVTSGQESGHPCHCRATNCRGCFF