Information report for A03p038610.1_BraROA
Gene Details
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Functional Annotation
- Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis.
Homologous
- Brassica napus: BnaA03G0318500ZS, BnaC03G0381800ZS
- Brassica oleracea: Bo3g062600
- Brassica rapa: Bra001357
- Gossypium hirsutum: Gohir.D06G175700, Gohir.A05G293100, Gohir.A06G168200
- Juglans regia: Jr07_34250, Jr07_34260, Jr07_34270, Jr12_21780, Jr07_34280
- Populus trichocarpa: POPTR_008G035200v3
- Prunus avium: Pav_sc0001183.1_g600.1.mk
- Prunus persica: PRUPE_2G208600
Sequences
gDNA Sequence
- >A03p038610.1_BraROA
TGAATCCACCGGATAACAACCAAGACAATGCTCCATCTACACCCCACTCTCAGCTCCCCACTCCTCCTCCACAATCAAACTCAAATCCCAACCCAGACCCAACCTCAATCTCAATCTCCAACCCTAGCTTCGAGCAAATGGTCTCCTTCTCCGCTCCCAAGAAGCGAAGAAGAGGCCGATCTCAGCGCTCAACGTCGTCGTTTCACACTCTCCCCAACCCCGGAGGAATCCTCTCCAACATAGACGCCGCCCCGAGATCAACAAACCCTGGGATAGGCGACGAGATCATCACGATCAACAAGGACGCCACCACGGAGGCTCTCCTCGCCCTCACGGCCGGCTTCCCAGCCGATTCCCTCACCGAGGAGGAGATCGACTTCGGCGTGGTCCCCGTCGTCGGAGGAATCGAACAAGTCAACTACATTTTAATCAGAAACCACATCATATCCAAATGGAGAGAGAATATCTCCAGCTGGATCGCGAAGGAATCTTTTCTAGATTCGATTCCTAAGCATTGCATAAGTCTGTTAGACTCTGCTTACGACTATTTGGTTCTACACGGTTACATCAACTTCGGGATATCCCAAGCGGTTAAAGACAAGGTTCCTCCTACTCAGCAGCAGCAAAGCAAGCCTAGTGTGGTTATAGTGGGAGCTGGTTTGTCCGGTTTAGCCGCGGCGAGGCAGTTACTGAGGTTCGGGTTTAAAGTAACCGTTTTGGAAGGGAGGAAGCGGCCTGGCGGGAGGGTTTATACTAAGAGGATGGAAGGGAATAGAGTGGAGGCGGCGGCGGATTTGGGAGGGAGTGTTTTGACCGGGACGTTAGGGAATCCGTTAGGGATTATAGCGAGGCAGTTAGGTTGTTCTCTTTATAAAGTAAGAGATAAATGTCCTCTTTATCGAGTTGACGGTAAACCGGTTGATCCGGATTTGGATATGAAGGTGGAGGGGGCTTTTAACCGGCTTTTGGATAAGGCTAGTAAGCTTAGGCAGCTGATGGGTGATGTTTCGATGGATGTGTCACTCGGTGCGGCGCTGGAGACGTTCAGGCAGGTTTATGGGGATGCTACTGAGGAGATGAGTTTGTTTAATTGGCATCTTGCTAACTTGGAGTATGCGAATGCGGGTTTGGTGTCTAAGCTCTCTCTTGCGTTCTGGGATCAAGATGATCCTTACGATATGGGTGGGGATCATTGCTTTTTGCCTGGAGGGAATGGGAGGCTGGTTCATGCTTTGTCGGAGAATGTACCGATCTTGTATGAGAAGACTGTTCAGACGATCAGATACGGTGCGGATGGTGTGAAGGTAACCGCTGGACATCAAGTGTATGAAGGTGATATGGTGCTGTGTACAGTTCCCCTTGGTGTTCTGAAGAACGGATCCATCAAATTTGTGCCGGAGTTGCCTCAGAGGAAGCTTGATTGTATAAAGAGACTAGGTTTTGGGTTGTTGAATAAAGTTGCGATGCTGTTTCCGTTTGTGTTTTGGGGCACGGATCTTGATACCTTTGGACATCTTACGGAGGATCCAGCCAATAGAGGTGAGTTCTTCCTCTTCTATAGCTATGCGCAAGTTGCAGGTGGTCCTCTACTGATCGCGTTGGTTGCGGGAGAAGCTGCTCATAAGTTTGAGACTATGCCGCCCACTGATGCAGTGACTCGTGTTCTTCAGATACTTAGGGGTAATAAGATTTGCTATACTCGTATATAGTCATTCTAATTAATTCAAGGTTGGTGCTAATGTATGCCACACTTTACATCCTGATCCATTTCAGGTATGTATGAACCACAAGGAATAAATGTTCCTGATCCAATTCAAACGGTCTGCACCAGATGGGGAGGGGATCCATTCAGTTTCGGATCTTACTCCAACGTTGCAGTGGGAGCTTCAGGTGATGATTACGACATATTAGCAGAAAGTGTTGGAGACGGGAGGCTTTTCTTTGCTGGTGAAGCTACAACAAGGAGGTATCCTGCAACCATGCATGGAGCTTTCGTCACTGGTCTGAGAGAAGCTGCGAACATGGCTCAATCCGCAAAGTCCCGGGGCATAAGGAAGAGAATCGATAGGAACCCTTCAAAGAACCCTCACGCTTGCGCCACCCTTCTTGCAGATTTGTTCAGGGACCCTGATCTGGAGTTTGGGAGTTTCTCCATAATCTTTAGCCGGAGGAATCCAGACCCGAAGTCTCCTGCGATTTTGAGGGTAACGCTGAGCGAGCCTTGTAAGAGGAACGACGACCCAGTAGCGGATCAGTACTCGAACAAGATACTGTTTCAGCAGCTTCAGTCTCATTTCAATCAACAGCAACAGATTCAGGTGTATACTTTATTGACTAGACAACAGGCTCTTGACTTGAGAGAAGTCAGAGGTGGTGATGAAAAGAGGCTTTACTATCTATGCGAGACACTTGGAGTGAAGCTTGTGGGAAGAAAAGGTCTAGGAATCGGAGCTGATTCTGTCATTGCTTCTATTAAAGCTGAGCGAACCGGTCGCAAGCCAGCATTGTCATCTTCAGGCACAAAATCTGGTTAGGCTTCTTGATTTGATTGCTCTCCTCACTTATTGTATAGAACCAGTACTGACATGTTTTCCTTTCTCTCTATTGAGAAGGTATGTTAAAGGTTAAATCGGGTGCATTGAAGCGGAAGCTGATCAGGTAAACTACAAGCGATCTTATGTGCAATAATCTCTCGCATTTTTCAAATAGCCATTGCTTAGATATTTTTTTTGTTGCACAAGAAGGATTAAAGGACCGGTGCCACTGAATCAAAACAACAATGGTGACTCGGAGACTGTGAAACATGAGTCGTTAGGTAATGGCAAAGCCTCTGTGCAAGCGACAATAGCAGATACTATACGAAGCAGTAGCACGCAAGAGGAAAATAAATGGTTGGGCACAGGAGTTGCGTCAAGTTCTGGTATTCATTCTTCTTAA
CDS Sequence
- >A03p038610.1_BraROA
ATGAATCCACCGGATAACAACCAAGACAATGCTCCATCTACACCCCACTCTCAGCTCCCCACTCCTCCTCCACAATCAAACTCAAATCCCAACCCAGACCCAACCTCAATCTCAATCTCCAACCCTAGCTTCGAGCAAATGGTCTCCTTCTCCGCTCCCAAGAAGCGAAGAAGAGGCCGATCTCAGCGCTCAACGTCGTCGTTTCACACTCTCCCCAACCCCGGAGGAATCCTCTCCAACATAGACGCCGCCCCGAGATCAACAAACCCTGGGATAGGCGACGAGATCATCACGATCAACAAGGACGCCACCACGGAGGCTCTCCTCGCCCTCACGGCCGGCTTCCCAGCCGATTCCCTCACCGAGGAGGAGATCGACTTCGGCGTGGTCCCCGTCGTCGGAGGAATCGAACAAGTCAACTACATTTTAATCAGAAACCACATCATATCCAAATGGAGAGAGAATATCTCCAGCTGGATCGCGAAGGAATCTTTTCTAGATTCGATTCCTAAGCATTGCATAAGTCTGTTAGACTCTGCTTACGACTATTTGGTTCTACACGGTTACATCAACTTCGGGATATCCCAAGCGGTTAAAGACAAGGTTCCTCCTACTCAGCAGCAGCAAAGCAAGCCTAGTGTGGTTATAGTGGGAGCTGGTTTGTCCGGTTTAGCCGCGGCGAGGCAGTTACTGAGGTTCGGGTTTAAAGTAACCGTTTTGGAAGGGAGGAAGCGGCCTGGCGGGAGGGTTTATACTAAGAGGATGGAAGGGAATAGAGTGGAGGCGGCGGCGGATTTGGGAGGGAGTGTTTTGACCGGGACGTTAGGGAATCCGTTAGGGATTATAGCGAGGCAGTTAGGTTGTTCTCTTTATAAAGTAAGAGATAAATGTCCTCTTTATCGAGTTGACGGTAAACCGGTTGATCCGGATTTGGATATGAAGGTGGAGGGGGCTTTTAACCGGCTTTTGGATAAGGCTAGTAAGCTTAGGCAGCTGATGGGTGATGTTTCGATGGATGTGTCACTCGGTGCGGCGCTGGAGACGTTCAGGCAGGTTTATGGGGATGCTACTGAGGAGATGAGTTTGTTTAATTGGCATCTTGCTAACTTGGAGTATGCGAATGCGGGTTTGGTGTCTAAGCTCTCTCTTGCGTTCTGGGATCAAGATGATCCTTACGATATGGGTGGGGATCATTGCTTTTTGCCTGGAGGGAATGGGAGGCTGGTTCATGCTTTGTCGGAGAATGTACCGATCTTGTATGAGAAGACTGTTCAGACGATCAGATACGGTGCGGATGGTGTGAAGGTAACCGCTGGACATCAAGTGTATGAAGGTGATATGGTGCTGTGTACAGTTCCCCTTGGTGTTCTGAAGAACGGATCCATCAAATTTGTGCCGGAGTTGCCTCAGAGGAAGCTTGATTGTATAAAGAGACTAGGTTTTGGGTTGTTGAATAAAGTTGCGATGCTGTTTCCGTTTGTGTTTTGGGGCACGGATCTTGATACCTTTGGACATCTTACGGAGGATCCAGCCAATAGAGGTGAGTTCTTCCTCTTCTATAGCTATGCGCAAGTTGCAGGTGGTCCTCTACTGATCGCGTTGGTTGCGGGAGAAGCTGCTCATAAGTTTGAGACTATGCCGCCCACTGATGCAGTGACTCGTGTTCTTCAGATACTTAGGGGTATGTATGAACCACAAGGAATAAATGTTCCTGATCCAATTCAAACGGTCTGCACCAGATGGGGAGGGGATCCATTCAGTTTCGGATCTTACTCCAACGTTGCAGTGGGAGCTTCAGGTGATGATTACGACATATTAGCAGAAAGTGTTGGAGACGGGAGGCTTTTCTTTGCTGGTGAAGCTACAACAAGGAGGTATCCTGCAACCATGCATGGAGCTTTCGTCACTGGTCTGAGAGAAGCTGCGAACATGGCTCAATCCGCAAAGTCCCGGGGCATAAGGAAGAGAATCGATAGGAACCCTTCAAAGAACCCTCACGCTTGCGCCACCCTTCTTGCAGATTTGTTCAGGGACCCTGATCTGGAGTTTGGGAGTTTCTCCATAATCTTTAGCCGGAGGAATCCAGACCCGAAGTCTCCTGCGATTTTGAGGGTAACGCTGAGCGAGCCTTGTAAGAGGAACGACGACCCAGTAGCGGATCAGTACTCGAACAAGATACTGTTTCAGCAGCTTCAGTCTCATTTCAATCAACAGCAACAGATTCAGGTGTATACTTTATTGACTAGACAACAGGCTCTTGACTTGAGAGAAGTCAGAGGTGGTGATGAAAAGAGGCTTTACTATCTATGCGAGACACTTGGAGTGAAGCTTGTGGGAAGAAAAGGTCTAGGAATCGGAGCTGATTCTGTCATTGCTTCTATTAAAGCTGAGCGAACCGGTCGCAAGCCAGCATTGTCATCTTCAGGCACAAAATCTGGTATGTTAAAGGTTAAATCGGGTGCATTGAAGCGGAAGCTGATCAGAAGGATTAAAGGACCGGTGCCACTGAATCAAAACAACAATGGTGACTCGGAGACTGTGAAACATGAGTCGTTAGGTAATGGCAAAGCCTCTGTGCAAGCGACAATAGCAGATACTATACGAAGCAGTAGCACGCAAGAGGAAAATAAATGGTTGGGCACAGGAGTTGCGTCAAGTTCTGGTATTCATTCTTCTTAA
Protein Sequence
- >A03p038610.1_BraROA
MNPPDNNQDNAPSTPHSQLPTPPPQSNSNPNPDPTSISISNPSFEQMVSFSAPKKRRRGRSQRSTSSFHTLPNPGGILSNIDAAPRSTNPGIGDEIITINKDATTEALLALTAGFPADSLTEEEIDFGVVPVVGGIEQVNYILIRNHIISKWRENISSWIAKESFLDSIPKHCISLLDSAYDYLVLHGYINFGISQAVKDKVPPTQQQQSKPSVVIVGAGLSGLAAARQLLRFGFKVTVLEGRKRPGGRVYTKRMEGNRVEAAADLGGSVLTGTLGNPLGIIARQLGCSLYKVRDKCPLYRVDGKPVDPDLDMKVEGAFNRLLDKASKLRQLMGDVSMDVSLGAALETFRQVYGDATEEMSLFNWHLANLEYANAGLVSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVHALSENVPILYEKTVQTIRYGADGVKVTAGHQVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKLDCIKRLGFGLLNKVAMLFPFVFWGTDLDTFGHLTEDPANRGEFFLFYSYAQVAGGPLLIALVAGEAAHKFETMPPTDAVTRVLQILRGMYEPQGINVPDPIQTVCTRWGGDPFSFGSYSNVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFVTGLREAANMAQSAKSRGIRKRIDRNPSKNPHACATLLADLFRDPDLEFGSFSIIFSRRNPDPKSPAILRVTLSEPCKRNDDPVADQYSNKILFQQLQSHFNQQQQIQVYTLLTRQQALDLREVRGGDEKRLYYLCETLGVKLVGRKGLGIGADSVIASIKAERTGRKPALSSSGTKSGMLKVKSGALKRKLIRRIKGPVPLNQNNNGDSETVKHESLGNGKASVQATIADTIRSSSTQEENKWLGTGVASSSGIHSS