Information report for A03p024660.1_BraROA
Gene Details
|
|
Functional Annotation
- Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.
Homologous
- Brassica napus: GSBRNA2T00139104001, GSBRNA2T00075487001, BnaC03G0245900ZS, BnaA03G0208700ZS
- Brassica oleracea: XP_013622129.1, XP_013622128.1, Bo3g036300
- Brassica rapa: XP_009133563.1, XP_009133562.1, Bra000283
- Raphanus raphanistrum: RrC2388_p6
Gene Resources
- Pfam: PF00010
Sequences
gDNA Sequence
- >A03p024660.1_BraROA
TAAGGTACAGATCAGAAACCACCTCTAGAAATTTAGCAATAGATCTCATCCCTAAAGAAGAAGATCTCCACCGGTTGGTCCCATTGATTCCAACATAATGTCCCAGAACTTGCCACGTGGCGTTTGGTCTGAAAGGTTGCTGTACTGTTGTGCTTACAGAATCATTATCTCCCTTGCTGTAATATCTCTCCTCTTTATGCTTCTGTCACTTTCTGTCTGTACAAAAAGAAGTAAAGAACCTTACCCATCTCTCTCTCCTCTGTTTCTTTCATGTTTTATGATAGCTTCTTAAGAAACTTCTGGCCTATGGGTTTATGTAGAGACTAGAGAGCAAGTGAGAGGAAAGAGAAGGTTTTGTTCCTTTTGGGCGTGGAACTTTAACTTCCACAAGTCAGGTTTAGATCTTCTACTTCTTCAGCTTCTGATTCGTCCAGAAGCTTTCCAAATCTGGTCAGTATTCTTATACGGTCTTTTGGTTTTAAGAGATGTTACTATATTTGGAATAAAATTAATAAAATGAACTCATGTTCCTGCTTTTTAATTTAATTATTTATAACTCTTTTTATATGATTAGTGTAACAAAATTATTGGAGTTGGGATTATAAAATTGTACTTTATGCTCCTTTGTTTCTCTTCTTAATTAATCATAAGATATGATTAGCTCTGTTCACTTATAATACTTTATAATATTGGAGGTTGATAAATAAATTATTTCCATGTCTCCAGAGATCTGACATGGAACACCAAGGTTGGAGTTTTGAGGAGAATTACAATCTGTTCAATAATAGAAGATTTATAAGGTAATATAATGTTTAATCTAATTTATTCACTAATTAAAAAGGACTATACAATAGTCCCTGAGTGTGTACATGTGTAGGCCACAAGATGAACTAGTAGAGTTGTTATGGCGAGATGGGCAAGTGGTTCAGCAGAGCCAAACTCATAGAGATCAAACTCAAGCTCAAGTTCAAGCTCAGAAACAGGATCAAGAAACCCTAAGATCCTACACTTTTCTTGAAGACCAAGAAACCGTCTCTTGGATCCAATACCCTCTAGATGAAGATCCATTTGAATCCGAAGACTTCACCTCACCTTTCTTCTCAACTATAGATCCCGTCCAGAGACCGGCTTCAGAGACGGTTAAGCACGAGGCCGGTCCTGTCCCTCCTGATCAAGTCATGCCTCCTCCTAAGTTTAGGCTAACGGGTTCATCATCAGGAGTCAGGGAACTAGGAAAAGAACAGTACTCGGTGATGACCGTTGGACCGAGCCACTGCGGGAGCAACCAATCTCAAACCGATCTCGATGTCTCATTGACTCATGATCCAAGTAAACCAATCGATGAGAGGCTCTACTCGAACGAAAATTCATCATCAGGTGGCTCCTCTGGTTGCAGCCTTGGCAAGAACAACAAAGAAATAGCTTGTGGAAGAAGCATCACAGCAGACCGTAAGAGAAAACATATAATGGACACTGATGAATCTGTGTCTCAGTCAGATGTATGCTTTATTTTATAACTCATGATGATAAGTTCTTGAAACGTTTTCTTAGTCCATTTCTCATTGTTCTTGAAACGTTTTACAGGCTATCGGTAATAACAAGTCGAACCAACGATCAGGATCAACCCGAAGAAGTCGAGCAGCTGAAGTTCATAATCTTTCCGAAAGGGTATTTTTCTCAATTCGTCTAATTAATTTTTTTTCATCGTAAATGTATTTTTTGCTATTACCAAATTTAAACTAATAGCATTTCAATAAATTTCATTATTATTTATTATAAACTAAAACATCTATTTTATCGGAGGGTGTATAATGTATTCAGCCAAAGATAATATATACTAAACTCTGTTTCTTTTGTTAATTAAATTAGAGGAGGAGAGATAGGATCAATGAGAGAATGAAGGCTTTGCAAGAACTAATACCTAACTGCATAAAAGTAAGTTATAAACTTGAATCTGATATGGGGACTAATTGATTAAGTTAAAAAGAAATTGGTGTCACTCGGGTTTGTTTTTCTTGTAGACTGATAAAGCTTCAATTTTGGAAGAAGCCATAGATTATTTGAAGTCACTTCAGTTACAGCTTCAAGTTATGTGGATGGGGAGTGGAATGGCTGGTGCTGCAGCGACTCCTATTATGTTCCCTGGGGTACAGCCTCCTCCACCGTTCATCCGTCAGCTGCAAAGCCCGGTACTGTTGCCACGATTTCCGGTTATGGACGGGTCTGCTATTCAGAACAATCCTGGTTTAGTTTGTCAAAACCCGGTACAAAACCAAGTTTTCCCCGATCGGTTTGGTAGATATGTTGGCCTATTCCCACGTATGCAGGGCACGTCTCAGGTAAGGCTCCTCATATGTTACGTAGTTAAGTACATATAAGAGCCTAGTGAAATGCCACAAACGACGTAGTTTATTTGACATGTTGTGGTTTGATATTAAACGTAGCCGATGGAGATGATGACATTTGGTTCTCCGGCGGGACAGGAAAGTCAACGTACTTCTGCGCCGAAGACCACCGACGGACCTCGTTAG
CDS Sequence
- >A03p024660.1_BraROA
ATAAGGTACAGATCAGAAACCACCTCTAGAAATTTAGCAATAGATCTCATCCCTAAAGAAGAAGATCTCCACCGAATCATTATCTCCCTTGCTGTAATATCTCTCCTCTTTATGCTTCTGTCACTTTCTGTCTGTACAAAAAGAAAGACTAGAGAGCAAGTGAGAGGAAAGAGAAGGTTTTGTTCCTTTTGGGCGTGGAACTTTAACTTCCACAAGTCAGGTTTAGATCTTCTACTTCTTCAGCTTCTGATTCGTCCAGAAGCTTTCCAAATCTGGTTGATAAATAAATTATTTCCATGTCTCCAGAGATCTGACATGGAACACCAAGGTTGGAGTTTTGAGGAGAATTACAATCTGTTCAATAATAGAAGATTTATAAGGCCACAAGATGAACTAGTAGAGTTGTTATGGCGAGATGGGCAAGTGGTTCAGCAGAGCCAAACTCATAGAGATCAAACTCAAGCTCAAGTTCAAGCTCAGAAACAGGATCAAGAAACCCTAAGATCCTACACTTTTCTTGAAGACCAAGAAACCGTCTCTTGGATCCAATACCCTCTAGATGAAGATCCATTTGAATCCGAAGACTTCACCTCACCTTTCTTCTCAACTATAGATCCCGTCCAGAGACCGGCTTCAGAGACGGTTAAGCACGAGGCCGGTCCTGTCCCTCCTGATCAAGTCATGCCTCCTCCTAAGTTTAGGCTAACGGGTTCATCATCAGGAGTCAGGGAACTAGGAAAAGAACAGTACTCGGTGATGACCGTTGGACCGAGCCACTGCGGGAGCAACCAATCTCAAACCGATCTCGATGTCTCATTGACTCATGATCCAAGTAAACCAATCGATGAGAGGCTCTACTCGAACGAAAATTCATCATCAGGTGGCTCCTCTGGTTGCAGCCTTGGCAAGAACAACAAAGAAATAGCTTGTGGAAGAAGCATCACAGCAGACCGTAAGAGAAAACATATAATGGACACTGATGAATCTGTGTCTCAGTCAGATGCTATCGGTAATAACAAGTCGAACCAACGATCAGGATCAACCCGAAGAAGTCGAGCAGCTGAAGTTCATAATCTTTCCGAAAGGAGGAGGAGAGATAGGATCAATGAGAGAATGAAGGCTTTGCAAGAACTAATACCTAACTGCATAAAAACTGATAAAGCTTCAATTTTGGAAGAAGCCATAGATTATTTGAAGTCACTTCAGTTACAGCTTCAAGTTATGTGGATGGGGAGTGGAATGGCTGGTGCTGCAGCGACTCCTATTATGTTCCCTGGGGTACAGCCTCCTCCACCGTTCATCCGTCAGCTGCAAAGCCCGGTACTGTTGCCACGATTTCCGGTTATGGACGGGTCTGCTATTCAGAACAATCCTGGTTTAGTTTGTCAAAACCCGGTACAAAACCAAGTTTTCCCCGATCGGTTTGGTAGATATGTTGGCCTATTCCCACGTATGCAGGGCACGTCTCAGCCGATGGAGATGATGACATTTGGTTCTCCGGCGGGACAGGAAAGTCAACGTACTTCTGCGCCGAAGACCACCGACGGACCTCGTTAG
Protein Sequence
- >A03p024660.1_BraROA
IRYRSETTSRNLAIDLIPKEEDLHRIIISLAVISLLFMLLSLSVCTKRKTREQVRGKRRFCSFWAWNFNFHKSGLDLLLLQLLIRPEAFQIWLINKLFPCLQRSDMEHQGWSFEENYNLFNNRRFIRPQDELVELLWRDGQVVQQSQTHRDQTQAQVQAQKQDQETLRSYTFLEDQETVSWIQYPLDEDPFESEDFTSPFFSTIDPVQRPASETVKHEAGPVPPDQVMPPPKFRLTGSSSGVRELGKEQYSVMTVGPSHCGSNQSQTDLDVSLTHDPSKPIDERLYSNENSSSGGSSGCSLGKNNKEIACGRSITADRKRKHIMDTDESVSQSDAIGNNKSNQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPNCIKTDKASILEEAIDYLKSLQLQLQVMWMGSGMAGAAATPIMFPGVQPPPPFIRQLQSPVLLPRFPVMDGSAIQNNPGLVCQNPVQNQVFPDRFGRYVGLFPRMQGTSQPMEMMTFGSPAGQESQRTSAPKTTDGPR