Gene Details:
- Gene ID: A03p059650.1_BraROA
- Suggest Gene Name: AGAMOUS-LIKE 24;SHORT VEGETATIVE PHASE
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain.
Homologous
- Arabidopsis thaliana — AT4G24540
- Glycine max — Glyma.01G023500
Sequences:
gDNA Sequence
- >A03p059650.1_BraROA
TATTCCCAAGATGGAAGCCTAACCCAAAGAAAAAGATCCACAAAATGAGTAACATACAAAACTTAAAAATGTATTTACAATAATGGAATCAGTTTTACCCAAGTTTAAGAGAAGTGTCGGAGAAGTCATCTTCAAGGGGAGCTCCACTGTCATAGCTTGACACATTCGTGGTCGCCGACTCTGTCTCCACAGCCTCCTTTAACGCCATCGTTTTAGCCATTTCCATCGTCACTACCTAATATTATATCAAAATCAAGATTTACCTTATTAGTATTACTTATAAAAATATTGAATGATCTCTACAATAGGTATAGAGCCATACTCTCTCCCTCAGTCTCCTATTCTCATCCACCAATTCCGATCCCTGCGAGTATTTACTCCAGTTATATTAATATGTGGTATACTTAATATATATAGGCTTGGTTAATCATCATATCATTTGATAATATGAATTGTACGTACTAACCCGTTTCTCAAGTGAAGAAATCTGGCTCATCAAAAACTCTCCCTAGTTAACAACAACAAACAATGTCACCTTTTTATATATGTGCTACATTAAGAAAACATGTATGCTATTAGTCTATATCTAGTAATGAACCTTTTTCTCAGACACACGGCTGAGTCCGGATTCGAGCATTTTCTCCAACCGCTGCAACTCTTCTAGGTTCAATCCTTCAAGATCCTCTCCTCTCAGTTTTCTGTTTTACGTTAGAATACAACATATCTAGTAATCATTTGTCTTTATAAATTCAGTTTCAGGAGACGACTTAGACCCCACATCGCACACAATATGCATACGCTAATAATAATGTGGATTCTTAAAAAGAACCACCCATCGTCGGATAAGAAGATAACAAACTAATGTCTTATAATATCGAAGAACGCCTAAACTATTACCGTAGCTTTTGTGATGATCTCGATCCAAAGATCTTTGTAGAGTTGGTTGGACTCATTCAAAAAATTACCCAACCAGATATCGGCTCGATAATGTCTATCAAACAAAAGTTCTATCCACCTATACTAGAAGTTGTTAGCTACAAATATTTTCATAAATATGAGAATAATGAGTCATATTTGCAAGCTATTAAACTTTTCTGAACTCAAGAAATCATTCTTAAAATCTATTTATAAAAACTTCGACGAATCTACTGCTACACATGGAATGAAATGACTTCGTTTTTAGATGAAATAGATGCTAAAACCTATATGTAACATAAAAATCATTCTCAAACATAAAAACCACACGTGCAAAGTCGCAAACATATATATGATGCCATACCTTAGCTGCTTGGTTTTGTCTTCGACTTCCTGACTTAGTCGGGAGAGGTTACAATTCTCAACCTGCTAGATGCAAAATCAACATTTTTAGGTTCTGTTACTGATATGTGAAACCAAGTAATTAAATGCTTCGAGATTAATGATAACAATTATGATATGCCATTCTATACCGCTAAATCTGGACTTACACCAAACAATTCAAAGAAACCCGCATAACAAGTGAATACTGGAGAAAGAGAGAATGATTTGATGAAAGAAAAAGAGTGAATGATAGTGAGAATACCTGGTGATATGGAGAAGGCTGGCCCATCACTTTGTTGATGTTACTTGCATGAAGATTATACCTTCCCAATATATCTCTCATCCTACACGTTTCAACAAACAATCCATCTTTCATATTAACATTTACATTGTCCAAATATGCAATTTGCGAAATTAGTTAATTAAAGAATACACTAGAAGCATGTCTCTAGTCCCCATAAAGAAAAGGAAATCAAAAGTAGACATCACGTCATAACATGTGCAGAAGATATTTATTAGATGACTACATTCTCAGAGATGTATTTTTTTTTTTTTTTGAACGACGAATATTTTAATAAAAAGCTGAAACAGAGTTCAAGTCCGTGGGCTAAAGTTACATTCTCAGAGATGTATATATGCTTCTGCTTCTCACAAAAAAATAAACGAGCGGTTAAGACTCAATCCCCAATCATACCAAGTGGACATTGTTAAAAGACTTTTGTAATACATAAAATAATGAGAAAAATCCATTCTAATTGTGGTAAGTACCATGTATCCATATATGCACATGCTTGCATAGGTTAGCACAATCACACTATCATATTCTACTTTCCCCTTCCTGATTATACAAAGTTAGCCATAAGTCTAAATGAAAAAAACTAATAAAACGTAAATAACACATACTTATAATTCATAATTTGTATATTTTTATTAGGAAAAAGGGATGAGAGCAAGTACAATAAGAGTACAATAATTTAAGTTGTCAGAATCTTTATTTTTCTTACTTCAGTATATCATCTAATTATGCGGTGACACGAGTTGATTACGTACATGATATCTCCAAGCCCGAGAATAATTTAATTTATAAAGTAAAAAATAACCAAATATCTGATATAATTACGTATCTTAACATAATAGCATCCCTCCAACCATTTTGATCTCTATAACACAAAAAAAAATTGAAAAAATAAAATAAGAGAAGAAGATCTATAACATGAAAGTAGAGATACCTTGAGCTAGAGAACTCAAAGAGCTTGCCGGTGGCAGAGAAGATGATAAGAGCAACATCGGCATCACAAAGAACCGAAAGTTCATCAGCTTTCTTGAAGATTCCTCTTCTTCTCTTAGAGAAGGTAACTTGTCTCGCTGTTATGTTATCTATCTTCTTTATCCTTCTCTTTTCTCTCGCCAT
CDS Sequence
- >A03p059650.1_BraROA
ATGGCGAGAGAAAAGAGAAGGATAAAGAAGATAGATAACATAACAGCGAGACAAGTTACCTTCTCTAAGAGAAGAAGAGGAATCTTCAAGAAAGCTGATGAACTTTCGGTTCTTTGTGATGCCGATGTTGCTCTTATCATCTTCTCTGCCACCGGCAAGCTCTTTGAGTTCTCTAGCTCAAGGATGAGAGATATATTGGGAAGGTATAATCTTCATGCAAGTAACATCAACAAAGTGATGGGCCAGCCTTCTCCATATCACCAGGTTGAGAATTGTAACCTCTCCCGACTAAGTCAGGAAGTCGAAGACAAAACCAAGCAGCTAAGAAAACTGAGAGGAGAGGATCTTGAAGGATTGAACCTAGAAGAGTTGCAGCGGTTGGAGAAAATGCTCGAATCCGGACTCAGCCGTGTGTCTGAGAAAAAGGGAGAGTTTTTGATGAGCCAGATTTCTTCACTTGAGAAACGGGGATCGGAATTGGTGGATGAGAATAGGAGACTGAGGGAGAGAGTAGTGACGATGGAAATGGCTAAAACGATGGCGTTAAAGGAGGCTGTGGAGACAGAGTCGGCGACCACGAATGTGTCAAGCTATGACAGTGGAGCTCCCCTTGAAGATGACTTCTCCGACACTTCTCTTAAACTTGGGCTTCCATCTTGGGAATAA
Protein Sequence
- >A03p059650.1_BraROA
MAREKRRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSRMRDILGRYNLHASNINKVMGQPSPYHQVENCNLSRLSQEVEDKTKQLRKLRGEDLEGLNLEELQRLEKMLESGLSRVSEKKGEFLMSQISSLEKRGSELVDENRRLRERVVTMEMAKTMALKEAVETESATTNVSSYDSGAPLEDDFSDTSLKLGLPSWE