Gene Details:
- Gene ID: A03p035730.1_BraROA
- Suggest Gene Name: CLP-SIMILAR PROTEIN 3
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
Functional Descriptions:
- Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression.
Homologous
- Arabidopsis thaliana — AT3G04680
Sequences:
gDNA Sequence
- >A03p035730.1_BraROA
TAATGACTCTCAAGCCATGTCAAAGATCCAGCGACCAGGATCTTGCTAGGCAATGCCCCTGGCGATGGTGCTAAATACGTTATCTTCTTCCTCAGCACATCAACCTCTGTCACATACACAAACCCTGAAACATTGCTGCATACAAAGCACAAGAGAGAGAGAAACAAACATCAAAAACAGAAGCCTTTGACTTCAAACAGTAGGAACATTTTGAGGTTACCTTGAGACAATCTGGTCTGGTTCTTCTGCATATGAGACAGCGAGGATAGAATGCAGCAGATCCCTCTCTTCGATATTCACAGGCGTTACCCTCAGCGGATTAGAAACAGGATCAGACCCTATTGGAAGAGCTGATCTCGGAGCTTGCGGTCCACCACCAATGCGGAACACTTGCACATCACTGAAGCTAGATGTGTTGGCATAAGGAGAGAGCTCTTTAGATAGACCGTAGAAATACTCCTGAATCCTAGAGCTTCTCGCTACTTTACGGTAGTCACGGTTCCTAGCCACAACTCCACCTGACTTGTGAAGCTTCACCACGTCCACGTTGCTCTTACTCTTCAGGACATCTTTAAGCATGCTGAAGAGCTTTTCTTGACCCAATACAAGTACAACGGAGGCGTTGAATGTTTCTATTGCATGGAGAAGCAGCTGCAAAACAAACACACAGAGACAGTTATTTTTTTTAAACAAAAGCTTTCAGAAGTAAACAGAACCAACGTTTACCTCATAACCGATACCATCGATCCATCCCATTGTGTTGATCACCATTCCAGCAGCTCGAGACTCAGGGTTTCCAAGAAACTGTCTCTCCAGCACTTGTGCAAGCTCCTTCACCATTGTTTTGTACAGTTCAACGTTGTTACTGAGAGAATAACGATAGACAACATTAATAACATATGACTGGGGAAGAGACATTTGAAAATCACTTACGCTGGTGTAGTGTGACCGTAGTAGTAGACGAGAGCCATATCTAGAGGAAACCCTTCAACAGGATCAAGTGGCATCTCTATAGGTGTAGCAGCAATAGAACCAGGTATTGTAATGGAGCCTTGGCCAACATCAAGGTCTACAAACGTAGGCTTCCATCCCTGTTTGGCTGCCCAACTAATAAGCATCTTAGTCAAGGTGCTCTTTCCTGAATCCGTAGGCCCTACCACAATAACCCTAGGTCCCTGCACAAAGCAGATTCTATAAAAAAACAAATGATATAGAAGAACAAGATCATTGAAAGAGAAGGAGTACCGTACCTGAGGAGGTTCTGAGTCAGTAGATGTGGAAGCTTTAGCAAAACGTCTCCTTGCATCTAGTATTGCGTGTACATTAACGTAGCTGACCATTGGTGTCTACAAAAAAAGCTGAGAGCTTCTTAGTAATCAACCTTTTGCTCTGAAAGGAAGAGTGGAAGATGAAACAAGAACCCTTACCTCATCTGCTGTATAGTCTGTTTCAGTGACACCATCCATCTCAATCGTCGCTCCATACCAAGTGAAAACCTGACAAGAATCAAAAGAGCGAACTTCAACTTCTGAAGAAATAGTTACCAAAACCACATATCTCCTCATAATCTCTATAAGAACTAACTTAACCGTTCTTAACTGATTCGTCATGATACAACCTAAAGCTTAAGCCTTTCATCCCAAAAAAAAAAACACAAAGACCATAAAGTCTTCAACTTTACCCAACCCATGAAGGCCAGAGGAGTGAATTTGATAGAAACTCAAATTAGTAACCAGAAGGAAACAACACACAAGAGAGAAACTTGGCAGAACCACAAATCTACTCATAGATCACCAGACGAACTAACTTAACGGTTCTAAAAACTGATTCATCATGTTACTACCTAAAGCTTAAGTCTTTCATCTCAAACAAAACACAAACACCATAAAGTCTTAAACTTTACCCAACCAATGAAGGCAAGAGGATGAACTTGATAGCAACTCAAGAACACACTTGGAGATTATAAAACCATAACTAATATTATTACTACCTAAAGCTTAAGCCTTTCATCCCAAACAAAACACAAAGACCAAAAAGTATTAAACTTTACCCAAACCCATGAATGCCAAAGAGTGAACTTGATAGCAATTCAAGAACACACTTGGAGATATAGAACCACAACGTACCGCAAATTTGAGGCGAGGAGGGAAGGTGCGCCAGATCTCAGGAGGAAGCTCAGCGCCGAAGATCTCAGCAGTCCCGTTAACCACACGGAGTCTGAGAGGCTCGTCGGAGACTTCTATCCTGAGCTCGCTTTCTCTGTCCAGCTTCACCTGCTTCAGATTACTAGACCCACCAGGAATGGCACCACTCATAGCCGGTGGGTTCATCGACGGACCACCGTAAGCCAT
CDS Sequence
- >A03p035730.1_BraROA
ATGGCTTACGGTGGTCCGTCGATGAACCCACCGGCTATGAGTGGTGCCATTCCTGGTGGGTCTAGTAATCTGAAGCAGGTGAAGCTGGACAGAGAAAGCGAGCTCAGGATAGAAGTCTCCGACGAGCCTCTCAGACTCCGTGTGGTTAACGGGACTGCTGAGATCTTCGGCGCTGAGCTTCCTCCTGAGATCTGGCGCACCTTCCCTCCTCGCCTCAAATTTGCGGTTTTCACTTGGTATGGAGCGACGATTGAGATGGATGGTGTCACTGAAACAGACTATACAGCAGATGAGACACCAATGGTCAGCTACGTTAATGTACACGCAATACTAGATGCAAGGAGACGTTTTGCTAAAGCTTCCACATCTACTGACTCAGAACCTCCTCAGGGACCTAGGGTTATTGTGGTAGGGCCTACGGATTCAGGAAAGAGCACCTTGACTAAGATGCTTATTAGTTGGGCAGCCAAACAGGGATGGAAGCCTACGTTTGTAGACCTTGATGTTGGCCAAGGCTCCATTACAATACCTGGTTCTATTGCTGCTACACCTATAGAGATGCCACTTGATCCTGTTGAAGGGTTTCCTCTAGATATGGCTCTCGTCTACTACTACGGTCACACTACACCAGCTAACAACGTTGAACTGTACAAAACAATGGTGAAGGAGCTTGCACAAGTGCTGGAGAGACAGTTTCTTGGAAACCCTGAGTCTCGAGCTGCTGGAATGGTGATCAACACAATGGGATGGATCGATGGTATCGGTTATGAGCTGCTTCTCCATGCAATAGAAACATTCAACGCCTCCGTTGTACTTGTATTGGGTCAAGAAAAGCTCTTCAGCATGCTTAAAGATGTCCTGAAGAGTAAGAGCAACGTGGACGTGGTGAAGCTTCACAAGTCAGGTGGAGTTGTGGCTAGGAACCGTGACTACCGTAAAGTAGCGAGAAGCTCTAGGATTCAGGAGTATTTCTACGGTCTATCTAAAGAGCTCTCTCCTTATGCCAACACATCTAGCTTCAGTGATGTGCAAGTGTTCCGCATTGGTGGTGGACCGCAAGCTCCGAGATCAGCTCTTCCAATAGGGTCTGATCCTGTTTCTAATCCGCTGAGGGTAACGCCTGTGAATATCGAAGAGAGGGATCTGCTGCATTCTATCCTCGCTGTCTCATATGCAGAAGAACCAGACCAGATTGTCTCAAGCAATGTTTCAGGGTTTGTGTATGTGACAGAGGTTGATGTGCTGAGGAAGAAGATAACGTATTTAGCACCATCGCCAGGGGCATTGCCTAGCAAGATCCTGGTCGCTGGATCTTTGACATGGCTTGAGAGTCATTAG
Protein Sequence
- >A03p035730.1_BraROA
MAYGGPSMNPPAMSGAIPGGSSNLKQVKLDRESELRIEVSDEPLRLRVVNGTAEIFGAELPPEIWRTFPPRLKFAVFTWYGATIEMDGVTETDYTADETPMVSYVNVHAILDARRRFAKASTSTDSEPPQGPRVIVVGPTDSGKSTLTKMLISWAAKQGWKPTFVDLDVGQGSITIPGSIAATPIEMPLDPVEGFPLDMALVYYYGHTTPANNVELYKTMVKELAQVLERQFLGNPESRAAGMVINTMGWIDGIGYELLLHAIETFNASVVLVLGQEKLFSMLKDVLKSKSNVDVVKLHKSGGVVARNRDYRKVARSSRIQEYFYGLSKELSPYANTSSFSDVQVFRIGGGPQAPRSALPIGSDPVSNPLRVTPVNIEERDLLHSILAVSYAEEPDQIVSSNVSGFVYVTEVDVLRKKITYLAPSPGALPSKILVAGSLTWLESH