Information report for A03p013400.1_BraROA
Gene Details
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Functional Annotation
- Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization.;Encodes a vernalisation insensitive 3‐like protein, a possible component of the PRC2 complex mediating H3K27me3 in target genes
Homologous
- Actinidia chinensis: CEY00_Acc12139
- Brassica napus: BnaA03G0112400ZS, BnaC03G0129200ZS, BnaA06G0406800ZS, BnaC02G0145400ZS, BnaA02G0118200ZS, BnaA01G0071400ZS, BnaA03G0516300ZS
- Brassica oleracea: Bo3g019340, Bo2g032410, Bo7g114310
- Brassica rapa: Bra006824, Bra020445, Bra011173, Bra010297, Bra024097
Sequences
gDNA Sequence
- >A03p013400.1_BraROA
TGCAAGCTGGTTCGGTAATAAGCTTTTCTTTGTTCGATGTTGTTGTTGGAAGTTTTTCATTCGGTGAAACAAAGAACCAATCCTCATTTTATTTTATTTTTATACACTATTATTTTTATTTTTAATATTCTAAAATTCTCAATGTTTTGTTCTTGTATGGCTCTTTTATAGAGCTCGAAGACCGAGTACTCCTGGAATCTATGTCTAGATGTTCATTTTATACATGTTCTTTAAGAGAATGAGAGCTTCATGGTTTTGCATTTTGGCTGTTTAAATATTTTAATTTTGGAATAAAATAATTTGAAAAATAAAAATCTGAGCTTTATCGATCCCTTGTTTTTTTCATAGAACTTTGTTGTGATGGGTTCTTAACTTTACATTATTTAACTTATGTTTTATTCTTTGTCGGAAAACTTATCTGCAGCTCTCAAAGATCTGGCGTTTTGATAGTAATGTGGGCCCAGAAGAAGACATGGATCCTTCTTCATTTCAAGGTACGAGTTCTTCTTCATGTCGACGTGAACGTCTTTTGTCTTCTCACTGTTCTACTTTCATGCGTTTATTGGTTGATGCTTTTAGTAGGTCGCTAACACGACGTCGTTTTAATTGTCGGAACTGTTTCATGTATGAACTTAAACGCTTTATTTCTCGCATTGGATTCGTCGTTCGTCGTCATTGTTGAAATTTTTGGTTCATGGGTTGTTGAGACTTATCGTTTTCGTTGACAAAGTTTTTAAACTTTGAATGATCTTTTACCCATTAAAAATCACAAATCGATCCCCCTTTTTGTTCTTCTTCCCACACTTGTTCTAGGGTTAAAGTGTTGTGCTTTTCCCTTTGCAGGTGTCGTGTGCACTGAGTTTCCTAAAAAGAAAGGTTTGAGTGTAAGCGAGAGAAGAGAACTCATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCGGAGCTTTTAAACTCGTGGAGCCGGGACGAGATAATGAAGATCATATGCGCGGAGATGGGTAAAGAGAGGAAGTACACTGGTCTTAACAAACCAAAACTCATAGAAAACCTACTGAACCTCGTCTCTCGTCCTCTCGGTGAAACCTCTTGTCTTGACCGTAAAAGCTCCAGGAGGAAGAGACAGAAGACGACAACTAGTTACATCATCTGCTGCGAGAATTTAGCTTGTAGAGCTGCGCTCGGAAGTGAAGATACCTTTTGTAGAAGATGTTCTTGCTGTGTTTGTCAGAACTTTGATGATAACAAAGATCCGAGTCTATGGATTGCTTGTGAGGGTTGTGGTTTGTCTTGTCATTTGGAGTGTGCTTTCAAGGAAGATGGGTATGGGATTGGGTGTAATGATGATGTAAGAGGTCTTGATGGTAGGTTTCATTGCGTGTTTTGTGGCAAAGATAATGATTTGCTTGGGTAAGATTCTTGTTAGTAATATGAAAAAGACATCTGTTTGGAGAGTGTAGTGTAATAATATGTGTGTGAACTTACAGATGCTGGAGGAAGCAAGTGAAAGTGGCTAAGGAGACTCGGCGTGTAGATGTTCTTTGTTACCGTGTTTCTTTAGGACAGAAGATGTTGAGAGGTACAAGGAGGTATCAGAATCTGTTGGAACTCATGGATGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTAGTGAGTTGGGAGATGAAGATGGCTCGAGGTATCGTCAATAGATTTGATTCGGGATCACAAGTTCAGAAGCTGTGCTCTCTTGCAATGGAAGCTCTTGACAAGATGGTCTCACCACCATCAGAATCTGTTTCAGGACAAGGTTAGTTTTCTGCTTAGACATTACTTTTGTTTTGAAGTGTGTTTTGACTTTAGTCCTTGTTAGGTGACAAGATGAGCGTGAGAGTAGAAGAGATTCAACCAAGATCAGTCAATGTGAGATTAGACTCCGAGGAGCCGTCTTCTTCTTCGCAAAACCGGATCACAGGTGTGAAGGATGATGGAGAGGAAGCAGGGAACATGCAACGCCATTTGACGAACTCTAGCAGTGGTCTTTGTAGTAGTAATCCATCTTTGGCTGAAGATGAATCCAACCATGTCAGTAAAAGCTGCTGCAAAGAAAATAGTGACAATAACAACGCTGAACACTGTAGTGCAGGAGAAGTAGAATCTGAGATTGAAGAGGAGAGGGTCTTAAAAAGGAAAGTCAACGAGATAGAGGGAAGAGACTTGTTTGTAATAACACCCTGCAAGAGAGACACATTTAAGGGCAAGCAAGGAGGGAATAAAAGATCCAAATCAAGAACATCAACCAAGAAACCTGAGACCAATGTAGCAGAAAATGGAGTAGGAGGAGATAAAGACTTGGGTCATGTAGTGAAGACCATTAGATGTTTAGAGCAAGAAGGGCATATAGACAAGAGTTTCAGGGAAAGGTTCTTGACATGGTATAGCTTAAGAGCTACTCATAGAGAAGTTAAAGCAGTGAAGGTTTTTGTTGAGACTTTCAAGGATGATCTGTCTTCTTTGGGACAACAGCTTGTGGATACATTCTCAGAATGTATACAGAGCAAGAGATCATCAACAACTGGTGTTGTACCTGCTGGAATCTGCCTCAAGTTCTGGCATTAA
CDS Sequence
- >A03p013400.1_BraROA
ATGCAAGCTGGTTCGCTCTCAAAGATCTGGCGTTTTGATAGTAATGTGGGCCCAGAAGAAGACATGGATCCTTCTTCATTTCAAGGTGTCGTGTGCACTGAGTTTCCTAAAAAGAAAGGTTTGAGTGTAAGCGAGAGAAGAGAACTCATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCGGAGCTTTTAAACTCGTGGAGCCGGGACGAGATAATGAAGATCATATGCGCGGAGATGGGTAAAGAGAGGAAGTACACTGGTCTTAACAAACCAAAACTCATAGAAAACCTACTGAACCTCGTCTCTCGTCCTCTCGGTGAAACCTCTTGTCTTGACCGTAAAAGCTCCAGGAGGAAGAGACAGAAGACGACAACTAGTTACATCATCTGCTGCGAGAATTTAGCTTGTAGAGCTGCGCTCGGAAGTGAAGATACCTTTTGTAGAAGATGTTCTTGCTGTGTTTGTCAGAACTTTGATGATAACAAAGATCCGAGTCTATGGATTGCTTGTGAGGGTTGTGGTTTGTCTTGTCATTTGGAGTGTGCTTTCAAGGAAGATGGGTATGGGATTGGGTGTAATGATGATGTAAGAGGTCTTGATGGTAGGTTTCATTGCGTGTTTTGTGGCAAAGATAATGATTTGCTTGGATGCTGGAGGAAGCAAGTGAAAGTGGCTAAGGAGACTCGGCGTGTAGATGTTCTTTGTTACCGTGTTTCTTTAGGACAGAAGATGTTGAGAGGTACAAGGAGGTATCAGAATCTGTTGGAACTCATGGATGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTAGTGAGTTGGGAGATGAAGATGGCTCGAGGTATCGTCAATAGATTTGATTCGGGATCACAAGTTCAGAAGCTGTGCTCTCTTGCAATGGAAGCTCTTGACAAGATGGTCTCACCACCATCAGAATCTGTTTCAGGACAAGGTGACAAGATGAGCGTGAGAGTAGAAGAGATTCAACCAAGATCAGTCAATGTGAGATTAGACTCCGAGGAGCCGTCTTCTTCTTCGCAAAACCGGATCACAGGTGTGAAGGATGATGGAGAGGAAGCAGGGAACATGCAACGCCATTTGACGAACTCTAGCAGTGGTCTTTGTAGTAGTAATCCATCTTTGGCTGAAGATGAATCCAACCATGTCAGTAAAAGCTGCTGCAAAGAAAATAGTGACAATAACAACGCTGAACACTGTAGTGCAGGAGAAGTAGAATCTGAGATTGAAGAGGAGAGGGTCTTAAAAAGGAAAGTCAACGAGATAGAGGGAAGAGACTTGTTTGTAATAACACCCTGCAAGAGAGACACATTTAAGGGCAAGCAAGGAGGGAATAAAAGATCCAAATCAAGAACATCAACCAAGAAACCTGAGACCAATGTAGCAGAAAATGGAGTAGGAGGAGATAAAGACTTGGGTCATGTAGTGAAGACCATTAGATGTTTAGAGCAAGAAGGGCATATAGACAAGAGTTTCAGGGAAAGGTTCTTGACATGGTATAGCTTAAGAGCTACTCATAGAGAAGTTAAAGCAGTGAAGGTTTTTGTTGAGACTTTCAAGGATGATCTGTCTTCTTTGGGACAACAGCTTGTGGATACATTCTCAGAATGTATACAGAGCAAGAGATCATCAACAACTGGTGTTGTACCTGCTGGAATCTGCCTCAAGTTCTGGCATTAA
Protein Sequence
- >A03p013400.1_BraROA
MQAGSLSKIWRFDSNVGPEEDMDPSSFQGVVCTEFPKKKGLSVSERRELIHALSKQPEEASELLNSWSRDEIMKIICAEMGKERKYTGLNKPKLIENLLNLVSRPLGETSCLDRKSSRRKRQKTTTSYIICCENLACRAALGSEDTFCRRCSCCVCQNFDDNKDPSLWIACEGCGLSCHLECAFKEDGYGIGCNDDVRGLDGRFHCVFCGKDNDLLGCWRKQVKVAKETRRVDVLCYRVSLGQKMLRGTRRYQNLLELMDEAVKKLEGDVGPLVSWEMKMARGIVNRFDSGSQVQKLCSLAMEALDKMVSPPSESVSGQGDKMSVRVEEIQPRSVNVRLDSEEPSSSSQNRITGVKDDGEEAGNMQRHLTNSSSGLCSSNPSLAEDESNHVSKSCCKENSDNNNAEHCSAGEVESEIEEERVLKRKVNEIEGRDLFVITPCKRDTFKGKQGGNKRSKSRTSTKKPETNVAENGVGGDKDLGHVVKTIRCLEQEGHIDKSFRERFLTWYSLRATHREVKAVKVFVETFKDDLSSLGQQLVDTFSECIQSKRSSTTGVVPAGICLKFWH