Gene Details:
- Gene ID: A03p037530.1_BraROA
- Suggest Gene Name: CONSTANS-LIKE 9;Days to heading on chromosome 2
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
- Pfam: PF06203
Functional Descriptions:
- This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.;Encodes a CONSTANS‐like protein that probably acts independently of Hd1 and Ehd1; CONSTANS-Like 9
Homologous
- Arabidopsis thaliana — AT3G07650
- Oryza sativa — LOC_Os02g49230
Sequences:
gDNA Sequence
- >A03p037530.1_BraROA
TGGGTTACATGTGTGACTTCTGTGGTGACCAAAGATCAATGGTGTACTGCCGATCAGATTCAGCCTGTCTCTGTCTCTCCTGTGACCGGAGTGTTCATTCCGCTAACGCATTATCCAAACGACATTCTCGTACTCTTGTCTGCGAGAGATGCAATGCACAGCCTGCCACAGTTAGGTGTGTTGAAGAAAGAGTCTCACTCTGTCAAAACTGTGATTGGTCAGGCCACAACAACAACTCTACTTCTTCAAATGATCACAAGAGGCAAACCATAAGCTGCTACTCTGGTTGTCCTTCAAGCTCAGAGCTCGCCTCTATCTGGTCTTTTTGCTCGGAATTAGCAGGAGAATCCGCTTGTGAACAAGAGATGGGTATGATGAATATAGACGATGATGGTCAGACCAAAGAAAACTGTAATGAGGATAAGAAAGATGAAACCAGTTCTGCAGCACAAGCAACAAATGCATCATTTGCTAAGGTAACTTAATTTTCTTTCATCGTTAGCTCAACTAGAAAAGACCATGGCCATTGTGTCAGAGGTCCCCGGCTCAAATTACCTCTGAGAAAAAACTAATTAATATTACATGTTGTGGTTTCGGATCGGGGGATTACAAGCTTTGGCCCCCAACCTCATGATATTAAAAAAAAATACCCTCTAAAAAATTATCATGTTTCTTTTAACTAAAACCTCAAGTTCTTGTTATGGTTTGAAGGATGTTGGAGTGTGTGAAGATGACTTTTATGGGAACTTGGGTATGGATGAAGTTGACTTGGCTCTTGATAACTACGAAGAGCTCTTTGGAACAGCCTTTAACACCTCGGTACATCTCTTTGGACAAGGTGGAGTCGATAGTCTTTTCCAGAAACATCAACAAGCAGCTGCTCCTGAGGTATGTTTCCATGATTTATAAGCAAACAATTAAAGAAAGAGATTGCATCTTTGTGTGATTCTAATGATGATATTTGTTAATCCAGGGAGGGAATCTGGTGCAGCCAGCTGAGAGTAATGATGACTCGTTCATGAGTTCTAAAACGGAGCCAATCATTTGCTACACGTCGAAGCCAGCACATTCAAACATATCTTTCTCTGGAGTCACCGGAGAAAGCAGTGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCGTGCAGCTCACGGGTGAGCCACCATGGCATCCCCAAACATCACAGTCAGTAACCCGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTAAGTTAACCTTTATTCAATACATGCATCAGTGAAGTAAGTTGAGTGTTTTCTAAAATGAGAGATTGTGGTTTTTGTTTAGGTTTGATAAGAGAGTGAGGTATGCTTCTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTGTTAAAGCTGGTGAGGCTTATGACTACGACCCACTCACCCCAACCAGAAGCTATTAA
CDS Sequence
- >A03p037530.1_BraROA
ATGGGTTACATGTGTGACTTCTGTGGTGACCAAAGATCAATGGTGTACTGCCGATCAGATTCAGCCTGTCTCTGTCTCTCCTGTGACCGGAGTGTTCATTCCGCTAACGCATTATCCAAACGACATTCTCGTACTCTTGTCTGCGAGAGATGCAATGCACAGCCTGCCACAGTTAGGTGTGTTGAAGAAAGAGTCTCACTCTGTCAAAACTGTGATTGGTCAGGCCACAACAACAACTCTACTTCTTCAAATGATCACAAGAGGCAAACCATAAGCTGCTACTCTGGTTGTCCTTCAAGCTCAGAGCTCGCCTCTATCTGGTCTTTTTGCTCGGAATTAGCAGGAGAATCCGCTTGTGAACAAGAGATGGGTATGATGAATATAGACGATGATGGTCAGACCAAAGAAAACTGTAATGAGGATAAGAAAGATGAAACCAATGACTTTTATGGGAACTTGGGTATGGATGAAGTTGACTTGGCTCTTGATAACTACGAAGAGCTCTTTGGAACAGCCTTTAACACCTCGGTACATCTCTTTGGACAAGGTGGAGTCGATAGTCTTTTCCAGAAACATCAACAAGCAGCTGCTCCTGAGGGAGGGAATCTGGTGCAGCCAGCTGAGAGTAATGATGACTCGTTCATGAGTTCTAAAACGGAGCCAATCATTTGCTACACGTCGAAGCCAGCACATTCAAACATATCTTTCTCTGGAGTCACCGGAGAAAGCAGTGCTGGAGATTTTCAAGAATGTGGTGCATCATCTTCCGTGCAGCTCACGGGTGAGCCACCATGGCATCCCCAAACATCACAGTCAGTAACCCGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTTTGATAAGAGAGTGAGGTATGCTTCTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTGTTAAAGCTGGTGAGGCTTATGACTACGACCCACTCACCCCAACCAGAAGCTATTAA
Protein Sequence
- >A03p037530.1_BraROA
MGYMCDFCGDQRSMVYCRSDSACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNNSTSSNDHKRQTISCYSGCPSSSELASIWSFCSELAGESACEQEMGMMNIDDDGQTKENCNEDKKDETNDFYGNLGMDEVDLALDNYEELFGTAFNTSVHLFGQGGVDSLFQKHQQAAAPEGGNLVQPAESNDDSFMSSKTEPIICYTSKPAHSNISFSGVTGESSAGDFQECGASSSVQLTGEPPWHPQTSQSVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLTPTRSY