Gene Details:
- Gene ID: A03p015720.1_BraROA
- Suggest Gene Name: CO-LIKE AND TOC1 MOTIF
- Description: putative flowering gene
- Species: Brassica rapa ro18
- Source: Putative flowering gene from PlantCFG
Protein Features:
- Pfam: PF06203
Functional Descriptions:
- Member of ASML2 family of CCT domain proteins.There is a preferential accumulation of RNA isoforms CCT101.1 and CCT101.2 in response to N-treatment, each isoform has different targets.
Homologous
- Arabidopsis thaliana — AT5G53420
- Oryza sativa — LOC_Os05g51690
Sequences:
gDNA Sequence
- >A03p015720.1_BraROA
TACTTCCTCTCCTCAGTTTTGGCAAACCTTCCTCGGATCCTTGGTTGGCTATCTGCAAGAGCTTTCCTACAAGCATACTGAAACCAAACAATACAACAGTTTGAGTTACTTCAAACTAAATAAAAAAAAAGATTAGTTCTCAAGAGGATCTTCAAGTGTTTGAATTACCTTGATTTTGCGTCCGAAGTTTCGCCTGCTCTTCTTGTTCCTGTATCGAGACAGCTTCTCACGTCGATCATCTGAAGTACAGCTCACAATAATCATATCCAGTGGACATTGAAAATGACCAGTCCCAAGTTTCTACTCATCAAAAAAAAAAAACAACAATAAAATATTATAATCAACAATTCATATTATTCATATAAGAATGTCTAAAAAGGACACAAACTTTGTGCAATGGTTCAAACCTGTATGTCGCCTTCACTAAAGGCTCGTCGCATCCCATTAACATAACCAAAATCCAACTGAGAATAATCAGGGAAGTTCTGAACCACAAGAGCTTCTTGATTCTGTGACCAACCCATAGAGCTCAAATTCTCCGAGCTAACACTCTTCTGCAAATCCTGGCTCTCATTGGTGATCAGAGAGATGTTCTTGACGTCTAAGACATCAGAGAATGGAGGCTCCATAGCTGACTTCATTATGAGATCTTGCTCACACTCATAAAAGGCTTTGTCAAGAAGCTCTTGGCCACTCTGCAGTGACCCTAGATCAGGAAGCTCGCAAAGCCCTTGCGAAGAGTCTTCACCGCAAGAGATCATTGTCAAAGCAGCTGAGAGTGGATCAACGGCTACAATAGGATCTTCAAGAATTGGATCAGGAGCTTTGAATAAATCTCCTTCTTCTCCAAGATCATAGTCAGTTATGTTTGTTGACTTAGCAAAAGCGTTGTTCTTGTAAAAAATAAATCACAATCAAAAGTAGCAGCATCAGAATCAAAGACCACAACACAACACAAAACAAAACAGAACATAGTTCGAGACATTAAGACAGTAAAGCACGGATCTTTATGGGAAGTGGATCCCTTTTTTTTTTTAATTTAGTGGAGGAAGAACCAATGAAACAACACAAACCCTTTTCTAGTCTTGAGGGACACGGAATCTCATGTAAAAAAAAAGGGCACAGTTCCCATTATCAAATCTCTAGACTCATTAAGGGTTTCTTTAGTTTCCCGAGAAAACTTCTTTTTTTTTTCTCTCACGGGAAAATAAAAAGTTGGCTTTTTGCTGCAAAAGAAGATTCCGTTTTATAAAAAGATTCCATTTTTCTTCAGACAAAAGAAAAAAAAAACATTTTTTTTTCTACTCAAACTTTCTTAGCAGCTAAAAGCAATTATGGACAGGTCAGCGGAACACAAATATCTTATTATCAAGTGACCACTTAAGAGTTTACACCACAAACGTTTCCTCTTGAAAAATCAACTTCACTAGTAGACAAATTTGCTTTGTTCAGCTCCTAGACACTCCAATTTTAACTCCATAAACCAAAACAAAAAGAGGAAGAAATATGTTTCATTACATCAAAAAGACAAACACAACAAAAAACACTATCAGAATCTTCTGGGAGAAACCCAAAAACCTAAAATCAGTTTGAAAATCAACAAAAAAAAAAAAGAGAACGAAAAAATCATCACAAAAAAGGAGATCTATATTCAAATGCAGTGAATTAGAAAATGAAAATCCATACCATTTCATCATCAGAGAGCTTGTATGATTTGAAGAGGTCTTCAATTTGTTGAAAATCTGGTGGACAATTATGCATGTAACTGATCATTAACCCAGAATCTGCATACAT
CDS Sequence
- >A03p015720.1_BraROA
ATGTATGCAGATTCTGGGTTAATGATCAGTTACATGCATAATTGTCCACCAGATTTTCAACAAATTGAAGACCTCTTCAAATCATACAAGCTCTCTGATGATGAAATGAACAACGCTTTTGCTAAGTCAACAAACATAACTGACTATGATCTTGGAGAAGAAGGAGATTTATTCAAAGCTCCTGATCCAATTCTTGAAGATCCTATTGTAGCCGTTGATCCACTCTCAGCTGCTTTGACAATGATCTCTTGCGGTGAAGACTCTTCGCAAGGGCTTTGCGAGCTTCCTGATCTAGGGTCACTGCAGAGTGGCCAAGAGCTTCTTGACAAAGCCTTTTATGAGTGTGAGCAAGATCTCATAATGAAGTCAGCTATGGAGCCTCCATTCTCTGATGTCTTAGACGTCAAGAACATCTCTCTGATCACCAATGAGAGCCAGGATTTGCAGAAGAGTGTTAGCTCGGAGAATTTGAGCTCTATGGGTTGGTCACAGAATCAAGAAGCTCTTGTGGTTCAGAACTTCCCTGATTATTCTCAGTTGGATTTTGGTTATGTTAATGGGATGCGACGAGCCTTTAGTGAAGGCGACATACAGAAACTTGGGACTGGTCATTTTCAATGTCCACTGGATATGATTATTGTGAGCTGTACTTCAGATGATCGACGTGAGAAGCTGTCTCGATACAGGAACAAGAAGAGCAGGCGAAACTTCGGACGCAAAATCAAGTATGCTTGTAGGAAAGCTCTTGCAGATAGCCAACCAAGGATCCGAGGAAGGTTTGCCAAAACTGAGGAGAGGAAGTAG
Protein Sequence
- >A03p015720.1_BraROA
MYADSGLMISYMHNCPPDFQQIEDLFKSYKLSDDEMNNAFAKSTNITDYDLGEEGDLFKAPDPILEDPIVAVDPLSAALTMISCGEDSSQGLCELPDLGSLQSGQELLDKAFYECEQDLIMKSAMEPPFSDVLDVKNISLITNESQDLQKSVSSENLSSMGWSQNQEALVVQNFPDYSQLDFGYVNGMRRAFSEGDIQKLGTGHFQCPLDMIIVSCTSDDRREKLSRYRNKKSRRNFGRKIKYACRKALADSQPRIRGRFAKTEERK