Gene Details:
- Gene ID: A03p050350.1_BraROA
- Suggest Gene Name: TIMING OF CAB EXPRESSION 1
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.
Homologous
- Arabidopsis thaliana — AT5G61380
Sequences:
gDNA Sequence
- >A03p050350.1_BraROA
ATTTTTGTGGGTTTTGTGGGGTTTTGTCTGTAAATCTGATCATGGATTTGAACGGAGAGTGTAAGGGAGGAGGAGGAGGAGATGGGTTTATTGACAGAAGCAGAGTTAGGATTTTGCTTTGTGACAATGATCCCAATAGCTTGGGAGAGGTTTTCACCCTCCTTTCACAGTGTTCTTATCAAGGTATATTTTATATTCAGTTTGATGATGGATTTGAGTTTTTTTTTTACTCTTTGTACAATGAGTATTGTGGATGGCTGTTTTTGTAGTGACGTCAGTCAAATCAGCAAGGCAGGTGATTGATGCACTGAATGCAGAGGGGCCTGACATCGATATAATACTGGCGGAGATTGATCTCCCAATGGCCAAGGGTATGAAGATGCTGAGGTACATCACACGTGACAAAGATCTTCGGAGAATCCCTGTCATCAGTAAGTTCCATTTTCTTTTTAAGTATTCATTTACTTTCTCTACTTAGCAAAGTTTTTTTTTAAATGCATGAGGGTTTGCTGTATGATAACTAATCTTATGATATTTTTCAATTTAAGTGATGTCGAGGCAAGACGAGGTCCCTGTGGTGGTAAAGTGCTTGAAGCTAGGTGCAGCTGACTACCTTGTGAAGCCTCTTCGGACCAACGAGCTTCTCAACTTGTGGACACACATGTGGAGAAGAAGACGCATGGTTTGTTTTTTTTCTATCTTTAGTTCTCTCTATGCGGTTAACTGTCATATTCCTTGTTATATGATTGAGCGTGTGTGTGTGTGTGTTTGTTTTGGCAGCTAGGACTTGCTGAGAAGAACATGTTGAGCTATGAGTTCGATCTCGTGGGATCTGACCCAAGTGATCCAAATACAAACAGCACCAACCTCTTCTCTGATGACACAGATGAGAGAAGTATTAGGTCCACCAATCCGCAGAGAGGAAGTCATCAGGAAAAGGAGGTGAGATAGTATTATGAAAGTCTACAAGTCCTTTCAAAATAGGCAAATTAGCTAATTTTTCTTAGTTTGCGCTCAATGCTTTTGCTGGCAGTGGCCTGTTCCTACTGGTTCCGTTTGTGCTGGCGATGGTGCTGCTGATGGCACAGCCACGTCAACTCCTCCCGTTGCTATCATAGAGCCTCCTTTGAATCATCTTCCTGAACCTCACCATGAGCCTACCAAAAGAAATACTAATCCAGGTGAGATTGCATTGCTTTGATGTAGCACTTTCTAATAACGAGTCTAGCTTCTAATATAGCTACGGTTTTTGTAGCGCAATTTTCTTCAGTACCAAAGAAGAGTAGATTGAAGATTGGAGAGTCCTCCGCTTTCTTCACATATGTCAAGTCTACTGTCAATGGAAATGGCTCAGTTCATCCAGGTATGGCTGAGAAGCTTCAAGCGGTGGCAAGTGAGGTGATCAACAACGCCAAACAAACACGAGGAGGTAGAGAGACTGAGAAAAACAAAGCTCAAGGAGAGAACTTTGTGAACGGCACGCTTGAGCGGTCACGCACGCTTCCAACACCAATGGAACTTCATGGCAGTAGGAGTTACCAAGAAGTTCCAAATTCTATTGAGCGGTCACGCACGCTTCCACCACCAATGGAACTTCACGGTACTAGGAGTTGTTACCAAGAAGGATCTATGGATGATGCCCGGGTTGCTGCTGCTAAGGATTCATCTCAGTTCCCTGCGCAAAATGCATATCCTTACTATATGCATGGTGTCATGAACCAAGTTATGATGCAATCAGCAGCCATGATGCCTCAGTATGGTCATCATCAACATCCTCATTGCCCACCTAATCATCTGAATGGCATGACAGGGTTCCCTTATTACCACCACCACCACCAGATGAACACATCGTTACAGAACGGTCATGTGCCTTTACAGAATGGTCAGATGCCTCCTATGGTTCATCATCATCATTCTTGGCCACAGGTGGGAAACCACCCGTCTCCTAACGAGGTGAGAGTGACTAAGCTTGACAGAAGAGAGGAAGCGTTGCTTAAATTTAGACGTAAGAGGAACCAAAGGTGTTTTGATAAGAAGATTAGGTATGTGAATAGGAAGAAGCTTGCTGAGAGGAGGCCACGTGTTAAGGGTCAGTTTGTGAGGAAAATGAACGGGGTAAATGTTGACTTGAACGGGCAGCCTGAACCCGACTCTGCTGACTATGATGACGAGGAAGAGGAGGATGAAGAAGAAGAGGAGAATAGGGACTCGTCTCCTCAGGATGATGCTCTTGGAACTTGA
CDS Sequence
- >A03p050350.1_BraROA
TATTTTTGTGGGTTTTGTGGGGTTTTGTCTGTAAATCTGATCATGGATTTGAACGGAGAGTGTAAGGGAGGAGGAGGAGGAGATGGGTTTATTGACAGAAGCAGAGTTAGGATTTTGCTTTGTGACAATGATCCCAATAGCTTGGGAGAGGTTTTCACCCTCCTTTCACAGTGTTCTTATCAAGTGACGTCAGTCAAATCAGCAAGGCAGGTGATTGATGCACTGAATGCAGAGGGGCCTGACATCGATATAATACTGGCGGAGATTGATCTCCCAATGGCCAAGGGTATGAAGATGCTGAGGTACATCACACGTGACAAAGATCTTCGGAGAATCCCTGTCATCATGATGTCGAGGCAAGACGAGGTCCCTGTGGTGGTAAAGTGCTTGAAGCTAGGTGCAGCTGACTACCTTGTGAAGCCTCTTCGGACCAACGAGCTTCTCAACTTGTGGACACACATGTGGAGAAGAAGACGCATGCTAGGACTTGCTGAGAAGAACATGTTGAGCTATGAGTTCGATCTCGTGGGATCTGACCCAAGTGATCCAAATACAAACAGCACCAACCTCTTCTCTGATGACACAGATGAGAGAAGTATTAGGTCCACCAATCCGCAGAGAGGAAGTCATCAGGAAAAGGAGTGGCCTGTTCCTACTGGTTCCGTTTGTGCTGGCGATGGTGCTGCTGATGGCACAGCCACGTCAACTCCTCCCGTTGCTATCATAGAGCCTCCTTTGAATCATCTTCCTGAACCTCACCATGAGCCTACCAAAAGAAATACTAATCCAGTACCAAAGAAGAGTAGATTGAAGATTGGAGAGTCCTCCGCTTTCTTCACATATGTCAAGTCTACTGTCAATGGAAATGGCTCAGTTCATCCAGGTATGGCTGAGAAGCTTCAAGCGGTGGCAAGTGAGGTGATCAACAACGCCAAACAAACACGAGGAGGTAGAGAGACTGAGAAAAACAAAGCTCAAGGAGAGAACTTTGTGAACGGCACGCTTGAGCGGTCACGCACGCTTCCAACACCAATGGAACTTCATGGCAGTAGGAGTTACCAAGAAGTTCCAAATTCTATTGAGCGGTCACGCACGCTTCCACCACCAATGGAACTTCACGGTACTAGGAGTTGTTACCAAGAAGGATCTATGGATGATGCCCGGGTTGCTGCTGCTAAGGATTCATCTCAGTTCCCTGCGCAAAATGCATATCCTTACTATATGCATGGTGTCATGAACCAAGTTATGATGCAATCAGCAGCCATGATGCCTCAGTATGGTCATCATCAACATCCTCATTGCCCACCTAATCATCTGAATGGCATGACAGGGTTCCCTTATTACCACCACCACCACCAGATGAACACATCGTTACAGAACGGTCATGTGCCTTTACAGAATGGTCAGATGCCTCCTATGGTTCATCATCATCATTCTTGGCCACAGGTGGGAAACCACCCGTCTCCTAACGAGGTGAGAGTGACTAAGCTTGACAGAAGAGAGGAAGCGTTGCTTAAATTTAGACGTAAGAGGAACCAAAGGTGTTTTGATAAGAAGATTAGGTATGTGAATAGGAAGAAGCTTGCTGAGAGGAGGCCACGTGTTAAGGGTCAGTTTGTGAGGAAAATGAACGGGGTAAATGTTGACTTGAACGGGCAGCCTGAACCCGACTCTGCTGACTATGATGACGAGGAAGAGGAGGATGAAGAAGAAGAGGAGAATAGGGACTCGTCTCCTCAGGATGATGCTCTTGGAACTTGA
Protein Sequence
- >A03p050350.1_BraROA
YFCGFCGVLSVNLIMDLNGECKGGGGGDGFIDRSRVRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYEFDLVGSDPSDPNTNSTNLFSDDTDERSIRSTNPQRGSHQEKEWPVPTGSVCAGDGAADGTATSTPPVAIIEPPLNHLPEPHHEPTKRNTNPVPKKSRLKIGESSAFFTYVKSTVNGNGSVHPGMAEKLQAVASEVINNAKQTRGGRETEKNKAQGENFVNGTLERSRTLPTPMELHGSRSYQEVPNSIERSRTLPPPMELHGTRSCYQEGSMDDARVAAAKDSSQFPAQNAYPYYMHGVMNQVMMQSAAMMPQYGHHQHPHCPPNHLNGMTGFPYYHHHHQMNTSLQNGHVPLQNGQMPPMVHHHHSWPQVGNHPSPNEVRVTKLDRREEALLKFRRKRNQRCFDKKIRYVNRKKLAERRPRVKGQFVRKMNGVNVDLNGQPEPDSADYDDEEEEDEEEEENRDSSPQDDALGT