Information report for A03p003250.1_BraROA
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Brassica napus: BnaA03G0027400ZS, BnaC03G0033600ZS, BnaA02G0025400ZS, BnaC02G0027500ZS
- Brassica oleracea: Bo3g004300, Bo2g008600
- Brassica rapa: Bra005933, Bra028701
- Citrullus lanatus: Cla97C06G128240
- Glycine max: Glyma.06G162500, Glyma.04G203000
- Juglans regia: Jr09_00040, Jr02_00090
- Medicago truncatula: Medtr3g098420
- Prunus persica: PRUPE_5G139000
- Vitis vinifera: VIT_00s0283g00020
Sequences
gDNA Sequence
- >A03p003250.1_BraROA
TACCGGCGACCACCACCGGCAGGCTTTTTAGCCGGAGCAATGTCCTCATCATCTGATTCGACGTCACCGTACTGCCATATTCCAGTCCTAGACTTGCGAGCTTCCTCTTGGAACTTCTCCAAAGCATCAAGAGCAGCTTTTTTGTCCTTGTGCTCAAACCTCCTACGTTTCTCCATCCTCGCTATTCCTCCCTGTGTACATCATCCATCATCATAAACACCGATTCTTAAAACATGTTTTGTAAAGACAAGGTGAGAGAGAGAGAGAGAGACAAGAAACCAACCTGAAGCATTGCACCATTAACCGAGACCTCATCGTCGACAGCAATGAGAGTGACAACAAGTTCAGTTCCAGTGCCTTGTCCTTTGACTTTGCCTCCAGATGCGTCTCTTTCTTCTATCACTGCTTTGAACTCTTTGCCACTTCCCAAAGTTATTGTATGCAAATACTCTCCAGCTTCAGGACCAAAGTCTTCTTCCAAGCTTGGAACCTTAATGTAAGCAAGCCTGCAGAGCTGAGCAAGCCCTGGCGCTGAGGACACCGAAGGGTCCACTGGTCGGATTGCGCTGTAAGGGACTACCTCTTGGTTTCCATAATCGATGTAGAACACTTCAAACTTCTCATCTGGAGACTCAACAGCTGCACGAGGTGCACTCACAATCTGAATAAAAATAGGTAACGGTTAAACAAGTGATTTATTAAAGATTTCAATTTATATATATTTTTAAAATAAATGTTTATGTAATTTTTTTCAAAAAAATTAAGGACCGAGGCCAATGTTTCATTGGGCTTTGCTCAGGACCAGCCTGGAAGAAAACAAAATCACAGAAACTAAGAAAGTGGATTTGTATCTTACCATTGCACGGTTCCAGGAGTTGTCAAGGCTAAACTGTGCAAGGACAATGTCACCTCTCTTAGGGTTGAAGGAACCAATGATTGGAGCATCTTTAAGACTCAAAGATGCAAGCTGGTTCTGAATAGAAGCTACTCTCTGATCTCCAACCGTTTGAACATAGAACCGACCACCTCCAAGTACTTCAGTAACAGCAACCTTCAAAGTCTCCTTTTGTCTGGTCTCAACGGTTGTACTTCCGTTTGAGACTTCTTGTCCTTCAACATAGTTCTCCCAAACCTACAAAAGATCAAAAAGCGGTTTAGCAAGATGATTTTATTTTTGACTAAAAAGACATGTGTTGCTTGTCTCACCTTCAGTTTCTGATTCTTAGCAGATCTCTCTGCTTGTTCAAGTATATGTGCTTCAACAATCCTGTCTGCACCAAAGCTTGTCTGCATTTTTGCTAAGCCAGCTTCAAGCAGAACCGTCGCCACATTTGTCCTGGACTCCCACATTGATCCCAAGAATGTACCGGTTCTATCCACCGTCTCAACTTCAATCTATGTAGTTCATAACATAACATTATCAACACACCATATAGAACCAGAGAAAATTGAATTTAATATATTAAAAAAATATTAGAGGGAGGAAAGACTTTGAGCGTGAATAAAATATATACTTTAAAAAAACATATAGAACAAGAGGAAACTGTATAAAATATATAGGAGGGAGGAAAAGACTTTGAGCTTGAATAAAATATACTTAAAAAAAAAACAATATAGGCCAAGAGGAAACTGAGATGTAAGTTTGGTCTACGTACCTCAACATCTCTCTGCATGATCCTACGTCTCATTACAGAGATAGCTTCATCTGAAAAGGGCTCTCCACGGCCAGGGCATCTAACACCAGAGAACGCAAAGGCAATGCTACACGTTAGCTTCGGAATATAAAGCTTACACCTATGTCCGCTTAGTACATATTCCACAACAGCTGGTATCCTCCTGATTCTTTGAAGTGATGGCAAGAAATCTTTAGCTTTCTTAGCTGCGGCCACGGTTAGGTCTGTGATGTGCATGACAGGAGACTCTTTAGCAGAATGGATTCCTTTCTTTCCAGAGAGAGCACGAGATTCAGCAGCAAGAAGAGCATCATAATGGTTTGATCTCTCTTCAAAATCTCTGTGTCTAACCACATTTCCAAAACCACGAGATAGAAGAAGCTCAGCGATGTTCACTCCAGCTGGCTGGCTGCCAGAGATGGCTGATGCAGCCACTTCCTGGGTATCGCCTTTGGCGGGAGATGGAATGAACACTGAGCCAAAATCCATTATCCTATCACCAGCACCTGTTGGGGCAGCACCTTCTGCTGGTGTGACTTTCCTTGAGTATTCCATTTGAACAATAACCTTTACCAAAGAGAAAAAAAAACATCAAATATTGTTCATGTGTGGACACAAATGCAATGACAAGAGTAGTAAGTAATACTCTCTTGGTTTTATTTTAATTGTAGTTTTAGATTTGTGCACAAAGATTAAGAAAATATTTAATTTTGTATATTATCTAAAAATGGAAAATATAGTCATATAGTCATATAGCATATAAAGTTCATAAATTTTGCAAATTCTAAAACTGACACTTATTTTGTAACGAAAATTTTACTTTACAGTGAAAAAAAAAATTGAAAGGGAGGGAGTACCTGTTTGCCAATAAGCCTCTGTCTCAAGAACTCTCTTGCTTCACGAGCATAAGGAGCTGGCTTCTCTTCTCTACGTGGATTACCCATTTTAGGACATCTGATACTCGAAAGATTAACCCTTCTCTCTGCTGCTGGGCTCCCATATGGGATAGCATCATCAGCAACTACAATACAGTCCCCACTCACCACCTCCACTACCTAAAAAGAGATAATAAAACCAATGACTCAAAAACCAAAGCAAAGGAGAAAGACAGTACTCAGCCAAGAGAGATGTTTACCTTTCCGGTAAAGTTCTGGTCATGAAGTGCCTTAGAGTTTGTAGCTGGTGGAACATAGTTAGCCCACATTTTCACCTTATCTTTTTTGCATTTTAGCTCAGCAGCTTTCAGCTTTCTCTTGGCTTCCTCCTCCATCATGTTTGCACTCCATTCAACATATTTAGCAAGACCCTTAAAATTAAATAACAATCAATGTCATTAACTTTGTTTAAGAGTAGTTTTTACAACTAATATAAGCACATACATTTTCAACGAGCTCTAGCCCCAAGTCTTTAACTGCTTCCCCATCAGAGTAATGAACTGAACCAATCAGATTGTTGAACTTGTCAACGCCTTCAAGAACAATCCGAACCTGTAGAATGCAGTTTCGAGATTAAGATAGTCCAAAATGCCAAAAATAAAGATAAAAACATGATAAAAAAAAACTTACATCTCTGCTAAGAACACGGTGCTCAGTGAAGTACTTGGCTTCAGCTGCAAAAGGATCAGCAGAAACCTCCACAGACGATGCAGCTGCAGAGGCAGCAAGTCTCTGAGCTGACGTTAGAGGAGCTTTTGATGACTCACCAGAAGCATCTCCGCTGGACTCATCTGGAACCGTCTCAACAACGTTTCCATTTGTGTTTCTTCTTCCCATTGATGGAGACTACAATTGTCCGAAAGAAAACGTCTATAACTTTGTTGCATTTTAAAATGTCAAACAGGGAAACAAAGTTTATAATTCACCTGGATTCCAGCAACGAACACTTGCACAAACTGGAACTCTGGAAGAAGATAAACACGGATGCTGCTTCCATCGCGCACCTGCTCAACAATGCCTTCCATAGGCTTGCCTTTGTTGGCAGCCAACAGCCCCATGGCGTCAAAGCCTGCAGAGTCTCCAATGGCAGAAGGAGGGAGGTCTCTGATAGATGCCTCAGCAGCACCAGGAACCTGATTCACCATCAAATCTAATAATAAACTACATGATTTTGGGGAATATAAAGTTAAGGAGGAGGAAGACCAACCTTGCTCCAGCAACCAACTCCTTCTTGACTAGCCTGCTCTTGGAGCTGAAGCAGCTCTGTAATGTGAGTGGGACTAACCTTACCCTGATTCTGCTGACCTGGCTCCCTAACCTGCCCATAGTACAAGCATTAATAACAAACATAACTCAGTCAATATTGCAATATAATGGTTATTATAATCAATATTGAAATATAATGGTTGTTATAATAATCACCTTTGCCCAACCATTTTGAACAACAAGCTTTGCAACATTCTGGGTTCCAAGGAAAACAGAGCCAAATTCTCTTCCAGCAAGGGCTTCAACTTTGTATTCCACTCTGAAAGAAATTTCCTGTTCAAATAACAAAAAAAAAAGAAGAAGCATTTACTTTAGATCAAATAATATTATTCAACCACAATAATCACTGTTGTAATTAGTTAGCAAAGGATTTAGACTTTGGTACCTTTCCTATGCAAAGTTTCCTCAGAAACTCCTTGCTTTCCCATGCAAAAGGCTCATCCTTACCTCCCCTGCGAGCCTAAACAGAGCAAAAACCAATTAATTCAAGTAAAACAAAAAGGTTGTGAAGAAAGCTTTTTTGTCAAATACCCATTTCTGATAATTTTAATCTTAATTTAAACCTATTTAAAAATAAAAAAATAATGATTTTGGAATGTAGAGTAAAGCTCACCATCTTAGGTGCCATGAGGCAAGAGAGAGTGATAGCCTTTTCCGGTGGAGCTCCAGGTCTGTTGTGGACCAAAGTAATGATCACCAAACAGTCTCCGGAGGTAACAGCCTTCACTCTTCCTTTGAGCCATTGGTTCTCAGTCGCTGACGCCATCTTCACTGGCTTAAGACCTGCACCAACCACAATAAATACCCTTTTAACAAAAAAAAACAT
CDS Sequence
- >A03p003250.1_BraROA
ATGTTTTTTTTTGTTAAAAGGGTATTTATTGTGGTTGGTGCAGGTCTTAAGCCAGTGAAGATGGCGTCAGCGACTGAGAACCAATGGCTCAAAGGAAGAGTGAAGGCTGTTACCTCCGGAGACTGTTTGGTGATCATTACTTTGGTCCACAACAGACCTGGAGCTCCACCGGAAAAGGCTATCACTCTCTCTTGCCTCATGGCACCTAAGATGGCTCGCAGGGGAGGTAAGGATGAGCCTTTTGCATGGGAAAGCAAGGAGTTTCTGAGGAAACTTTGCATAGGAAAGGAAATTTCTTTCAGAGTGGAATACAAAGTTGAAGCCCTTGCTGGAAGAGAATTTGGCTCTGTTTTCCTTGGAACCCAGAATGTTGCAAAGCTTGTTGTTCAAAATGGTTGGGCAAAGGTTAGGGAGCCAGGTCAGCAGAATCAGGGTAAGGTTAGTCCCACTCACATTACAGAGCTGCTTCAGCTCCAAGAGCAGGCTAGTCAAGAAGGAGTTGGTTGCTGGAGCAAGGTTCCTGGTGCTGCTGAGGCATCTATCAGAGACCTCCCTCCTTCTGCCATTGGAGACTCTGCAGGCTTTGACGCCATGGGGCTGTTGGCTGCCAACAAAGGCAAGCCTATGGAAGGCATTGTTGAGCAGGTGCGCGATGGAAGCAGCATCCGTGTTTATCTTCTTCCAGAGTTCCAGTTTGTGCAAGTGTTCGTTGCTGGAATCCAGTCTCCATCAATGGGAAGAAGAAACACAAATGGAAACGTTGTTGAGACGGTTCCAGATGAGTCCAGCGGAGATGCTTCTGGTGAGTCATCAAAAGCTCCTCTAACGTCAGCTCAGAGACTTGCTGCCTCTGCAGCTGCATCGTCTGTGGAGGTTTCTGCTGATCCTTTTGCAGCTGAAGCCAAGTACTTCACTGAGCACCGTGTTCTTAGCAGAGATGTTCGGATTGTTCTTGAAGGCGTTGACAAGTTCAACAATCTGATTGGTTCAGTTCATTACTCTGATGGGGAAGCAGTTAAAGACTTGGGGCTAGAGCTCGTTGAAAATGGTCTTGCTAAATATGTTGAATGGAGTGCAAACATGATGGAGGAGGAAGCCAAGAGAAAGCTGAAAGCTGCTGAGCTAAAATGCAAAAAAGATAAGGTGAAAATGTGGGCTAACTATGTTCCACCAGCTACAAACTCTAAGGCACTTCATGACCAGAACTTTACCGGAAAGGTAGTGGAGGTGGTGAGTGGGGACTGTATTGTAGTTGCTGATGATGCTATCCCATATGGGAGCCCAGCAGCAGAGAGAAGGGTTAATCTTTCGAGTATCAGATGTCCTAAAATGGGTAATCCACGTAGAGAAGAGAAGCCAGCTCCTTATGCTCGTGAAGCAAGAGAGTTCTTGAGACAGAGGCTTATTGGCAAACAGGTTATTGTTCAAATGGAATACTCAAGGAAAGTCACACCAGCAGAAGGTGCTGCCCCAACAGGTGCTGGTGATAGGATAATGGATTTTGGCTCAGTGTTCATTCCATCTCCCGCCAAAGGCGATACCCAGGAAGTGGCTGCATCAGCCATCTCTGGCAGCCAGCCAGCTGGAGTGAACATCGCTGAGCTTCTTCTATCTCGTGGTTTTGGAAATGTGGTTAGACACAGAGATTTTGAAGAGAGATCAAACCATTATGATGCTCTTCTTGCTGCTGAATCTCGTGCTCTCTCTGGAAAGAAAGGAATCCATTCTGCTAAAGAGTCTCCTGTCATGCACATCACAGACCTAACCGTGGCCGCAGCTAAGAAAGCTAAAGATTTCTTGCCATCACTTCAAAGAATCAGGAGGATACCAGCTGTTGTGGAATATGTACTAAGCGGACATAGGTGTAAGCTTTATATTCCGAAGCTAACGTGTAGCATTGCCTTTGCGTTCTCTGGTGTTAGATGCCCTGGCCGTGGAGAGCCCTTTTCAGATGAAGCTATCTCTGTAATGAGACGTAGGATCATGCAGAGAGATGTTGAGATTGAAGTTGAGACGGTGGATAGAACCGGTACATTCTTGGGATCAATGTGGGAGTCCAGGACAAATGTGGCGACGGTTCTGCTTGAAGCTGGCTTAGCAAAAATGCAGACAAGCTTTGGTGCAGACAGGATTGTTGAAGCACATATACTTGAACAAGCAGAGAGATCTGCTAAGAATCAGAAACTGAAGGTTTGGGAGAACTATGTTGAAGGACAAGAAGTCTCAAACGGAAGTACAACCGTTGAGACCAGACAAAAGGAGACTTTGAAGGTTGCTGTTACTGAAGTACTTGGAGGTGGTCGGTTCTATGTTCAAACGGTTGGAGATCAGAGAGTAGCTTCTATTCAGAACCAGCTTGCATCTTTGAGTCTTAAAGATGCTCCAATCATTGGTTCCTTCAACCCTAAGAGAGGTGACATTGTCCTTGCACAGTTTAGCCTTGACAACTCCTGGAACCGTGCAATGATTGTGAGTGCACCTCGTGCAGCTGTTGAGTCTCCAGATGAGAAGTTTGAAGTGTTCTACATCGATTATGGAAACCAAGAGGTAGTCCCTTACAGCGCAATCCGACCAGTGGACCCTTCGGTGTCCTCAGCGCCAGGGCTTGCTCAGCTCTGCAGGCTTGCTTACATTAAGGTTCCAAGCTTGGAAGAAGACTTTGGTCCTGAAGCTGGAGAGTATTTGCATACAATAACTTTGGGAAGTGGCAAAGAGTTCAAAGCAGTGATAGAAGAAAGAGACGCATCTGGAGGCAAAGTCAAAGGACAAGGCACTGGAACTGAACTTGTTGTCACTCTCATTGCTGTCGACGATGAGGTCTCGGTTAATGGTGCAATGCTTCAGGGAGGAATAGCGAGGATGGAGAAACGTAGGAGGTTTGAGCACAAGGACAAAAAAGCTGCTCTTGATGCTTTGGAGAAGTTCCAAGAGGAAGCTCGCAAGTCTAGGACTGGAATATGGCAGTACGGTGACGTCGAATCAGATGATGAGGACATTGCTCCGGCTAAAAAGCCTGCCGGTGGTGGTCGCCGGTAA
Protein Sequence
- >A03p003250.1_BraROA
MFFFVKRVFIVVGAGLKPVKMASATENQWLKGRVKAVTSGDCLVIITLVHNRPGAPPEKAITLSCLMAPKMARRGGKDEPFAWESKEFLRKLCIGKEISFRVEYKVEALAGREFGSVFLGTQNVAKLVVQNGWAKVREPGQQNQGKVSPTHITELLQLQEQASQEGVGCWSKVPGAAEASIRDLPPSAIGDSAGFDAMGLLAANKGKPMEGIVEQVRDGSSIRVYLLPEFQFVQVFVAGIQSPSMGRRNTNGNVVETVPDESSGDASGESSKAPLTSAQRLAASAAASSVEVSADPFAAEAKYFTEHRVLSRDVRIVLEGVDKFNNLIGSVHYSDGEAVKDLGLELVENGLAKYVEWSANMMEEEAKRKLKAAELKCKKDKVKMWANYVPPATNSKALHDQNFTGKVVEVVSGDCIVVADDAIPYGSPAAERRVNLSSIRCPKMGNPRREEKPAPYAREAREFLRQRLIGKQVIVQMEYSRKVTPAEGAAPTGAGDRIMDFGSVFIPSPAKGDTQEVAASAISGSQPAGVNIAELLLSRGFGNVVRHRDFEERSNHYDALLAAESRALSGKKGIHSAKESPVMHITDLTVAAAKKAKDFLPSLQRIRRIPAVVEYVLSGHRCKLYIPKLTCSIAFAFSGVRCPGRGEPFSDEAISVMRRRIMQRDVEIEVETVDRTGTFLGSMWESRTNVATVLLEAGLAKMQTSFGADRIVEAHILEQAERSAKNQKLKVWENYVEGQEVSNGSTTVETRQKETLKVAVTEVLGGGRFYVQTVGDQRVASIQNQLASLSLKDAPIIGSFNPKRGDIVLAQFSLDNSWNRAMIVSAPRAAVESPDEKFEVFYIDYGNQEVVPYSAIRPVDPSVSSAPGLAQLCRLAYIKVPSLEEDFGPEAGEYLHTITLGSGKEFKAVIEERDASGGKVKGQGTGTELVVTLIAVDDEVSVNGAMLQGGIARMEKRRRFEHKDKKAALDALEKFQEEARKSRTGIWQYGDVESDDEDIAPAKKPAGGGRR